Array 1 249205-251912 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFCMQ010000002.1 Klebsiella pneumoniae strain 1509e NODE_2_length_436765_cov_20.756402, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249205 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249264 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249325 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249386 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249447 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249508 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249569 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 249630 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 249691 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 249752 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 249813 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 249874 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 249935 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 249996 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 250057 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 250118 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 250179 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 250240 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 250301 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250362 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 250423 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 250484 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 250545 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 250606 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 250667 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 250728 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 250789 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 250850 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 250911 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 250972 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251033 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251094 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 251155 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 251216 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 251277 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 251338 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 251399 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 251460 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 251521 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251582 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 251643 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 251704 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251765 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251826 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 251884 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //