Array 1 2675463-2676344 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006664.1 Edwardsiella anguillarum ET080813 strain 80813 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2675463 28 100.0 33 ............................ CTCGGCATGATTACCGATAGCGATAAAGCTGCT 2675524 28 100.0 34 ............................ TTCCGGGCAGGACGACCACTTCACGGCTGATGTA 2675586 28 100.0 33 ............................ TGCTTATGGAGCCGGAAACATGCGCGTACTAAA 2675647 28 100.0 33 ............................ TGCAACTACTCAACATCGTAGCGCCGAAAGGAA 2675708 28 100.0 33 ............................ TCAGCAGCACACCAATGATCCACTCAATGTGAC 2675769 28 100.0 33 ............................ TCTGGCCCACGAAAAAACACCCTGGCGCCGGGG 2675830 28 100.0 33 ............................ CGTTTGGTGATGTTAGTTGCGCTGATCGTCTCC 2675891 28 100.0 33 ............................ TCGCCGACAGCGCACTCAGCGCCGACGCGGCCT 2675952 28 100.0 33 ............................ TCGTTGAGCCAGTCTTTTTCCATGTATGTGCCG 2676013 28 100.0 33 ............................ CGACGCTTTAAGCTCTACACCGGTCGCCTGAGC 2676074 28 100.0 33 ............................ TGATTGATGGCTGTGTAGCGCGGTTACGTAAAT 2676135 28 100.0 33 ............................ CAATCGGCAACGATCCAAAATGGTTGTCATGAG 2676196 28 100.0 33 ............................ CGTACAAGGCGCTGTTAGCCGGAACCAAATTGC 2676257 28 100.0 33 ............................ TCTCACACCTATCTGTCCGGCAACATCGAGTGC 2676318 27 92.9 0 ................-A.......... | ========== ====== ====== ====== ============================ ================================== ================== 15 28 99.5 33 GTCTTCCCCACGTCCGTGGGGGTGTTTC # Left flank : GAACCTCTGTATCGATCTTGCCTTCTCCCTGACGCGTGAGATGGCGGGTCGTTATGAGAAGGCTCTGGTTTCATCTCGTTTTCGAGAGCGGGTGATAGAACTGAATTTGCTCGCGAGTGTAGCCAGAGATATACCACAGCTACTTGGAGGGGCAAATATTGATGCTGATAGTGCTAGCTAACGATTTACCTCCAGCAGTTCGAGGACGAATGAAACTTTGGTTTATTGAACCGCGGCCAAATACCTTCGTTTCCGGTATCAAGGATTCGGTTGCTGACACAGTGATCGAATACCTTTATCAACACTGCTCACCGGCAGCGGGTGTGGTGATATTTAAAAGCATTGCTAGAACACCGGGATATCAGATCCATACCATAGGATCACCGACTAAGACGCTCTGTGAGATCAATGGCCTGCAGTTGGTGATAGAAAAGCGACTCGAGCAGTAAGTTAACCACAATATGTAGTTGGTTTAGTATGCTCTTTAACAATATAATGGG # Right flank : CCAAAAGTCAGCCAGTGAACCGTCTCGGTTTTGTGGGAGAGCGTTAAGTCCGGGAGTTCAGGCTGCCATAGCCTCGTTCCCGATGGGAGCGTAATACACTTTTTCTGCCTCAGCGGGTGGGATGTGACTCAGCCGCTCAAGCAACCGACGATTGTTGTACCAGTCCACCCACGCCAGTGTGGCCAGCGCCACTTCCTGCCAGTTTCTCCAGCTCTGTCGGTGTTTTGTACAGACCGTTGATACTTTCGGCCATGGCATTATCATAAGAGTCACCCGTACTGCCCGTTGAAGCTAGAAGCTCCGCCTCCTGTAGCCGCTGTGTGTACGCTAGCGATACGTACTATGAGCCTTTGTCGCTGTGATGAAGGGGGGCTGATGGCCGACGGGCCCACAGCGCCAGCTCCAGCGCGTCCAGTACGAACGCTGTCTCTTGGTCAGTGAAGCCTGGATCGCCAGTGGGGGTTCCGCCGGTGTCAGAAGCATCGCCACGATGGTCACTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3650545-3649660 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006664.1 Edwardsiella anguillarum ET080813 strain 80813 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3650544 28 100.0 34 ............................ TGGACTATGAAGCGGTAGAACGCTGGGTCTGTGA 3650482 28 100.0 34 ............................ CCCCGTAAGTCCATTAATGATCACAGAGCACCTA 3650420 28 100.0 33 ............................ CGTTTCAAAGTCGAGGGTTTCCACCGTATCGGG 3650359 28 100.0 33 ............................ CCCTGCATCGGTACATGACAAAGACTGAAGCGG 3650298 28 100.0 33 ............................ TGCCTTCAATGGCCGCCGCATTCTCTTGACCAG 3650237 28 100.0 33 ............................ TTCGGCCTTAGCCCTGGCAGCGGGCAACGTAGA 3650176 28 100.0 33 ............................ TGTCTTATCGGTGGCACCGCCAGATGCTTCCCG 3650115 28 100.0 33 ............................ CGATTGTCCCTGATGCCGCCAACTCTTTCCCAT 3650054 28 100.0 33 ............................ TGGCTATGAAAACGTGTTCCCGGTGTATGGCTC 3649993 28 100.0 33 ............................ TGCCGATGTATTCGACGTTGTATTTTTCGGTAA 3649932 28 100.0 33 ............................ TGACTGCGTAGATAGAGCACTGTGCAGCATCGA 3649871 28 100.0 34 ............................ CTACCAGCCAGCCCGGACAGGTCCAGCTTGAGGA 3649809 28 100.0 33 ............................ CTTTATTCTGGGCCGTAGCGCTGCTGGAACGCT 3649748 28 100.0 33 ............................ TAGCCCGGAAGGTTGGGAGAGTACGCTATGAAA 3649687 28 92.9 0 ..C........................A | ========== ====== ====== ====== ============================ ================================== ================== 15 28 99.5 33 GTTTTCCCCACGCCTGTGGGGGTGTTTC # Left flank : TTGTCGTGGCGCTTGATGAAGTACTCGGCTACAGCCTGAGAGGTGGTAACAGCTTTGCCATCGTGAATGGTTACACTGGGGGTGTGTACAGAAAGCCGATGAGTCATTTTTCTGTGTCCTACGTATATGTTCAAATTTACCCTGTGTTCAGCAGGGCGGTCGGGTACTTGAACACCGTACGTAGTCGGCCAGCAGTTTTTCCCTTACGGGTGTTGTATGGTCTGCTCGCTACCCGGCCATATCTGAAAGTATGGACACAAAAAAAACCGCATTGCTGTCGGGTGCGGAGGCCGCTACGTAAGGTGTGTTCAGCACCTGAGCGGACTATACTCCCGGCATCGCGGGTAAAACTAATTTCGATTTATGATACTTTACTTACAAATCATAGGAATTCAATGAATCATTCTAGCCTGACCATACAGAGCCCCATCTGGCTATTCGACCAGTAAACCAACCACAATCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : ATAGGAAACTGACCGAGTCACATATCAAGGCCAATAAAACCAGGCTGCTGGCTATGTGGCAATCAGCGGCGCGATTTTGGCTATCGTGCGGGAAAATAACGCACAGCTCGGTTAAGGGCTTACTGTGCGCCGTCAAGCGCCGCCCTTCAGAGCGGGGGGATACTCACTCTCATCACTAGGATCACCACTGATGAAGGTACTGGCCTCCTGAAACGACCGGAACACAGGTCATTTAGTGATATCCATCTAACTTACTGAAATACAACTAATCGATATCAAATAAAGATCGAGGGAATCCATTATTATTAGGGAGCCCCATAGCGGTTAAATTACACCCAGGCAAACGAGGTTTATCATTATCAATAAGATCGGCAATATTTCTAATCCATTTTGAGCCAGGGCCGATTTTTTTCACCAAAAACCATAGCACAGCTATCATCCCATACATTCTTTCGTAGGCATCATCATTCATACTCAATCGCTCAAAGTATGGGTAATTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGCCTGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //