Array 1 7517899-7518819 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFQ01000004.1 Nocardia sp. BMG51109 D892DRAFT_scf7180000000033_quiver.4_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 7517899 36 100.0 38 .................................... CGGGGGTCGATGGGTGTTTCGCGACCGTGCGGGCGCGC 7517973 36 100.0 37 .................................... GGCGAGAGCTTCGGGTGTCAGCACGGGCAGCTCTCCG 7518046 36 100.0 35 .................................... CGGCTCTCGCTGTAGTTGGCGTGCTTGCGGACTTC 7518117 36 100.0 40 .................................... GGGTGGATCTCCTTGCGGTAGTTGGCGGTTCAGTCTTCGG 7518193 36 100.0 36 .................................... CCGCAGCCAGCCCAAATAGCGGGTGGCAGTAGCGAT 7518265 36 100.0 37 .................................... GAGATCGGCGGGCCGGAGTTCCGGCTGTGCGCCGCGC 7518338 36 100.0 39 .................................... CTGTGCCAGTCGAGATCTTCGGGCCAATGGATCGGTTCG 7518413 36 100.0 37 .................................... GACGGATTGAGCCGTCACCGATCCGGAGGAGCCGGAC 7518486 36 100.0 35 .................................... ATGCCACACGTCTGCGTGGTGCAGTTGTAGTGAAG 7518557 36 100.0 36 .................................... GTCCACGGCGTCGTTACATGCTGGCTATTGGTGATC 7518629 36 100.0 40 .................................... GTGATGGACACGCAGGCGGCGCGGGATGCTGCGGCCGCCT 7518705 36 97.2 42 ...................................C CAGTCGCGTGGTGTGTCGTCGGCGAGCAGGCGCAGGATGGGC 7518783 36 80.6 0 ..........GT.C...........A......A.AC | C [7518796] ========== ====== ====== ====== ==================================== ========================================== ================== 13 36 98.3 38 GTGCTTCCGGCCGTTCCGGCCGGACTCCATTGCGGG # Left flank : CCGCGACCAGTGGCACAGCTTCGTCCAACGAGAAATCGCACGGGAACTTGCCCAAGACCAGCCACCTACGAGTGTCGAATTCCTCGGCCTACCGTGGACCAGCTTCGTACGCCACCGCCCGAGCGCCCGGCTACGGGGCAACCACGCCCAAGGCCAAGCCCACCTCCCCGCCGAATTCCTGCGCCTGCACTTCGACGAACCCGCAAGGGGCCCAATAGCCCTCGGCCGCCTCAACCACTTCGGCCTCGGCCTGTTCGTCCCCGACGACTGACCCGACCGACACACTCCCACTCCCCAAGACCCAGCCCTTTGACAACTCCACAACGAACCCTTGCGAGCGGTCCAGTGACACCACGACACGCCTTCACCGCTCGCACGCAGCTCACAGCACCTTTCCGAGGAAACCACCACCGAATTCCCGGGCGTGTCGGACACCAACCAGACCACCGCTCGCAACACCCCACATCGATGCAGGTCAGACCCGCCAAATTTCGGGAGCG # Right flank : CCTGAACGGGATCGACTGCTGCGGCCGCCGTACATCGGTGCGGGCGCCGCCGACCCGCTCTGCACCCAAGTTTTGAAATATGCCGCGAATCTGAGTCGTTCGGGCCACCATCGAGTCATGACCGCCGAGGATTTGCTGCCTGCACGGATGCTGAACGAGTACGTGTACTGCCCTCGGCTGTTCCACCTGGAATGGGTTCAAGGCCGATTCGCCGATAACGACGACACTCGGCTCGGACGGCAGATTCATCAGCGAGTCGATCAGGAGGGTGGCGGGGTCCCGCTTCCGGAAGACGGCGAGATTCGGAATGCGCGGTCGGTGACACTGAGTTCCGAGCAACTCGGAGTAATCGCCAAGATCGACGTCATCGAGGGCGACGGCGGTTCGGTAGTGCCCATCGATTACAAGAAAGGCTCACCACAACCTGATGGAACACCCTGGCCCAGCGACGAGATACAGGCATGTCTACAAGCGATAGTACTGCGCGACAATGGCTTCCA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTTCCGGCCGTTCCGGCCGGACTCCATTGCGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.20,-15.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 7521118-7521517 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFQ01000004.1 Nocardia sp. BMG51109 D892DRAFT_scf7180000000033_quiver.4_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 7521118 37 94.6 35 ...................................CG GCGCAGGGTGTCGCCGTCCACTTTCGCCACCGGCG 7521190 37 100.0 35 ..................................... CCCGCCTGTCTGCCCATGCATCGGGCGATGCCGCC 7521262 37 100.0 35 ..................................... GTGCAGTTGATGTGCATCTGCATGACGGCCTGCGC 7521334 37 100.0 38 ..................................... CGTATTGAGCGCTGGTGCACGCTGACGGATGCCGCGTG 7521409 37 100.0 35 ..................................... CTGCGCTGGTACGCGTTGTCGACCGGGCTGGAGAT 7521481 37 89.2 0 ...............T..........C.....T..A. | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 97.3 36 CGTGCTTCCGGCCGTCCCGGCCGGACTCCATTGCGGC # Left flank : TCGCCTACGACATCGCCGACCCGCGGCGCCTACGGCATGTCTGCACCCTCATGGAGGACCACGGACGCCGACTGCAGTACTCCGTTTTCGTCTGCGACCTCTCCCCCGCCGAACTCGCCGAACTCGAAGCGGCCGTCACCCGCACCATCGACCTCACCGCCGACAGCATCGTCCGCATCGACCTCGGCGACACCACAAGCCCGGCCACGATCACCACTATCGGATCCCGCCGCCGGTTCCCACCCACCGGACCACAAATCGTATGAACAACCCGGACCGGTACATTGCCAGTACCGCCACGCTCATTCACAACTCCACAACGGAACCGCCCTGCGAGCGGTCCAGTGACACCACGACACGCCTTCACCACTCGCACGCAGCTCACAGCACCTTTCCGCGAAAAACAACACCGAATTCCCGGGCGTGTCGAACACAACTCAGACCACCGCTCGCAACACCCCGCATCAACGCAGGTCAGACCCAACGAATTTCGGGAGCCG # Right flank : CCGGCAGCAGGAAGCGGCGCTTCTGATCACGGCACTCCGCCTGCCCCTGGGGGACTCCGGTGCAGAATCCCGTCACCGGCTATCGGGATCCGTCACGCGCTATCGCAATTGAAGTCCTGTCCAGCCGGCGCACCTACCAAACGGCGTCCAACCAACACCTTGTCCGCGTCGCTGCGGTCGACGACCAGGGTGTATTCCTCTCCACGGCAAGCATGAGAATCCAGACCCAGCACCCGGATCCGCGCACCACTATCGGCATCGACCAGAACCGAACCAGCACCTACGCTGCCAGCCACCAAGTGGCCGGTGACCAACAACGCATCGCGCCCCGGCAGATTCCAGACCCAGGTCACCATGAAATCGACATTGCCCGTCATTCCCCTCCTCGAAACGCACACCACGACAGAACAGGTCACCGTAGCCAGGTTCTCCAGCGGGCGAAGTGAGCTGCGCGGGAAATCGAACTCCGCGTATCCCGTTCTCAGTGCCGCTTGTCGATC # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTGCTTCCGGCCGTCCCGGCCGGACTCCATTGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.30,-15.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 3 7529990-7530473 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFQ01000004.1 Nocardia sp. BMG51109 D892DRAFT_scf7180000000033_quiver.4_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================ ================== 7529990 36 100.0 36 .................................... CTGGAGTTCGCGCGGGACTCGCAGCCCAGCAAGGAC 7530062 36 100.0 48 .................................... GTGCGGGTCGGGATGTCGGCGATCATCTTCGCCGAGTACCAGTCGAGC 7530146 36 100.0 37 .................................... GTGCGGGTCGGGGGTTCCGATGGCCGTGCGTGAGCGC 7530219 36 100.0 35 .................................... GACCAGATGGTCCGGGCGCTCACGGGCTGCCCGAT 7530290 36 100.0 38 .................................... AAGAACAGAGTCGAGATCGAGACCGCTCGCGCGTACGT 7530364 36 100.0 38 .................................... TTCGTCTCGTCGATGTTCTTCGCGGTGTGGTCGATGAC 7530438 36 94.4 0 ..................................CG | ========== ====== ====== ====== ==================================== ================================================ ================== 7 36 99.2 39 GTGCTTCCGGCCGTTCCGGCCGGACTCCATTGCGGC # Left flank : CCGGCAATCCACCGCACCCCACCCACCGTGTACGTGCAGACCCGATCGTCCTCGGTCACCGGCACCAGCAACACCGCCTCCCGCAACGCCGCCACCAGCAACCCAGGCTGCCCGAACCCCGCATAAAACGCCTGAACCTCCGACCGCAAGGCCGAACCGTCATCGTCGGACATGCCCGGTAGCCCCCTCCCTGGTCAGAAGCCGTGCACACCGCACTCGCAGCATACTGAATCGATACCGACCGAGGGGCCGTGCCCATTGCTCATCTGTCGGCCGACTTCACCCGAACCGGTACATTGCCAGTAGCCCTACGCTCATTCACAACTCCACAACGAACTCCTGCGAGCGGTCCAGTGACACGCCTGCACCGCTCGCACGCAGGTCACGGTGCCTTTCCGCGAAAACATCCACCGAACTCCCGGGCGTGTCGGACACCAATTGGGCCACCGCTCGCAACACCCTGCATCTACGCAGGTCAGACCCGACGAATTTCGGGAGCC # Right flank : GAATGCCGAAGCGGCACATGCGGCAGACGCTCGCCCCGGCAGCAATAGAGCAGCCCTCCTCCGGGTGCCCGGAGGAGGGCTGCTACCAATCTGCTATTACAGCGACGAGTCGAATTCTCCGCTCGCCACGCCTGCGCTGAAAGCGTCCCACTCGCCGGGTGTGAAGACCAGCGCCGGGCCTGTCAGGTTCTTCGAGTCACGGAGGCCGACCATGCCCTCGTCGAGAAAAGCGACCTCGACACAGTCTTGGCTACCTCCGCTATGGCTGCTCTTGAACCACTGGGCCGTGGACAGATCAACGCTCACCTTGCGAACTCCCTTGCTTGCTCACGCAGCAGACGCCTGCTGTCTTGCACGCCCAACGCTACCTCCCGCAGGCCGACGTGCGCGCTCCGATACCGCTCCACGAGTTCGGGGTCATCGAAATACATGGCACCCGTGTACCCTTCGGCGTACACCACAGGCGGTTCGATCGGCTCTCCGTCTGCGGAACGGGGGAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTTCCGGCCGTTCCGGCCGGACTCCATTGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.20,-15.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //