Array 1 891434-891581 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031123.2 Providencia huaxiensis strain WCHPr000369 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 891434 28 100.0 32 ............................ TCAGCTGACGAGTCGGGCAACTACCAGAGCAA 891494 28 100.0 32 ............................ TCAGCAGTAAAGACAATGCCTTTGGATGCTTT 891554 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCACACAGGCAGCTTAGAAA # Left flank : CCAATATTGAAGCTAAGCAAGGCTTACAATTACAAGAAATTGATAAATTGAATTTTTTAGCTGACACGCGCTCAATTCAAAACGCAGCCCGTAAAAGTGAGTTGTTAGAAACTAACTGGACTGGCACCACCACAGATTATTATAAAGAAAAAGCGATGTTTGAAGCTTCACAAAGTATTTTTAAAGACTTAAATAGCATGTCACTTTTCGGTAGCCGTTAATTATTTAATATTATTTTTACTCACCGCGCTGTGGAGTGATCCAAGCGCGGTTTTTTTGTTTGGTTTTTTTAGTCACTACTTCAAAGTTTGAGTTCACTATTTGTGTTTTTCATATTGCATAAATTTGCGTTTGTTTTACCCTAATTTGACCTTTTATTTTTACTCTTTAAAAATCCATTGACTAAACAATAAGTTGCAACCAGTACTGAAAATAAAGCTATTTTTCATTTTTTAAAGTTAGCACGTTGTTTTTATTTGTTTTAATCTACAAAAGTTATA # Right flank : AGTCAGATGTAGATACCATCTCTAGAAGCGAACTCAAAATTAATGAAGGTTAATTTTGGCTGATATCTTATTTGATTTTTTATACCCCCCAAACAGATTTGAATCAGCTTTTGCGTTGTAGTCCATAATGCTGCTCGAGTCTCAGATTTAAAAAATTCTATTGGTATTGCTAATTGTTCATTGTATTGACTGTATTTTGGCATAAAAAGCGCGGTAGTAATTGGTTGTCCAACTATTGGGGGGCACTTCGCTTTTAAATTTTCCTTAGGGTTTTCTTTTTGTAACAAAGCTAAACTAGATATCTAATTTCACTTGAACATCAATATGTATTTTGAAATAGATGATAATCCACCATAACGGTAGCTTTTTGCTGTTAGATGACTTTACTATTTGATAGTATGAATTCCCTAATGTTTCACAATGGTTAAGTAGTAGCCTATGATTTTTTAAGTACTGATAGAAAAGTGAAAGAGTTAGGCATGCAACTTGAAAGTCGTAGC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCACACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 903153-903839 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031123.2 Providencia huaxiensis strain WCHPr000369 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 903153 28 96.4 32 ...........C................ TTGCTAATCTGGTTTCATTTTAAAATCTGTAT 903213 28 100.0 32 ............................ TTTCGGCGTGGCAACCACAAATTCGTATCAAT 903273 28 100.0 32 ............................ ATTACTGATAATACCGCAGCAGCGCAAACCAA 903333 28 100.0 32 ............................ ACCCTGAAATATCACACTGGTCATCTTCAAAA 903393 28 96.4 30 ..........................T. TATATCAAGACAGAAAATTCCAGTTTGCAA 903451 28 100.0 32 ............................ TCTAATTGAGGTTTATACGTCTCGGGGCAGTT 903511 28 100.0 32 ............................ CAAGCGGTTACAGCGCTTGAACAGGCGCAGGC 903571 28 100.0 32 ............................ ATGTAAGATGGTTGCATTGCATAAATTGGTTG 903631 28 96.4 33 ...........C................ AAGAAGCATTCACTGGCGACTTTCACGTTGTTA 903692 28 92.9 32 A..........C................ TAGCCTTTAACATTGCATCTGCCATGCGGTAG 903752 28 100.0 32 ............................ ATCACTCATAATCGGTTTGCGTAGCCGTGGTT 903812 28 96.4 0 ...........C................ | ========== ====== ====== ====== ============================ ================================= ================== 12 28 98.2 32 GTTCACCGCCATACAGGCGGCTTAGAAA # Left flank : TATTAAATCGATTCAAACCGTACCTGAACAGCATGTCCAAGTAAGCTATATTCGAAAGCATGTAAAAGGTCAGAGTCGAATTGAAGCCGATATGCAGCAAAAAGCGCGATTATGGTCTGAAAAATCAGGACAACCATTAGAACAGTGCTTAAAGACGTTGTCTGCGAGTAAGCCAAAGGCGGCTAATCGCTTGCCATTTATTTGGGTTGAAAGCTTACATGCCAGAGATAAGCAAGCTGAAAGCCGGTCTTTTCCTTTGTTTATTAAAAGGATAGACGCTACACAAAAGCAAGTTGGGGTGTTTAGTTGCTATGGTCTTAGTCAAACAACTAATGACACAGTTTGTTTAGCAACGGTTCCACATTTTTGACCTTTGTTTTTTGCTCTTTTAAAATTGGTTAATAAATCAGTAAGTTATAATCATCAGTAAATAAAAGGGTATTTTTCGATAAATACCCTTAACTGATTGTTATTACTTGTTTTTTGTTTTAAAGTGCATT # Right flank : ATTGTGTTGCGATAAAGACAGGAAACTATATTGGAGCTACTAAACGATGAAAACACATAAAGAGCTACATGATGAATGGATGAAAGATCCAGAATACCAAGTTGCTTATGAAGAAGAAATTAGAACTGAAAAATTGCAGGCAATGCTTAAGGCGTGGCGAGAGTCAGCTGGGTTAACAAAAGTTCAAATCGCTGAAATTATAGGGGTTAATCCATCAACTATCACAAGGTTGGAGAGTAATGAGAATAATGCGAGTATTAAAAGCATTGTAAAGTATGCAGCTGCATGTGGTATTAAAAACCCTGTAATCGCCCTTTAAGATAAACTTTATTTACTTTTAATTAGTCATCCCATATTAACTTTTAATCTTTACGTTAAAAACAATTCATCTTAGATTTCTCTCCGTACCGTATTAATTAAGTAGATAGATAACTGTCAATTGACAGCTTAGAAACGAAACAAGTAATGGGTATGATTACCGCCACGCAGGCGGCTTTTTA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCATACAGGCGGCTTAGAAA # Alternate repeat : GTTCACCGCCACACAGGCGGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //