Array 1 23448-24076 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAWF010000141.1 Aggregatibacter actinomycetemcomitans strain SL7470 2435, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 23448 33 100.0 34 ................................. ATTTGGTCGGCAAGAGAATCCGCCAGGGCTAACT 23515 33 97.0 32 ................................C TGCTACAAAGAAAGCGCGTTACACCGCACTTT 23580 33 97.0 33 ................................T TTTGATTTTAAGTATTCGTAAGCCACATACAAT 23646 33 100.0 34 ................................. CCTGCCTCTGCCATCTTGCGCAACTCACCACGGG 23713 33 97.0 32 ................................C TCAATGGGCTGAAAAATTTTAAGAGGGAACAG 23778 33 97.0 33 ................................C AAAATCGCAAATCCCCGACGCCTGCGCAAATGA 23844 33 100.0 34 ................................. CGTTGTGCAAGGCGATTTACGAAAATACGAAACA 23911 33 97.0 33 ................................A TTGTTTTCAAGCTTGAAAGCGACTGTCACCTCG 23977 33 93.9 34 ...........C....................T GATTGTTAGCTAATGCCACAACATCAGCCCCGTT 24044 33 78.8 0 .T..T...C..C...C.A..A............ | ========== ====== ====== ====== ================================= ================================== ================== 10 33 95.8 33 GCAGCCACTTTTGGGTGGCTGTGTGTTGAAACG # Left flank : ATGATTTTGAACAGACTGTATTGCCCATTGGTGCAGGGCTACTGTTAGTCGTAAAAAATAACCGTTAACTGTAGATTGGGTTGCGACATTCTGTTTAATTCAACTTACAAATGCTTTTAGTCACTCCGAAAACCGATTGGTTAAAAACAAAAAGTGCGGTCAAAATCCAAGTCGTTTTTAAACTATACGGAAACTGCAATATATTCCCTGCATTATTCCATCAGGCACATTTTCTATTTGGGGAAATGTTGTTGGGTTACCATTTTTATGGTATTAACGGCGTACCTTCAATGATGTGCTTGTTATTTAGTTCGCTAATCCATAGTTCTCATCAAATTCCTGGTAGGCTAGCGATCCTTATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACAGCATGCCCGTTATACTTATCTCACTCCCTATTTTAAATAAGTTAGCGAAATGAAGTAAGTAATCTACTGATTTTCCTTGTTTTTTCGTATAGGGA # Right flank : GGGAAACTCTTGTTACACCTGAACTTTGGTACCAACTAAAGCACCTTAATCCAAGGTGCTTTTCTTTTCCCGCACACCAATACAAAACCCCTTGCCCTTGCCCCGCAAAATATATAGACTGAACCCCGTTATTAGTCGGGGTGCTTTGTGCTGAGATGATACCCGTGAACCTGATACAGTTAATACTGGCGTAGGAAACTAACAGAGAATCATATTTCCTTTCTTTTTCTCTTCTTCTCTTCATCGTCATTATTGCTGATTATCTTTTTTCATCGAAAAGGAAAAATTATGCAATATGGTTTTTGCCGCCCTGTGCCGGTAAATGGCGGAGGGCATTATGAGTAAGGTTGCGAGCGTTGACTATCGCCGGTTAGGACAGCGGCGGCGGTGCATGTCGTTTGGTTCATCGGTGACCGTGCAAAATACCTTGAACATGGTTGATATTTATGCCGTGTCACTCCAAACCATCCAATGTCAGCTGAAAGCCATTGTGACAGATT # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCACTTTTGGGTGGCTGTGTGTTGAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.40,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 21128-22158 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAWF010000135.1 Aggregatibacter actinomycetemcomitans strain SL7470 2429, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 21128 33 97.0 36 ................................A TAGTTTACCCCTATAAGTTGACTTGATAACCCTGAC 21197 33 97.0 32 ................................A TTTCATCTCCAAATTAAGCCCCGCGAGGGGCT 21262 33 97.0 33 ................................A TCGCTTCCAGTTGCTCGGTTGCGGTCATTGTCG 21328 33 97.0 33 ................................T AAGGAGTACATATGCACTGGAGCAGACCGCATT 21394 33 100.0 33 ................................. ATAATTGCACACTAAAGCTCTGGTCGGTAGAGA 21460 33 100.0 35 ................................. GGCAGGCAGTCTGCGGTCATGACCAGACAAACTTG 21528 33 97.0 34 ................................T GCCAGGTTGACACCCTCATAGCGTAAAAACAGAT 21595 33 97.0 33 ................................T ACCTGATCCAGCCCCACCATAAATTAATGCTTT 21661 33 100.0 32 ................................. AGATAACCCAATCATCCGTAATGATTTCGTAA 21726 33 97.0 33 ................................A TATTTAATCTCCTGCCGCCGGTTAATAGTCTAT 21792 33 97.0 33 .....................A........... ATTTTTATATCTCCTGCCGCTTGTTAATCATTT 21858 33 97.0 35 .....................A........... CCGTATGATGATCCTAGATGGTTTACTTATAAGCA 21926 33 93.9 34 .....................A..........T AAATTAGATCATCAAATAAATGACCTAAAAGCAC 21993 33 100.0 34 ................................. AGATTGCGGAATCTATGCTCAATCTACATGCGGC 22060 33 93.9 33 .....................A..........A CATAGCCTATTGAGTCCATCGCAGGTCTTGGCG 22126 33 75.8 0 .....T..T...G....A..A....C.....TT | ========== ====== ====== ====== ================================= ==================================== ================== 16 33 96.0 34 GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACC # Left flank : TTGATGAGGTGAAAAATGTTAATGTTGATTACCTATGATATTTCTTTAGGAGACTCGGAGGGGCAAGCCAGGTTGCGCCGTATTGCGAAGCATTGCTTGGATTATGGCGTACGGGCGCAGTATTCGGTGTTTGAATGTGATGTAACGTCGGATCAATGGGTAAAATTGAAGGCTAAGCTACTAGCGACTTATGATCCGGATTGTGATAGTTTGCGCTTTTACCATCTAGGCAGCAAATGGCGGCGCAAAGTGGAGCATCACGGGGCGAAGCCGGCGGTGGATGTGTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACCCCTGGTTCTCATCAAATTCCTGCTGAGCTAGCGATCCTTGTTTTCTTTAACAATTTGGAATAGTTAATTCATTTGTATAACGACGATATGCCCGTTATACTTATTCCACTCTCTATTTTGAAATAAGTTAGCGAAATGCAGTAAGTAATCTACTGATTTTTCTTATTTTTTCATATAGGGA # Right flank : TACTTGGTATACGCTTTTTATGAGCATTTAATTGGTTAAAAATATATGAGCTTGTTGCCTAATGGTAGGGCAGCGTTTAACAAAACGCTCTGTGCGAGTTCGATACTCGCCAAGCTCACTATTTATTGACCTGCACAATTTTATACAATCCTTTCTCAATTTTATTCAACATACCGGTAATCCCAAAAAAACACCCCAAAAATCGACCGCACTTTTTCCCCATAAAATAAAAAAGCTGAATCTCTCTAGATCCAGCTTTTCTTTTACCTATTTATTGCGCTAATTCAGCACGTAATTTTTTCGTGACGTCAACCATGACTTTCAGTTGTTCGAGGGTTTCTTTCCAGCCTCGGGTTTTTAGACCGCAATCCGGATTCACCCATAAACGCTCTTTTGGCACAACTTGTAACGCTTTGCGTAGCAAGTGTTCGATTTCGGCGGCGGTTGGCACGCGTGGGCTATGGATATCGTACACGCCCGGGCCGATGTCGTTCGGGTAT # Questionable array : NO Score: 5.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACC # Alternate repeat : GCAGCCACCTTCAGGTGGCTGAGTGTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.40,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 8027-2235 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAWF010000149.1 Aggregatibacter actinomycetemcomitans strain SL7470 2443, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8026 28 100.0 32 ............................ ACTCCAAAACCTCCATTTCCCCGTCGTTGCAG 7966 28 100.0 32 ............................ TTTGAAGATATATCAATTTACACAAGAAATAA 7906 28 100.0 32 ............................ GTTAATCAAGAAAAGGATAATGTTGCTAATTT 7846 28 100.0 32 ............................ AATCAGCACGAGTATTCGTGGTGCGGTAACTG 7786 28 100.0 32 ............................ ACCGAATGCTGCACCTGAAGAACAATCAAGGC 7726 28 100.0 32 ............................ CGTCAGTATAGGCATCAGCAATGTAACTAAGT 7666 28 100.0 32 ............................ TCACGAGTAATTCAACATGGGGGAACGCCAAT 7606 28 100.0 32 ............................ TTATATCTTTTACCTTTAAAGTGTTCATATAT 7546 28 100.0 32 ............................ TTTGGGGACAGCAAAAGAAATAAAGCATGACT 7486 28 100.0 32 ............................ AGCCACAGTATCACCGACCATGGGCGACCATT 7426 28 100.0 32 ............................ TTTATTCTCAAATATTTTATATACATCTTCTC 7366 28 100.0 32 ............................ ATGAACGAAGCAGAACAAAAAGCCGCCATTGA 7306 28 100.0 32 ............................ AACTATCAATAAGTGTAGGAATTATAATTGAT 7246 28 100.0 32 ............................ GATTTACGCGATTACACCGAAGCCGAAAAAGA 7186 28 100.0 32 ............................ AAATCATCCGAGTAAGAACACCAAGTTACACC 7126 28 100.0 32 ............................ AAGTGAAGTTTTTCTTAAAATGCCGAGTTATT 7066 28 100.0 32 ............................ ATCTCCATCATTATCACCTTTGCCATTACCAA 7006 28 100.0 32 ............................ ACCGACGGCGCAGGCGGTGCGGGCAATATCAC 6946 28 100.0 32 ............................ ATGAGCCTTTCATATCTGCCGCGCGGGCGCGA 6886 28 100.0 32 ............................ TAATCAAAAAGGCAATGCCGAAAATCAAATGG 6826 28 100.0 32 ............................ GGCAAAATTAGCGACTTCTTTAGTAAACGCCT 6766 28 100.0 32 ............................ ACACACGCGAACCATAACCATAGAGCGCTGCT 6706 28 100.0 32 ............................ ACATTTACCGCACTGCAAAAACACGGTAAAAA 6646 28 100.0 32 ............................ TCATAAGATTTACCGCTACCCGGTATGCCAAC 6586 28 100.0 32 ............................ TTGGTGGCGAGGTGGTTTCTTATTATTCCGGG 6526 28 100.0 32 ............................ TTAACAATCCCTGTTAAGACCGATAAATATTA 6466 28 100.0 32 ............................ CGAATGCAAGCCGATTGGTTTACGCAACGCCA 6406 28 100.0 32 ............................ TTAGTAAGAGGGAATTTATTTTCCCCGACAAA 6346 28 100.0 32 ............................ ATTCTAAATTTTCGGTCACGGATTCGGACCAA 6286 28 100.0 32 ............................ AGTATTTTGAGAGCGCGTTATATGCCTATGGG 6226 28 100.0 32 ............................ TACCGCGTTTTTCTAAAGCCGCGAATGACGGA 6166 28 100.0 32 ............................ GCTTGCAACTGCAAGAGCACAACGGCTGGTCT 6106 28 100.0 32 ............................ CCACAAGTTTTCGGCGTTTAATTTACCTTTGA 6046 28 100.0 32 ............................ GTCACAGTTAGCTTCCGCGGTGTGCGTGATGA 5986 28 100.0 32 ............................ TCAGCGTCGTCGTACACCTCAGCGTCGTTGTA 5926 28 100.0 32 ............................ GTTAGCACGTCGGCGGGGCATTGGTAAGGTTT 5866 28 100.0 32 ............................ TGAACCGACGTGGCAGGACTGGGCGGATGAAC 5806 28 100.0 32 ............................ GAACCGACGTGGCAGGACTGGGCGGATGAACA 5746 28 100.0 32 ............................ ACTTAGTAGAACAATCCACATTCAGCAACATT 5686 28 100.0 32 ............................ TGCGATTTCTAAAATCTGGCGCGGCTGAATAC 5626 28 100.0 32 ............................ GTGTTGTTGCAAAATTTCCTGAATTGACTTCC 5566 28 100.0 32 ............................ TTTTTGATTCGGGCTGCCGGGTTGTTCAAGCG 5506 28 100.0 33 ............................ CGCCGGTACCGAGTTACCGCGAACCAGGTTTAA 5445 28 100.0 32 ............................ TAGACCTATCGCTAGAGATTCAGCTCACAGAA 5385 28 100.0 32 ............................ ATGTTGGATCGGCTATGTAAAATGCCGCTATG 5325 28 100.0 32 ............................ ATTGCCACATTGTTTTGTAAGCCAATCACCAG 5265 28 100.0 32 ............................ AAGTATATCGGGCAAATCTTCGATGATTAAAC 5205 28 100.0 32 ............................ GTCGGCAAAATCCACCGCGTCTTTGTCTTTTT 5145 28 100.0 32 ............................ AAGCTCTGCAAAGTGATGTCCGTTAGCGACTA 5085 28 100.0 32 ............................ ATAGAGCGCTGCTTCAAAGTGCTGGCGCTCAA 5025 28 100.0 32 ............................ GGTAGCGCGTCTGTATCGCGGACTGCCGCCAA 4965 28 100.0 32 ............................ TTACGCGATGTACCCAGCCAATACATCCAGAT 4905 28 100.0 32 ............................ ACTGAAGCGGGGCGCTTCAAAGTACAAAATTT 4845 28 100.0 32 ............................ GTTAACGGTTAGCGTTGTGCGCGGGATGATGC 4785 28 100.0 32 ............................ AATGCCGTCATGACCGGCGCGGCATATTTCAT 4725 28 100.0 32 ............................ CACTTAGAAAATACGTCGGAATTAAAGTGACA 4665 28 100.0 32 ............................ CAAGGCACAACCCTCAAAATCGGCACAATCTA 4605 28 100.0 32 ............................ AGACTGATTAAAACACTGGATAACAAAACTGG 4545 28 100.0 32 ............................ CACCAAAAAAGCAAAGTAAGCAAGCAAAAAAA 4485 28 100.0 32 ............................ TACGACCGCGCGTTTGAGCTTGATTTTACTCG 4425 28 100.0 32 ............................ ACATGAAAAAAAATGCAAAAGCACTTACCGTA 4365 28 100.0 32 ............................ ATAACGTGCCGGTAATAACTTGTTGAGATGAT 4305 28 100.0 32 ............................ ATTGATTCCGGCTCTGAATTTCTTCGCTTACC 4245 28 100.0 32 ............................ TGACGGGCTGAAAGTGATCCCAATTGGGGACA 4185 28 100.0 32 ............................ TTTACCCATCTCACGCCTCCAACCGATACTGC 4125 28 100.0 32 ............................ ATGCAATCGTGTTATTTTTATCAGCAATAATC 4065 28 100.0 32 ............................ ATGGTCTCCGACAATCCTGCCGATACTAATTG 4005 28 100.0 32 ............................ TTGGGGCAGGTGGTGATGTCTAATCCCAACGT 3945 28 100.0 32 ............................ GAAAATATCTTTCAGCACGACGGCGCGTTCAC 3885 28 100.0 33 ............................ CTCTTGTGTCTGTTGGTTGGCGATTTCTAACTT 3824 28 100.0 32 ............................ TTTTCCAGTTGGATTTTTCTTAGTTCGTATTC 3764 28 100.0 32 ............................ GATGGGGTGCTACAAGCCTACGAACAGCAAGT 3704 28 100.0 32 ............................ AACCGCGAAGACCAGGCGATAGCCAACAATAT 3644 28 96.4 32 ........T................... AATAGCGAATAGCTCGCTGAATCGAGTTATAA 3584 28 100.0 32 ............................ ATCAAAGAACTGCTAAAATGTAGCGTAGATAT 3524 28 100.0 32 ............................ ATAATGACGGGCGTTTTCTTTGCGACCTGTGA 3464 28 100.0 32 ............................ ATTATGCGGCTAAACTGGGGCGATTCCGAAAT 3404 28 100.0 32 ............................ ATAGTGCGCCACGGATGCGGCTTTCACTACAT 3344 28 100.0 32 ............................ GATTGGTCGGAAGACATCACTGCGCAATATGC 3284 28 100.0 32 ............................ ATAAGATACTCGCAAAAAGTGTAAAAGCTGTA 3224 28 100.0 33 ............................ CGTTGCCTGCAAATCGATGAATAGTTTCGGCAA 3163 28 100.0 32 ............................ TTTGACTGGTACGATGGTGCGAAAACCTTAAT 3103 28 100.0 32 ............................ TTTACCATCGGCGTATGATCGCATTGTGATTA 3043 28 100.0 32 ............................ TGATGTCATTCTTACTGTTGATAATGGTATTG 2983 28 100.0 32 ............................ TTAGCCCGGTGAAACTGCGTGAAAAATGGGAT 2923 28 100.0 32 ............................ ATTAAACTATAATTATTCAACCGGATGGAGCA 2863 28 100.0 32 ............................ TAAAAAAAGACCGCACTTTGGCGGTCTGTTGT 2803 28 100.0 32 ............................ AAACGAGTTGAAGACGCAACAAAAAACAAACG 2743 28 100.0 33 ............................ ATTTCTTTCGTCCTGTAAAAGTTCGGTCGTTTT 2682 28 100.0 32 ............................ TTAATTTTTTAATAAAAAAGCCACTTATTCAG 2622 28 100.0 32 ............................ TGTGCCGCCTGTGAAGACGATCCGTTAACTTC 2562 28 100.0 32 ............................ ACAAACTCGATCGCGTTATCACGTAAGGTTTC 2502 28 100.0 32 ............................ TGATTCAAAGATAGCCGTCATATCGGTCAAAT 2442 28 100.0 32 ............................ TAAGTCTGTATTATCAACGCGGACTTTTAGTC 2382 28 100.0 32 ............................ ACACCACGTGACCTATGGTTTTCAAGCTATGA 2322 28 100.0 32 ............................ TAGAAAAACACTTTTGAAACGGACCGCACTTT 2262 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 97 28 100.0 32 CTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : TCGTAATGATGAAAACCCGGAAGTCACCGACCGTTTTGAACTCTTCATCGGCGGACGCGAAATCGGTAACGGCTTCTCAGAATTAAACGACGCTGAAGACCAAAACGACCGCTTCGACGCACAAGTCGCCGCCAAAGAAGCCGGTGATGATGAAGCCATGCTTAAAGACGAAGATTTCGTGGTCGCACTCGAACACGGCCTACCGCCAACAGCCGGCGAAGGCTTAGGCATCGACCGCCTGGCAATGCTCTACGCCAACGCGCCGTCTATCCGTGATGTGATTTTATTCCCGGCGATGCGACAGAAGTAGTCAGCACAGCTATCAAGATAAAAGGAAGCCATTTGGCTTCCTTTTTAATTCCCCTTATTTTACCCTTTATTTGCACAATAAAAAAATCCTTTAAAAAACAGTATACTAAAAACATAATCTATAAAAAGGATTTTCGCTTTCAAATACGCTAACAACTTGGTATATCAGCTATTTTCAGTTAGAATACCTA # Right flank : AGCTTTGGTCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAACCAGCAATTTCTTCACTGCCGAATAGGCAGCTTAGAAAACTTGGAAACCGCCCAAGGAGTAAGATTGAAACTTCACTGCCGAATAGGCAGCTTAGAAATCGAATTAAATTACGGGCTTCCGCCCATCGTTCTTCACTGCCGAATAGGCAGCTTAGAAAAGATCGGCTTACGAGTTCGTGACTGGCAATGACTTCACTGCCGAATAGGCAGCTTAGAAAACAGTAAAAAGTGGTTGCTACAAAAAGATTTCTTCACTGCCGAATAGGCAGCTTAGAAAATATTGACTGGATGAAAGCACGCTTTATCGAACTTCACTGCCGAATAGGCAGCTTAGAAACTGGAACCCAATAAAACCGGTTATGCCGGGATCTTCACTGCCGAATAGGCAGCTTAGAAAACAATGCGCCGATATAAATCAAGGTAAAAATTCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [10.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //