Array 1 16329-16583 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWS01000145.1 Leptospira interrogans serovar Copenhageni str. 2002009669 ctg7180000004572, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 16329 36 100.0 37 .................................... AAAGGATCCTTTGATCAAAAGAATTCGTCCTTGATTT 16402 36 100.0 39 .................................... GGACATAGGACCAAACTTCCCATAATGTATCGTTATGGG 16477 36 100.0 34 .................................... AAGGGGAAAACATTCGTCACCCCGTGAAAAACTT 16547 36 88.9 0 .....................A........T..A.T | G [16574] ========== ====== ====== ====== ==================================== ======================================= ================== 4 36 97.2 37 CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC # Left flank : AAATTGGCAAAAGTCACCGAAGAAGAAGACAATATATTTTATCTGACTCTTTGCACCAAGTGTGCTTCGGGCGCCCATACCCAAGAAAAAAAATCCGCGTGGCCAGAAGCTCCAAAAACATTAAAAATTCTATAATTCAAGTATCTCTTCAGGGCATAGACATAATTCTACTTAAAAAGCAAAACTAAATCTTTGAATCTATATTTAATTCCAAGACATATCCAATCTTTACTCGGATTCAGAAATAGACCCTATCTAATGATTGGCCAACGCTCGTTTTTCTTTCTTGTGAAAATTCCAGCTAAATTTATAATCAGTGACGAGCTTAAACATACTTGAATCTTAATATTTGAAACAAAATGATCCTTGGAAACAAAATATGCACTTCTGAAAAAACCGAACATGAAAAATAACGATAAAAAACGATATACTTGTTCTCCTCCTTTGAAAACACTCATATCCACAATTTATGCTTATAAAAGCCATTTAAATAAAATGCT # Right flank : TGAAGAGAAGATTTGTTTTGGCCCAAATTGTTTCGCACCAAACGTGCAAACAGATAAAATGTAGGAACTACTACTTTTTCGAAAAACAGTAGTTTGTTCAAAGAAATGTGGGAACTCCCACTTTAAAAAAAGTGAATTCTGGAGATCTCCTCGGGTAAGAATCGAAAATACCTAATTACAGTAGTAAACATAAATTTGTACTGACAATCATATTCCTCAGCACTTTGCCACTGTAATTGAAAGAACTGGTTACACAAATTCGATCTACCTCTGATGCCGTTTAGGCGATCCTTTCAGAAATTTCCAAATACTATAGAGAAGGTATATCATATTATAAACATGGCATGTTTTTTAGGGTATTTAAAATTATATTTTATTTTAATTTTAGAATATTCTAAAAATATTTTGTCTTTAAAAAATAAAATGGAATCCGAAAAATGAATTTCTCCGAGTATATTGTATGTCCATTCCGAACGTCATTGAGTTAAACTTTCCGGTCC # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 959-749 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOWS01000089.1 Leptospira interrogans serovar Copenhageni str. 2002009669 ctg7180000004516, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 958 26 100.0 36 .......................... AAACTCAATGTATCTTCTATGGTTGCTCTGTAGGTC 896 26 100.0 34 .......................... ATGGGTCGGTGTTTAGGTTTTGGGACAGCTCTAA 836 26 92.3 36 .C...G.................... GAACTCAATGTATCTTCTATGGTTGCTCTGCAGGTC 774 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ==================================== ================== 4 26 98.1 36 GGTGGAAACTCAGCAAACACCTCCCT # Left flank : CCAAGAACCGGGATTGTTTACTAGTATCATTCCGGCTACGGTCATTCCTCGGAATAAGTCCAAGGATAAAATTCGATTTTGATTTAATTTATTTTCCAAATGATAACCTTTGAATTTTTTATTTTCCGAATTATGAAGTTATGTGGATCGAAACATTAATCCAGTATTTTTATTTCTTAGAGTTGTTCAAGCAGCTTCTCGTGTGACCATACAATCAAGTTGTATGCCAACTTTTTAAGAAATTTTGTGAGTAAATTGCTTATTTTGATATCGAATCTAAACTAAGAGCTTGTCCTAAAACCTCAAAAAATTTTACACAATCATTCTTTAGTAATTTTTAATCAAATGTAATAGTTCCTTCAAATTAGGTTGTATTTCACAATTTGTGAACTTTTAAGCGATTCTAATGTCGTTAAATTTTCATAGTAGCTCTCACATTTTTGTGAAACTCAATTTCACTCCCTGAACTCAATGTATCTTCTATGGTCGCTCTGCAGGTC # Right flank : ATGGGTCGGTGTTTAGGTTTTGGGACAGCTCTAAACTGGGAACTCAATTTTTCTTTTTGATTGCATTTGGGTTTGTAGATATTCTATTTTGTTTTTCTTATGCCAATTTTAGCTTATCGTAAGTCTATATAGTAATTTTCTCATTGCACTCAGTTGTGCTGATCGTTGATTGTTTCTTAATTTAACATGAGTTTGGTGTAAGAGAATCTTACTAAATCTGGCAGCGTGGATCGGGCTTTTAGCTCTGGTTAATAAATTAAATGCGGGAAACGTTATGCAATGTACTGTTTTTAATTTCAATTTATTAGAGTTGTTGAATAATTAATTCTCCATCTTGTTTTTGTTTCATGAAATGGTCGATTGAAGCAGTTTTGTTAGTCGCCGCTGCTGCTATGGAATTTTTCGGCAACTCTATTGTAGAACGCGATCCGTCGAACGGCCATGGAGAGTCATAACCAACCCCACAAGTATTTGATCTCAATATAAATCTGTCGGAATTA # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGGAAACTCAGCAAACACCTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //