Array 1 20525-19543 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJLE01000011.1 Campylobacter sp. P157 ERR473914.12448_4_62.11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 20524 37 89.2 35 A...T..G.T........................... TGATTGTATTGCTCTAGCTTTGATTTTCTTTGGCT 20452 37 100.0 35 ..................................... TACTCACTATAATATTCAAATGCAAGAAGTCGTGA 20380 37 100.0 35 ..................................... TTTGATTATTTACCTTTGTTTAAAGCGTATGAGAA 20308 37 100.0 36 ..................................... TTAATCCGCAATCTAAAGATGATTTTATTTATCAAA 20235 37 100.0 34 ..................................... TGGAAAATGAACTTATTAAAATGATTGAGAGTGG 20164 37 100.0 40 ..................................... CAAATCAGCCACCAAGGCAGATAGGCTATTTATATATAAT 20087 37 100.0 35 ..................................... GATATTTCTATAAATAAAGCTTATGTTTTTGATGT 20015 37 100.0 35 ..................................... ATCCTAAGTTTGATTAGTCTTGCCTTGATTTTGGC 19943 37 100.0 35 ..................................... CCAAAACGCCTTAGTTTGTGGTTTAATGTCTGCTA 19871 37 100.0 36 ..................................... CTACCAAAGATGGTAAATTTGATAGCATTTTGGAGT 19798 37 100.0 36 ..................................... AAGTAACATTTTAAAATTACTTAAAGAAAAATATTA 19725 37 100.0 37 ..................................... ACAATTGGAACGAAGCAGACACTCCAGCAATTTTAAA 19651 37 100.0 35 ..................................... TTAATCTTTTATAATGAAAATCGCCCAAGTTATAC 19579 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 14 37 99.2 36 GTTTCAAACCGAGTTGATTTGTGGTATAATTTGCAAC # Left flank : TGAGATGTGTAGCGGATTAGACTTAATAGAGTGGATGATACGAATCTCACAAGGCGAGAGATTGCCAGAGCAAAAAGATATCAAATTAAGTGGCCACTCAATAGAGTGTAGAATCACAGCCGAAGACCCAAAAAGCTTCACCCCAAATCCAGGTAAAATCACAAAATATGTCGCCCCAGGCGGTAGAAATGTCAGAATGGATAGCCATGTCTATGAAGGTTATAGCGTTCCGCCGTATTATGATAGTATGATAGGCAAATTAATCGTCCATGATATAGATAGAAATAGAGCTATTGCCAAGATGAAAGTAGCACTTGATGAGCTAATCATACAAGGGATTAAAACTACAAAAGATTTCCATATAAATATGATGAATAATGATGATTTTATCAATAATTTATATGATACAAACTATTTGGCAAAGCATTAATTAATTTTAATTCCAAGCTAAATTAATTTACAATAAATTTAATGGTGTCTAATTTATAAATTAGACACCT # Right flank : TGAGCTAAATTTAGCCTATTTTATGGGCGTTTGGCTATAGTTTAAAGGTCTTAATTCTTCCACTTTGAAAAAAAATGCTAAAAATAGCGAATTTGTGGAAAAATTTAGCTATAATACAAACGCAAATTATACTACAGATTAACTCTTTAGCGTTTGAAATCACCTAAAGGTGTTAACAGATCGGGGCAACTGCCATATGGCACCCCCGGTATCATTCTCTATCATCACAGTAGTTTTTAAATTCACACTGCATACAAGCAGCTATACTAGCACAACTTTGCGGAAATAACTCTTGATTTAACATTTTATTAATCTTATCTATCGTGCTATTAAATTGGGCTAAATCATCACTGTTTATATCAAATATCTTAAATTTAAGATTATTACTACAAATTAGCATTATCTTAAAAAATGGTTTATTAAAATGCTTACTGGCTAGCTTTGAGTAGGCTATAAGCTGCATTTTAGTGCCTTTATTTAGTATTGGCTTGTTTTGATTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACCGAGTTGATTTGTGGTATAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //