Array 1 108633-114335 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFPR01000513.1 Acidiphilium sp. PM Ctg_00689, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 108633 29 100.0 32 ............................. ATTGACGGACTCAAGGAAGTTGCCCGCACCTG 108694 29 100.0 32 ............................. GCATGCCGCGCTGATGCGACGGTCCCATTCGT 108755 29 100.0 32 ............................. GCCGATTAGTGCGATTCTGTTTTCAACGGAAG 108816 29 100.0 32 ............................. TTGAGCACGATGACGGTGCCCTGCGCGGTCGT 108877 29 100.0 32 ............................. GCGCGCAAGCGCAAGGGCAACAGTGGCACGCA 108938 29 100.0 32 ............................. CGCAATTTTCGTCCCATCCCTCGGCGCGGTCT 108999 29 100.0 32 ............................. ATCGCCCGACATAGATCATGCGGGCGCAATGC 109060 29 100.0 32 ............................. GTTGGGGGCAGCTTCCTCGAACGTGAAATAAT 109121 29 100.0 32 ............................. GCCGAACGCGACCGGAAACACGAGGAGGAACT 109182 29 96.6 32 ............................T GCGATCAACGCGATCAATGCGGTTGTTTCAAA 109243 29 100.0 32 ............................. GCATGAGCACGGTGGTCGCGCCGCTGCTCCTC 109304 29 100.0 32 ............................. GCGCCACAAGGGCGCTTTTGTCTGGGAAGGAT 109365 29 100.0 32 ............................. GCACTGCGGCGCTTACGATTGCTGCGCCCGCT 109426 29 100.0 32 ............................. CAGGATGTATGCGCCGTGCTGCTCGGCTGTGA 109487 29 100.0 32 ............................. GTTCACAATGGGAGTGGACGCTTCCATCGTAC 109548 29 100.0 32 ............................. CGCATTCGCGTCGATGCGCGGAAATGGCTGGT 109609 29 100.0 32 ............................. CCTCAGCCCGACCCGGTGACGTTTCCACACGA 109670 29 100.0 32 ............................. AAATTCGGCTTTTCTGCCACGTTGGCGCTCAA 109731 29 100.0 32 ............................. GTCACGGGTCGCCGCCTCCGGAAACCGCTCCG 109792 29 100.0 32 ............................. AAATCCCCGATGATAAGATCGGTTTCACAATC 109853 29 100.0 32 ............................. CAATGGAAGCCGAATGACCGTTCTCATCACCG 109914 29 100.0 32 ............................. AGCGATCCGCCGACGTGGAGGCCGTCCGGCAG 109975 29 100.0 32 ............................. GAACCGGCCGAGGTCGAGGAACAGGAGCAGAT 110036 29 100.0 32 ............................. CTGAAATTCCTTCGCCTGCGCGGCGTGCATCC 110097 29 100.0 32 ............................. GACAGCCGGACGGTGCTCGAGGTCCGGCGCAA 110158 29 100.0 32 ............................. AGCTTGCCCGCTCGCTGCAGCGCGACGCCAGG 110219 29 100.0 32 ............................. GCTCCTCGGTCAGGTTCGAGACCGCCTCGGTC 110280 29 100.0 32 ............................. TGATGCCGACGCGCCTCAACAACCCGTCGCAA 110341 29 100.0 32 ............................. CCGATGTCGGATCGGAGCCCGGGCCTGCGGCG 110402 29 100.0 32 ............................. GTCGCTTAGCCGCGTCGCACGCAAAGACGTGC 110463 29 100.0 32 ............................. TTTCAAAACGTAGGGGTTTCCATCATCATCCT 110524 29 100.0 32 ............................. CGGACCATCCGGCGATGGGAGACGGGCGAACA 110585 29 100.0 32 ............................. TATAGGCGGAGTCGGACAACTTTGGGCGTCGG 110646 29 100.0 32 ............................. CTGACGGGGCAGGCTGACGGTCCGTATGACGA 110707 29 100.0 32 ............................. TAAAAACGGAGATTTAAAATGCCCTACTGTGT 110768 29 100.0 32 ............................. GCTCGATATTTGAGCATTCGTCTGCGCCCCTA 110829 29 100.0 32 ............................. ATCAGCGGGCGCCGGGCGACCTGGCGCTGATG 110890 29 100.0 32 ............................. GAGGCGTTGATCGCATACGCGAGCGCCTGCAT 110951 29 100.0 32 ............................. CGTCAGTGCGGTCGTGGTGCCGAGAAACGCAT 111012 29 100.0 32 ............................. CGACTGGTATTCGCGGAGCCATGCTTCGGGCG 111073 29 100.0 32 ............................. GGCTGCGGCTTCTTGGCCTGCGCATGCAGGAA 111134 29 100.0 32 ............................. AGGAGGCTCGCCGAGTTCCCGCGCCCGCTTGT 111195 29 100.0 32 ............................. AATTCGGCCGGATTGCTGAACCCGAGCAGTCG 111256 29 100.0 32 ............................. ACAATGAAGCGGGCGATGGCCTCGGCCATGAA 111317 29 100.0 32 ............................. CCCGCAGCGGATGGGCCGCGATACAAAGCTAT 111378 29 96.6 32 ............................C TTCGCGTTCTGGCCGGCGTAGGCTTCGGTGAC 111439 29 100.0 32 ............................. CCGCGCATCTACGGCGCAGGCATCATGGTCAC 111500 29 100.0 32 ............................. CCCTGAAAATGCTGCAGCAGGGCGACCCGGGC 111561 29 100.0 32 ............................. CACCCGCAGGACCGCGAGCCGTGCCCATTTCC 111622 29 100.0 33 ............................. GGCAATCTGGACCGGGGACATCGCGAACTGGAC 111684 29 100.0 32 ............................. ACCAACACGAACACGATCACGCTGGCGGACGC 111745 29 100.0 32 ............................. TGTCATGACGAAAGTGTCGGTGGCGAGGTTGA 111806 29 100.0 32 ............................. TCGCAGCGCGGTTCGTCGCGGCGGGCGGCCAG 111867 29 100.0 32 ............................. GTCGAGAGGCTGGCGCGCCCGGTGCTTGCCAG 111928 29 100.0 32 ............................. CGACAAATATTTCGCTGGGGCTGGCGCTCGAT 111989 29 100.0 32 ............................. CCGAGGATGCGCGGCGGCGGCGTGCTTCGGCG 112050 29 100.0 32 ............................. CTGGGCGTCTCGGTCGAGGCGGTGAAGCGGGC 112111 29 100.0 32 ............................. CGGATTGCCGCCTGCGCTCGTCCACGCGTTCA 112172 29 100.0 32 ............................. GTCGAGAATCTGCTCCTGTTCCTCGACCTCGG 112233 29 100.0 32 ............................. CGTAGGATTGAACCCGTAGTTCTGCTCATTCG 112294 29 100.0 32 ............................. TCAGAATTTACGGTAATGTCTACCATGTAGAT 112355 29 100.0 32 ............................. TGTCGAATGATATCGTAGGGTATAAACCATGC 112416 29 100.0 32 ............................. CATCACAACAAGCGCGGGGTAGTCAATCCGCG 112477 29 100.0 32 ............................. GGTTTGAGGGCAGTCAGGTAGCGCAGGGGCAC 112538 29 100.0 32 ............................. GATACGAAATCGGACCGGGCGCCAGTCTTCGC 112599 29 100.0 32 ............................. CGGACCGTGTCGGTTGCCTGGCAGACGGTCGC 112660 29 100.0 32 ............................. ACGAGTATTTCCCGTTGCTTGTCGTTCATTTC 112721 29 100.0 32 ............................. CGGCCTGAATCCGAATGCGGTGAATTCTGCCA 112782 29 100.0 32 ............................. AGCTCGTCGGCCTTTTCATTCCCGCGCAGGGG 112843 29 100.0 32 ............................. ATTAATATCGCGCGAAATAGCAGAAACAGTGT 112904 29 100.0 32 ............................. CCTCTTGATTCTTCCACCATTCCTTCGCGCCC 112965 29 100.0 32 ............................. TCGCGGTGCAGATCAATTCCATCTCCCACCGT 113026 29 100.0 32 ............................. CTGTCGCACCACACGGCGTGATAGCCCCATGA 113087 29 100.0 32 ............................. AGATGATCAATACGCCGGTGTTTTGGGTATTT 113148 29 100.0 32 ............................. AGAGGTTTCTGATAATGGCTCGTTATTTGTGG 113209 29 100.0 32 ............................. ACAAGAATTTCAAAGGTCTTCAGGACTATTTC 113270 29 100.0 32 ............................. GAGGACGCGCCGGAGGCCGTTCCCGCACCCGC 113331 29 100.0 32 ............................. GATCTCCGCACTGCTGGCCGGGATCTCCAGCA 113392 29 100.0 32 ............................. ATCGAGATCGACCCCTTTGGCGACATCCTTTT 113453 29 100.0 32 ............................. ACGAATTTGCATGAGAAGCGGCGAACTTAGAA 113514 29 100.0 32 ............................. TCCAGCGTCCAGCAGGAGTGCACCCCCAGAAG 113575 29 100.0 32 ............................. CGGCCTTCCGTCAAATCAGGGTCCTTCAATCG 113636 29 100.0 32 ............................. ATCGGTGCCGTAGTCGAATGAGGTTCCGTTAA 113697 29 100.0 32 ............................. GATAGACCGGGATATGGTCATCCGCCCGCCTT 113758 29 100.0 32 ............................. TAGCACGCGATGTATGCCACAAGTGGGAACGG 113819 29 100.0 32 ............................. GATCAGCAGCACAAAGAATGCGTATTCCCAAA 113880 29 100.0 32 ............................. GTCTGATTCTCTCGCAATTGCGATCTCGCCAT 113941 29 100.0 32 ............................. CCATCGTTTCTGCTACCGGCTTTCCCGAGGCG 114002 29 100.0 32 ............................. TTCTGAGTCGGAACGACTTCGGGGCCTGTCAG 114063 29 100.0 32 ............................. TTCTGGAGAGTGTGCCGAGTTCTTCGATCCCC 114124 29 100.0 32 ............................. ACGGGAGGGCCAATTCGGCAACGCCAAACAGG 114185 29 100.0 32 ............................. GTTTTTGATCGTCACAGAAAAACGCTGGATTG 114246 29 100.0 32 ............................. CGGGCGCAATCAATTCGCCATGCGCTTTGAAC 114307 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 94 29 99.9 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : ACAAATGTACTCGCACGCATCATTCCCGCTATCGAGGATGTGTTGGCAGCCGGCGGCTTGGCAGTGCCAGAGGCGCCCGAAGAAGCGATGCCCGTTGCTATACCACCACCGGAACCGACGGGTGATGCTGGTCATCGTGGTTGAGAACGCGCCGCCGCGTTTGCGAGGCCGACTAGGTGTCTGGCTTTTGGAAGTTCGAGCAGGCGTTTATGTAGGAAACTATGGGCGCAAGGTTCGCGAGATGCTTTGGGAACAGGTCCGTGGCGCCATTGGTGACGGCAATGGCGTTATCGCCTGGACTTCTCCAAGCGATGCTGGGTTCGAATTCGACACCTGTGGCAAGAACCGCCGAGTGCCTGTCGATCTCGATGGATTTCGCCTTGTAGCCTTTACGGAGGAGGCGGAAACTGCTCCTCCCTTACACACAGGCGAGCCCCGCCACCGTCGGTAGTTCTTTGACATTGTGAATTCATTAGTTAAATCAGATCTTTACAGGAAGA # Right flank : TATTCTGGCGCCCGTCATCACGGCGGCGAGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //