Array 1 143244-143701 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACYOE010000015.1 Bacillus thuringiensis strain s1783 strain_1783_scaffold16, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                                                                                                                    	Insertion/Deletion
==========	======	======	======	================================	===================================================================================================================================	==================
    143244	    32	 100.0	    34	................................	ATTAAAAAAAATCAAAGCAGAGGATAAGCTAACG                                                                                                 	
    143310	    32	 100.0	    35	................................	TATATGGGCTGATAACATTTCATTAATTTGCTGCA                                                                                                	
    143377	    32	 100.0	    33	................................	ATTACCATTTATATCTCTTATTATAAATCTTGC                                                                                                  	
    143442	    32	 100.0	    34	................................	TGGTACATGCTTATAGGGTGTCTAGTTAGCTTTC                                                                                                 	
    143508	    30	  90.6	   131	..........--............G.......	TGCGAATATGTCAAGAGTACGTTTGTTAGACAATTTTCGCTCCTACCTGAGAAAGTAGGGTTTGGATTTTGCTGCTTTTAGTTTAATCAAATCGTTCTTTTTAAAGGAGCGCGTGCTTAAGTATTTGTTTC	T,GG [143523,143527]
    143672	    30	  81.2	     0	...-....-G...T.A.G..............	|                                                                                                                                  	
==========	======	======	======	================================	===================================================================================================================================	==================
         6	    32	  95.3	    54	GTCGCTCTCCTTAGGGGAGCGTGGATTGAAAT	                                                                                                                                   	       

# Left flank :   GTAAATTACGGGCTTTACGTTTGCTATGGTTCAATTAATTCACAATTGGCACAAGACACGAAATTCTCCGATAAAGATGCAGCTCTACTAAAGGAAATCTTGAGTTCAATTTTTGAAAATGATTTGTCTGCAGCTCGCCCTTCAGGGTCAATGGAAGTTCATAATGTATATTGGTGGGAACATAATTCACCTTTAGGTCAGTATTCATCAGCAAAGGTACATCGATCCTTGGAAATCAAACAAACGGTGGAATCACCTACTTCTTATGATGATTTTGAAATTAAGGTAAATGAGCTTGATGGATTATCGGTGGAAGTATTACCAGGATACTAATAAGATGGGGTGCGAATCATTAGTAACCATAAATTCCTACAATCATTCGCACCTAAAATAACGATTCTGAAAGTTTTTATAGGTAAGTAACCCTTAGTAGTACTTACTTAATATAACTGTTCTAATAACATTCTAATATATAACTTCAATTTTAATATAAATTTGAA
# Right flank :  TTGCACGTTTTATAGTAGTAATTGATGGTCTATTTGAATCGCTCTCCAGGTGGAGGGCGTGGGTTGAAATTCTGATTACTAGGTGATTTGAGGAAAGGTATTGTCGCTCTCTGCTCGTAGAGTGCGGATTGAAACATAGATGAAAACGATTTGGTTTTAATCGCTCTCTATTCGAGGGAAAGGTTTGAAATTTCTCAAGAAGCTCGCAAGTTATTAAGCCTGCTACGTCGCTCTCCTCAGGGGAGCGTGGGTTGAAATTCAGATTACTAGGAGATTTAAGAATAAAGTATTGTCGCTCTGTGCTCAGAGGGTGTGGATTGAAACATCGATGGGAAACGTGCTGGCCTTTTTAGTTTAAGTCGCTCTCTATTTGAGGGCGCGGGTTGAAATGCTCGGAACGGAATTAAGTGTTTATAATGTCGCTCTTCATTAGGGGAGCGTGGATTGAAATGACGAAGATTTTAAACTAGATATTTATTCGTCTTTTTCTGGTGAAATGT

# Questionable array : NO	 Score: 6.94
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:-2.07, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCTCCTTAGGGGAGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-4.50,-4.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [86.7-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.68,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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