Array 1 674911-676830 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068408.1 Lacticaseibacillus paracasei subsp. tolerans strain S-NA5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 674911 28 100.0 33 ............................ TGAACGCGGTTCTAATGTCTGACAACAACGGCG 674972 28 100.0 33 ............................ CACGTCCCGCTTCGTCTCATTGTTCATCGTCAG 675033 28 100.0 33 ............................ CGCCTCGGCTTGATTGAGCACCTGAGCATACCA 675094 28 100.0 33 ............................ CCCAACTAACAGAGACTTTTTCATAGTGAATTC 675155 28 100.0 33 ............................ CGAAGTTACGCCGCCACAAACGCCGAAGCTTGT 675216 28 100.0 33 ............................ TCAGTCCTTCGTCCAGAATGTCCTGAATCACGC 675277 28 100.0 33 ............................ CTGTGTTTCCCATAGCACCCAACCCCCAATCCC 675338 28 100.0 33 ............................ CGTCATGCAAACAACAAGGGGGACAATATGAAG 675399 28 100.0 33 ............................ CAACACTTTTGCTCCGAAGGTTGATTCGATCGG 675460 28 100.0 33 ............................ TGGTGTTATCAATAAATTGATTGCCAACATAGT 675521 28 100.0 33 ............................ TGACAAGGCCAATACGGCTTAACAAAACATCAA 675582 28 100.0 33 ............................ CTATACTTTTACTGGTGCAGGCAAAACTTATCC 675643 28 100.0 33 ............................ TGGGCGAACCGTTGCACAGGACACGCCACAGCA 675704 28 100.0 33 ............................ TGGATTCGTCAAACTCTTAGTTTTGAGAATGAC 675765 28 100.0 33 ............................ CCATAGAAAGAGGCACAACGACACTCCCACCAG 675826 28 100.0 33 ............................ CACGCTGAAACAGATTTCGGTTGATGTTGCTCG 675887 28 100.0 33 ............................ CAGAATTAAAATTAATGGCGCCAATCTTATCAA 675948 28 100.0 33 ............................ CAACGCTAGACGACGCAACTCAAGAACAAGTCG 676009 28 100.0 33 ............................ CAAGCTAACCTTTCGCCTAGATCGTCTTGATTT 676070 28 100.0 34 ............................ CAAAAGTCTGAACGCGTTTATCATCTCGATTTCA 676132 28 100.0 33 ............................ CCATAGCGGCGTCAACATTAGTACGCTCAATCT 676193 28 100.0 33 ............................ GGGGATGACTGTATGAACGAACGCAATGAAAAA 676254 28 100.0 33 ............................ TTTCATGGTGCCCTCCTTATTGCTGTGGAGCAA 676315 28 100.0 33 ............................ CTAATGTTACTGATATTTTTATCAAGCCATTTG 676376 28 100.0 33 ............................ CACTTTGTATTTTCCAGCCATTTCCCACTTCAC 676437 28 100.0 33 ............................ CACTTTGTATTTTCCAGCCATTTCCCACTTCAC 676498 28 100.0 33 ............................ CGCTGTCTTGCCTCACGCACAGTTTCAGCAGCC 676559 28 100.0 33 ............................ TGGAGATCAAGATGAGTATTATGCATACGTTGG 676620 28 100.0 33 ............................ CGACTGATACTTCTCTGAACCGGTTCATTTGTG 676681 28 100.0 33 ............................ TGCCATTCCACAGTCCGCTGAAGAATGAAGCGA 676742 28 100.0 33 ............................ CACACGATGACGAGCTTGGCAGTCACTCGGTTA 676803 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 32 28 100.0 33 GTTTTCCCCGCACATGCGGGGGTGATCC # Left flank : GAACGAGATGCAATTATTGCCATTGGGGCGGTAAAAGGACCGTCAGTTAACGAAACCGAAAAATTCACTACCTTGGTGAATCCACGAAGGCCGCTTCCATCAACGGTTGCCAAGTTGACGGGATTGTCGGCGGAGGAGTTGGTTGCCAATGGGATCAGTCTGAGCGAGGCAGTGCAGGCCTTACGGGATTTTACCGGCTCGCTCCCTTTAGTCGGATATAATCTGCGTTTCGACATGGGATTTCTTTCGGCAGCGGGTCGTGAAACTGGGTTAACGTCTTTTGGGAATCATACTTTTGATTTACTACCGCTTGTTAAGAAATCCAGTCGCTTTCTGGATAATTACAAGCTTAGTACAGTGCTGGCACATTATCAGATCGATAACGAGCAACCGCATCACGCGTTGTCTGATGCGACGGCAACAATGGCACTGGCGGACAAACTCATAAAAAAAGGAATCTTAACGATTGGCAAACGTTGATGGGATAGGGATTTTTTAGT # Right flank : CCCTCTGCCCAGTCACCAATCGTGTATCCAAAAAAGGGTTCTGGTGCAAATTTTCCTCGCTGACTTGATTTTAGTATACTGGGTGCCAAGAAACGAGGGATTGCGCGCATGAATCACTTTAAGGGACGCCACTTTCAAAAGGACATCATCTTAGTAGCCGTTGGCTACTATTTCAGATTCAGTCTCAGCTATCGTGACATCGTTGAATTGCTTCGGGATCGGGGTATCACTGTTCATCACACCACGGTCATGCGTTGGGTTCATCACTATGGCCCCATCTTTAAGGCTCTATGGCGTCGGCATCAAACAGCTCACGCTAAAAGTTGGCGAATCGATGAGACCTATATTCGAGTTAAAGGCCGTTGGGCCTATTTGTATCGCGCTATTGACAGTAACGGTTTGACCATGGATTTTGAGCTACGAAAACACCGCGATTATACCGCATCCTATCACTTTTTGAAGCGTCTCTTGACGACCAATGGTCGGCCTGATCGATTAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACGTGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //