Array 1 36166-34162 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYUN01000009.1 Bifidobacterium pseudolongum subsp. pseudolongum strain 2054B Contig_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 36165 36 100.0 39 .................................... GGGTCCGACCGGCTCGTGTACGGCGTCTGTTTCGTGGAC 36090 36 100.0 35 .................................... GCATTTTAGGTCGGTTCCTTCTATGAACGCCGCAA 36019 36 100.0 38 .................................... ACGACGCTTTCACGTCAGACCATCGAACGTTCGACCGT 35945 36 100.0 38 .................................... CTGTCCTCAAGAAGGCCAAGCATCGACACGAACGGCAC 35871 36 100.0 36 .................................... GATTCATGCCACCCGGACGGCGGCCTGTACACCGTG 35799 36 100.0 37 .................................... GCGCTGAGCTCATTGAAACGCTGGAATGCGCTGCCGA 35726 36 100.0 35 .................................... AACACGGACGGCGCCACCACGTTCACGCTCGACAA 35655 36 100.0 38 .................................... GAGCGTCCCACCGAGATGACCCTGTACACCACCGACCG 35581 36 100.0 37 .................................... GGCAGTCTGGCTGGAATGAACCGGCCCGGCGGCTATG 35508 36 100.0 36 .................................... CCCACAACCGAGTCCGAGCAGACTTACGAGCACGCA 35436 36 100.0 39 .................................... TCCAAGGGGCCGTCAACACTCCCAGCACCCTACCCCCGC 35361 36 100.0 36 .................................... GCGTCCGGCACGCGCGCCGTGAAATTCACCGTGAGC 35289 36 100.0 36 .................................... TCCACACCCATGCCGGAGAAATTCTTCGACACGACC 35217 36 100.0 37 .................................... CTGCGTATCCGTGAACGGCACGAGACCGCGATGCGCC 35144 36 100.0 39 .................................... TTTGGGCGGATTTGTGCGCTCGCGAACGAGAACGCGAAA 35069 36 100.0 36 .................................... AATAAGGAATATCTGGGGGACGATGTGTATGGCCGC 34997 36 100.0 39 .................................... ATCGCCAACATCCTCGCTGGCACCTACCAGCTCATGCCC 34922 36 100.0 35 .................................... ATGCGCGCGCAGATGCCCGTGCCCACAGCGGAGGA 34851 36 100.0 37 .................................... CATCATTAAACCGCAATATGTCGATGATACAGCACTG 34778 36 100.0 36 .................................... ACGGTTTCCCATTCGTCTACGGTGTGTCTGGTCATG 34706 36 100.0 35 .................................... TTCGCCGATGGCACGTCTGCGTCGGGTGCGAATTT 34635 36 100.0 36 .................................... ATCAACAACGCGGAAGTCGTGAACACGTTACGTATC 34563 36 100.0 35 .................................... AAATCCGCACAGGCAGCATCCGGTGATGACACCGC 34492 36 100.0 38 .................................... ACCGTCCAGGCGGGCGACACGCTGAGCGGCATCGCCGC 34418 36 100.0 40 .................................... GTTCGATCAGACGAATGTGAGTATCGCGCAGAACTCAGGC 34342 36 100.0 38 .................................... GTCGTCGGGCAGAAACGCTTCGTGCAGACCATGCGCAA 34268 36 97.2 35 ...................................A AGGGCCAGCAACGTCGTGGAGATCCATCAGGAGGC 34197 36 91.7 0 ...........T.T.....................A | ========== ====== ====== ====== ==================================== ======================================== ================== 28 36 99.6 37 ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG # Left flank : ACGCACTTCAACGATGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCAATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGCGGACGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAAGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAAGTGCTGGGCGTGGGGGATGCGCTTGCCGATGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGGAGCTATCCCGTGCGAGGGCTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGTTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT # Right flank : ATGTACTCCGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCGATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCCGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTCGCCTTGCAGGCTGCATGCATGGAGGATATGGGTTATCGAGTAGATGGGACTGAAATATTCTTTACCTCGCACCATCGGATTGTTCCTGTTGAACTAAGAAAATCCGATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //