Array 1 299071-298472 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB890687.1 Calidithermus timidus DSM 17022 B047DRAFT_scaffold_0.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 299070 36 100.0 36 .................................... GTTTACTCCCCTCCTCCTTCCACCAGCTCCACCAGC 298998 36 100.0 33 .................................... AGTTGAGGTAGAGGCTGCCGGGCCGCAGCAATG 298929 36 100.0 37 .................................... ATGGGGATCTCGCTCGAGGAGGCCCGGCGGGCCGTGG 298856 36 100.0 33 .................................... AGCCTCGAGTCCTCCCTCTCTCTCACCCTCAGG 298787 36 100.0 30 .................................... ATGAATATCAGCAACAATCCGATCAGTGTC 298721 36 100.0 36 .................................... ACTTCGCCTTTATGGCCGATCCCGGCTAGGCAATGC 298649 36 100.0 36 .................................... GTTGCGCCGTAGGGCCAGGAAGTCCCGCTCGAGCTG 298577 36 100.0 34 .................................... ATGTTTATGCTGCATCATAACTTCCTTGCGTTGG 298507 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 9 36 100.0 34 GTTGCGAAGCTTGCTAGCCTCGTAGAGGATTGAAAC # Left flank : GGCGGGCGCTCCTCGAGGGGCTGCCCTGGCCGCGGGCCCGCTCGAGCGCCTTGGCGGCCCTTCTATCCGAGCGGGAGGAAGGGCGTTGAGGTCTTTGAAGCTCGGCTTACCCGCGAGCAGTGGGCCCACCTCAAGGGAGCCTTGGTGGACAAGAAAGAGGACATCCTCGCGGTTTACTTTCTTCCCTCCGAGGCCGTGGGTCGGACCTGGCGGGTTGGTTACGAAGGGCTCAAACGCCTTGAGGACCCCGGCTTCGTATAGCGAACGCGAGGGTCACCTTATACAAGACCCCGATAGCCAAACCAAAGCTTTCCTCGCCCTGGACAGTGCTCTAACCGTATGCAGAGAGACCTCGAGGCCACCGTCGCGTACGCACAGCACCTCGAGGACAAAAACCCCCTCTCCCTCCCCAAGCACCCTAGCTCTACTTGTGCATAGTACCCTCGCGTGCGAAAATGACCCTAGCAGGATCATCCAGCACAGTGTTCGCAGGAGGATCT # Right flank : CCCGTCATCCCCTCGCTATAACCCGCTCCAACCGCCTTATCCCCTCGAGCAGCCCCTCCTCGGGATAGTAGGCGAAGCATAGCCGCAGGGCGTGACGGAAGGAGCCGCTGGGCGAGAAACGCACTCCTGGTTGGAAGGCCACCCCTTCCTCACGGGCCTGCTGGAGCAGCCGGGCGGCGTCTTGCTCGGGGGGAAGTTCCAGCCAGACGAAGTAGCCCCCCTGGGGAGGCTGGAACCGCACGGGTAGTCGGACTGCGCTCAGCGCCTCGAGCAAGGCCGCCAGCCGCCTGCTGTAAACCTTCCGCAACCGCTGTAGGTGGCTCTCCTGCAATCCCATGGCCATGGCCTGGGCCACGACCCGGCCTGTGAAGGGGTTTAGCCCGCCCCCGCTCTGCACTACCCCAGCCCGCTCCAGGCGCTCCAGCAAGCCGGGTGTCGCCTGGACCCAGCCCAGCCGCAGGCCGGGGGCCAAGATCTTGGAGAATGATCCCAGACTGATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGAAGCTTGCTAGCCTCGTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 20948-21829 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB890698.1 Calidithermus timidus DSM 17022 B047DRAFT_scaffold_4.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20948 29 100.0 32 ............................. AAGTGGGCGTCGCTCGTCCCGGCGAAAAAGGC 21009 29 100.0 32 ............................. GCCCCCACGGTGTACCCGGCCCGCTGGGCGGC 21070 29 100.0 32 ............................. CTCGAGGCGGGAGCGCTGTTGAGGGGCAGGTA 21131 29 100.0 32 ............................. GGGCTATCGTTCTTCCCGGCGAGCGAAAGGAT 21192 29 100.0 32 ............................. GCGGTGAGGTTGTCGAGCGGGCCGTAAATCCC 21253 29 100.0 32 ............................. CCGCGGCCTGGTGGCTCGAGCGCCGTCGCCCC 21314 29 100.0 32 ............................. GTCTACCCCGGCCACCCGCTCAATCCCCTACT 21375 29 100.0 31 ............................. TGGCGGCTAGGAGCGAACCCGATGCAGACCC 21435 29 100.0 32 ............................. TCCGCACTTCCTGAATTTTGTGCCTCAGTCCC 21496 29 100.0 32 ............................. CACGAACTTCCCCTTGCCCCGCACCTCCAGGC 21557 29 100.0 32 ............................. ATACGGGCAGATGCCGCAAACCAAGCTGCACA 21618 29 100.0 32 ............................. TTGGAGATCGGACTGGTGCCTGTCAGTCCGAA 21679 29 96.6 32 ............................C CCGCCCCACAAAAGGCTTGCCTCGAATACCGC 21740 29 100.0 32 ............................. TGCGACGCCGGTCCCTGCGCTATCTACTGGAT 21801 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.8 32 GTGTTCCCCGCACGCGCGGGGATGAACCG # Left flank : CGCCACCGATCCCGCGGCCCCGGGCGAGCTTTGGGATCCTGAAGGCAACCTTCAGGGCGGGGTCATGTACGGCCTGGATACCGAAGACGAACGCTAGCTATGGTGGTCATCGTGCTTGAAAACGTGCCCAAGCGGTTGCGCGGGGAGCTGAGCCGGTGGATGCTGGAAGTAAGCACGGGTGTTTTTGTAGGCAGCATGACAGCCCTCGTGCGCGATCTTCTGTGGCAAAAGTGCGTGGAAAAAAAGACCGCGGGCCGGGTCTGCATGATGTACCGCACCAACAACGAGCAGGGTTTCGAGGTTCGAACCCACGGCGACACCACCCGCACCCTTGTAGACTTCGATGGCCTAACCCTGGTGGCTGTGAAGAATGCCGAGTGGGAGCGCATGCACCGAAAGCGAGGCAGGAAACCTAAACCAGGGGCGAATCTTGACAACCAAACTCGGGATTCCGACACTTCCGGGGGGTCGAACAGCTAATTTTGCTGTTATAGTCAAGT # Right flank : GTGAAACTCAGTTAGACGCCGGTTGCGAGACGGGGGCTTGCCCGGTAAGATTACCCAAGTTGCTACCCACCCCATCTTCTCTGTCAACAGCCGGATGTTGTGCGCCAGGACAAAGGTGAGCACCTTCAAACCCCTCCTGCGTCACCGCATGAATCCGCCGGGAAAAAGCCCGTACCTCACGTCGTGCACGCTCCCAAGGGTCAGCGCTGCCTCATGGACGAAGAAGCCATCATCCACCAACAGGTGCAGCTTGAAGCCGTGGAAGTAGACCCCGGGCGCCCGGATGTTTTCGCAGAGGGGGACGATCCCCTGTCGGGACGTAGGAGAAGAGGGCGAGGTTGTGGGCGAAGGCCAGGGTCTTTTGGTGGTGGCCGCCGAAGTGGAGGGCAGCCAGGATGGCGAGGGTGAGGAGGACACTGGAGGGGGTCTTGGTCTGGGGGTCGTCGTTGTGGCCCAGAAGGGGAAGGAGGTCGTCTATGGTGCAGAAGGCCGCTATGGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 162448-162269 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB890697.1 Calidithermus timidus DSM 17022 B047DRAFT_scaffold_3.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 162447 37 97.3 32 C.................................... ATGCAGGCCGAGACCGAGCGCTGCGACGACTC 162378 37 100.0 36 ..................................... GCCAGCAAGTTCTTCCTCCCGCTCAAGGCGAGAGGT 162305 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 3 37 99.1 34 GGTTGCAAAGGCGCTTAACCTCGTAGAGGATTGAAAG # Left flank : CTGCGCTTCCCGGAGGTCGAGGCCGCTGCGCTGCTGGCGGTCTTCGAGCTCGACCTCGAGCTCACCCGTTTCGCCGACCTCCGGTTCGAGCGGGCCCAGGCCGCCAAGGGGTTCTTCCCCGGCTTCACCGGGGCGGTGGAGGTGCACTGCCACAGCGACAGCCTCGAGGCGCAGCGGGCACTAGGAATCCTGCAGGCGTACGCCTTCTACGCTGGGGTAGGGGCCAAGACCGCCTACGGCCTCGGGCTCACCACGCCCTACTGACGCGAGCGCGAACGCCACTTCTCGGCCCAAAGCCCCCTGAATGGGGGCTTTTACTGTCCTGGACGTAGACCAGACCCCACCTTTTGCACACTCAGGCTAAGCTCGCGTGCGTACCCGTCAGGAACGGGTCTCATGCTGCCTCGAGGGCGTCAGTTCGTGTAGACTAGGAAAAGTCCACACGCCGTGTGCGATTTCGGAGCTAGAAAGGCTGTGACGAACAGGATGCCTGATCGGGG # Right flank : CGCTGGTAGCGCAGGTCCGACAGCCCTTGCTCAATTGGTTGTTAACCCCCGCCGGGCCCGCCTCGGGCTTAAGTCGGAGGCGCGACAGGGGCTCAGCCGCTAACCTGCAACTCGCGGAGGTGGCCCAGAGGCCGGCCCCGGGCGAAGCGGCAGCAGCGGGAAGCCAGGGAAGGCCGCATGACCTGCGGCCCTCAAGCGCCTCGAGCACGACGGCTCCACCGGGTGATGCTGCGCCGCTTGGCGCGCGAGCGGCAGGTGAAGGGGGGCGGCGGGCACCGCTGAACGCTACGGTTTCCGTAGCAAAGGATTGCAAATTAGAACCTTGATATGTTATCATCGTAATAGATGTAAGCAGTATGCTCTAAACAGGAGAACGGCCCCTCAAGCAAGAGCAGGAGGAAATTTTATGGCGAACGAACCTCACTCCCCCTCGGCCCAGATTCACCCCGCCCTCTCCATCTCCCAGCTCCGCGGAAGCTTCCGCGGCCGGGTCATCACGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGCAAAGGCGCTTAACCTCGTAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.70,-3.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 2 172721-173684 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB890697.1 Calidithermus timidus DSM 17022 B047DRAFT_scaffold_3.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 172721 36 100.0 33 .................................... CCGCATCCTGGCCGCCGGGAGGCGATGGGGCAA 172790 36 100.0 37 .................................... CTCCGGGAGCTTCCCGGCCTCGACCTGAGCGGGGCTC 172863 36 100.0 35 .................................... GGGGTAGCGTCCACGATGTCCACCGGCGTCACCAC 172934 36 100.0 36 .................................... GTGAACTTCTTCCGGGTGCTGCGCTCTCAGCCCGAC 173006 36 100.0 37 .................................... ATGATACGGGGTAGCTTCAGCGGACTACGCCAACTCG 173079 36 100.0 34 .................................... TGGGTGCGGGCCGCTGAGTTCGCTGCCATGCAGT 173149 36 100.0 35 .................................... AAAAAACTGGAAAGGAGATACCGTGAGCGATAAAC 173220 36 100.0 35 .................................... TGCCCTCCTGATGGGGAAGGCCGAGGGCCTGGAGG 173291 36 100.0 34 .................................... TACATCCGCCCGCCCAGGGACGACATGCCCATCA 173361 36 100.0 36 .................................... AGGATCTACGCAGACAACCTATTCGTCAAAGGTCGC 173433 36 100.0 36 .................................... GCGATCAGGATGCGCCGGTCCAGGCGGTGGGCGATC 173505 36 100.0 35 .................................... CTGCTGTGCCCGTGCTACACCCCAGGCGAGCCTTG 173576 36 100.0 37 .................................... TAGCGCCAGATCCATCCGGTTCCATATCAGTGCCCAT 173649 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 14 36 100.0 35 GGCGTAAGCTCGAGATACTCCGTAGGAGATTGAAAC # Left flank : ACGACACCCCGTCCGACTCCAGGCGGGCCAAGCTTGCCCGCCTGCTCAAAGGCTTCGGCGAACGGCGACAGTTCAGCGTCTTCGAGTGCCGGCTCCGCCGCGAGCACTGGGCGCTGCTCAAGGCCAGGATTGAAGACCTGGTGGACAAGGACGAGGACGTGCTGGCCGTCTACTTCCTCCCCCCCGAGGCCGTGGGGCGCACCTACCGCATCGGGCACGAAGCCGTCAAGCGCTTGGACGAGCCCGAGTTCATCTAGAGCCCTCGAGCGCGAACGCCACTTCACCCGACCCCGGCCCCCGGGCCGGGGTTTTTCCCGTCCCCGGCAGGCCAAATTCCATCTCGAGTGCCCGCCTCGGTCAGGTGCCGCGTGCGTCACCGTGCCCGACGGCAAAAACGGCCCCTCGAGGTCCCGCGAGGCACTGGCTCGAGGGGGCGCTCGAGGCCGCATGCGAATTCGAGTCCGAGAAGGCCGACCTGCATTTGCCTTTTTCGGGAGGCT # Right flank : CATGGTCTGGCAGGCGCCTCGTGCCACTCGTGGGCCAGCAGCGCATAGCAGGCTATATCCACGAAGCCGTAGGACCACTTCCAGTCCTGGCGGCGCACACCCTCGAAGGTGAAACCCAGGCGCTTGGCCAGCTGCCCGCGCAATCTGCTCCTTCTGCAGCCTTTGGAAGGTGGCAAAGGCCAGCTCGAGGCTCGGTACTTTGGTCTGAGCGACGCCGTGGAAGTGCTTTATGAGTTGCATCTAAAGAGGCGCTAATCCATCGGGCAGTTGACCAAGATCCACTCAGCGGTTTAGGATCCTGGACGGGCTTCAAAACCCAAACCGTTATGGAGGTTGATATGCGTCGATTTACGCTGTTGGCCGCGGTCTTGCTGGTACTAGCTGCCTGTACCTCCAGTCCGCAGGTCGCCGAGGACACCGGGGTCCCCGTCTTGGGGCTGGACAACCCCCAGGCGATCCCTGGGCAGTACATCGTGGTCTACAAGAAGGACGCCAGTGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGTAAGCTCGAGATACTCCGTAGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : NA // Array 1 238063-237585 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB890700.1 Calidithermus timidus DSM 17022 B047DRAFT_scaffold_6.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 238062 35 100.0 40 ................................... AGAAAACGGCCCCCAACCACGACCCCGAATAGGCGATAAA 237987 35 100.0 37 ................................... TGGTATCGGCCTCGCTCAAGCAGAATCCGACAAAAAG 237915 35 100.0 40 ................................... CGGCGGTAGGCGGAATCGCGCGCGCATGCGCGTGGGGCCG 237840 35 100.0 37 ................................... AACAGATCGACCGGGAGCCACAGCATTTCGTGATTAC 237768 35 100.0 38 ................................... ACCTCCTCCTGCGCCAATTTGCCGGGCCGCAACATGCA 237695 35 100.0 41 ................................... TCTCTAGGTCGAAGGACACTGTCGAGATATCCTACAGTCTT 237619 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 7 35 100.0 39 GTCGCAAACAAAAAGCCCCGCAAGGGGATTGCAAC # Left flank : GCGATCGCACCCCCTCACCAGAAAAAGCGGCCACTATTCCCGTTTGGGACAATACAAAGCCCGCTTGCCAAAATGCGGCATTATGTTTTGCGCAAAATGCTATAATCCCCCTAGCGAGGTCCCCTCGAGCGTACCTTGAAAACCTATCTCCCCCTTTCTCATGGTAAATCCCTGTCACATAAAATATAAATGTGCAGGGAAGTAAGCACCCATCGCAGCAAACGCCACTTTTTTCGCGGTTATCCACAACCCACCTGTGGATAACTCGCACTTCTCATAAATCTACCCCCTGGCAACCCTGTACAGGACAGCGTTCTATGGGGTATGC # Right flank : CCAGACACCGGATTCAGCGTGACCTGGCATATGATGGGGGGACATTGGCTGGCTTTGATGCGTCCGATGTCAGGGCTCTGGCGGCCTCCGAAGTGCAGGAGCGGGGTTACCAGTTGTTTATTCGGGGAATGGTGCTGAGGGGCTCCCGGCAGGGCCAACGTTACAGCGCCCGCGTGCAGGGCAGCGCGCCCTACCCCTACCGCACCTGGGTCGATCTGGAAAAGCAGGACTGGGGCTGTACCTGTCCTTACGGCTGGGGTCCGGTGTGCAAGCACGTCGTGGCCGTGGCCTATGCCATCCAGGAAGCGCCCGAGATCTTCCAGGCCAGGCGCAAGCGCAAGCAAAAGCCTACCGACCTCCAGCAGTTGGCCCTGCAAGAGCTTTCCGACGAAGCCCTCCTCGAGGTCCTGTGGGAACTGGCCCAACAGCGCCCGGAGCTGATGGAGGAGTTCGCCTACAACCTATTGCAGCGCAGCGAGTAGGGGCATCCCGCGGCCGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAAACAAAAAGCCCCGCAAGGGGATTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 72539-72140 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB890702.1 Calidithermus timidus DSM 17022 B047DRAFT_scaffold_8.9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =========================================== ================== 72538 34 100.0 37 .................................. CAACTCCCGCCACGACACAGGCTGTGCCGCCCATAAC 72467 34 100.0 37 .................................. CCGCCGTAACACGGCCCGGATTCTGAGGGTATCTAAG 72396 34 100.0 43 .................................. CAGGCCAGATGGAGCCGCAGTTCACTGACCACGTCAGGGATAG 72319 34 100.0 39 .................................. CTCGATGTAGGCCGGCTGGGGCCGGTCTTGCCCGCTGTG 72246 34 100.0 39 .................................. ATCTTTAGCCGCCGCCAACCGCGCTTCCCAATCCTCACG 72173 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== =========================================== ================== 6 34 100.0 39 TCGCAAACAAAAAGCCCCGCAAGGGGATTGCAAC # Left flank : GCGATCGCACCCCCTCACCAGAAAAAGCGGCCACTATTCCCGTTTGGGACAATACAAAGCCCGCTTGCCAAAATGCGGCATTATGTTTTGCGCAAAATGCTATAATCCCCCTAGCGAGGTCCCCTCGAGCGTACCTTGAAAACCTATCTCCCCCTTTCTCATGGTAAATCCCTGTCACATAAAATCTAAATGTGCAGGGAAGTAAGCACCCATCGCAGCAAACGCCACTTTTTTCGCGGTTATCCACAACCCGCCTGTGGATAACTCGCACTTCTCATAAATCTACCCCCTGGCAACCCTGTACAGGACAGCGTTCTATGGGGTATGC # Right flank : GGCCTGTAGCATGTTGGTATGCAGGAGATAAAACAGGTGCTGATTGCTACGGTAGGCCATAGCCGCCCCCCTGTGGAGTTTGCCCTCGCGGAGCACGCGCCGGATGGGGTGGTTTTTATCGCCAGCCAGGGGTCTCAAGTGGTGGCGGCAGAGCTAGTGCGGGAATATGGCGCCAACCTGCGCCACCATACCTTTTTGCTAGACGACCCCGAAAGCTTCATAGATAGTTACCGCGTGGCCCAGCAGGCCTTGCGCAAGGCGCTGGAGTGGGAGGCCCGCAGTGTGGTGGCCGATATAAGCGGGGGAACCAAACCCATGGTGGCAGGGGTGGTGCTAGCGCTCTCGGGGCAGGGAGTTACGTTTAGCTACGTGGGGGGCGAGCAGCGCGACGAGGCAGGAAGGGTTGTTAGCGGGGCTGAGCGGCTGAAGGTGCTGGAAGACCCCACCACGCGCTACGGGGTGCGGGAATGGGGCGAGTTCGTTCAGGCTTGGAACATTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCAAACAAAAAGCCCCGCAAGGGGATTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA //