Array 1 1424-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRSA01000021.1 Dellaglioa algida strain NAGRM3a-7 sequence21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1423 36 100.0 30 .................................... ACGGAGAATGAATAATGACAATGACTTACG 1357 36 100.0 30 .................................... CTAATGATTATGATGTTAATTCAATGTTTG 1291 36 100.0 30 .................................... ACTTTAAAACCAAGTGATTTGGCTTCTTTT 1225 36 100.0 30 .................................... AATATTAAAGTACCGTTTGGCTTCAATACT 1159 36 100.0 30 .................................... CACAACCGTGATCACCGCAACTAAAGTATT 1093 36 100.0 30 .................................... TAGCCAAAATCATTCGTTGTTCGTGCGATA 1027 36 100.0 30 .................................... TCTACTTCTATGGGTAAAGTTTCGGTCGTT 961 36 100.0 30 .................................... AGTACATTGTATCACTATCCGTTACTAGTG 895 36 100.0 30 .................................... TGTCTTCTTCAATCTCACTTAGAATATTTA 829 36 100.0 30 .................................... TTGATTTTTTCACACTATCAATCCTTCCTA 763 36 100.0 30 .................................... GTTAACGCGGTTAATCGTTGTTTTTGGTTG 697 36 100.0 30 .................................... CTAAATTGGTATAAATAATTTGATAAGCAT 631 36 100.0 30 .................................... AAAAAATAGTACAGCTACTTAATAAATATG 565 36 100.0 30 .................................... GTTTAGTTTTGGCCAACTTGCTTAGCTCTA 499 36 100.0 30 .................................... AAAAAATAGTACAGCTACTTAATCAATATG 433 36 100.0 30 .................................... CAATTTCAGATTTCGCAGTTGAAACATGGA 367 36 100.0 30 .................................... GATTTTCCGTAATCTCTTCTAATTGGTCAT 301 36 100.0 30 .................................... GCCAATTTCTAGCTTTTCACGTTCATCATG 235 36 100.0 31 .................................... TTTCTCTCCTATTCTCCAAATACTTCTTCTG 168 36 100.0 30 .................................... CGTTAAAAGGTCAAGTAACCGAAGAAAACG 102 36 100.0 30 .................................... TAATAAACAGTAATATATAAAGGGGAATTA 36 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Left flank : ACTATTGATTTGAATAAATTATTTCAAAGTAGATTAACGAAAAAAATTATTGGCGATTTGAGCGATGGACAAATCCAAAAATTAAATCAATTGGACACGGAAATGCGCACCGCCATTTTGGATATTGCTTTTATGTATGATATAGCTCTAGACGTCAGTCAAGAGTGGGATATAGCAAGAACGATTAAATTTTTTAATTTAACATTTTCTAATGTCGTTCAAGGTAACTCATATGGTATAATAGAAAGTATAGTATTAACCGCTTCAGAATTAAATGAAACAAAAATTATCGTGTTAATGAACGTTTCGCACTATCTTAGTATCAGCCAATTCAACGAATTGGTAAGACTAGTTGCGACATTAGATGTAAAACTCTTTATCATCGAATTTTCAGAAATAATTGATGTAAAAAAGTATCAAAACTGCCGGTATTATCATATTGATAATGACCGCATAGAGTGGCGATACGAATAGTATGGATATTTCATGAGAAAAAAACG # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 39-272 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRSA01000001.1 Dellaglioa algida strain NAGRM3a-7 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 39 36 100.0 30 .................................... ATGAAAATCAATATGACATCGCTGAAAAGG 105 36 100.0 30 .................................... AAATGAACCGCGAGGACTTACTTGATTTTT 171 36 100.0 30 .................................... TCTCTGCCTATTTTCCTGCACGATCCAGGT 237 36 86.1 0 ...............................GCGAT | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 30 GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Left flank : TTATTAGCAAATGAACCGTGAAGATTTGCTTGATTTTTG # Right flank : TTTCAAGTGAAAATGGATTCAAGAAAGAGGCAACCAACGCCCCTTTTTGAATCCATTTTTATTATACATTCGGTAAGATTTACATCGATAAAAATATCTCAGACTATCACATCTCAAATAAACGGCATCATAATATCAGAATTTTCAGGTCTACGATCTGTCTCCAATGTTGCTATTTGATGAATAATACTATCCAACGTTATCTGACTCATTTCTTTCTCAATAGTTTCTTGAAGTAACGCATATTGTTCGGATAAAACATCTTGAATGTTTCCACCGACAAAGCAGGCAGGATTTGTTTTAGGATCTACTTGAATTAAATTGGTATCATCCTCAATACTTTTGTAAATATCTAATAAACTTATTTCTTTGGGTGACTTTGCAAGTAACGCTCCAGCATGCCCATTAGTAGTGATAATTAAATCAGATTTTTTTAAACGACTCATAATTTTTCTGATATTTGATGGATTCGTTTCAACGCTATCTGATATATTTTGACT # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTTTATTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //