Array 1 2452960-2451071 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053619.1 Lacticaseibacillus rhamnosus strain LV108 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 2452959 36 100.0 31 .................................... TTTAGAATACGATTATAAGACAGTAGTTTGG 2452892 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 2452826 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 2452760 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 2452694 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 2452628 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 2452562 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 2452496 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 2452430 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 2452364 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 2452298 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 2452232 36 100.0 30 .................................... CTCGTGACTTGTCGTGATATGCATACGCGC 2452166 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 2452100 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 2452032 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 2451966 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 2451900 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 2451834 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 2451768 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 2451702 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 2451636 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 2451570 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 2451504 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 2451438 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 2451372 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 2451306 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 2451240 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 2451174 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 2451108 36 86.1 0 .......................AA.C....G...G | T,C [2451074,2451080] ========== ====== ====== ====== ==================================== ================================ ================== 29 36 99.5 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //