Array 1 441-10 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRJU01000058.1 Alkalihalobacillus okhensis strain Kh10-101 contig58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 440 36 100.0 30 .................................... AAACAATCCATTTGATATATGCGATTCAAT 374 36 100.0 30 .................................... CCTATACCCGATAAGAAAGTAAAAATTTCT 308 36 100.0 29 .................................... CATGATAAAGAGTTACAGAAGGATTAGTG 243 36 100.0 30 .................................... CTATATATTAGTGCAGAAACAGGGAGAGAA 177 36 100.0 30 .................................... AGACCAGGACAGAACCGTGAAACGATTTAT 111 36 100.0 30 .................................... TAACTTATGAAGATCTATACCAGAGTAATA 45 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 ATCATATCACAGCAACGGATTAGATGGAGATATGAC # Left flank : TTTTATTTTTTGACCTTCCTACCAAAACAGCTAAAAATAAACGAGATTACATTCGTTTTCGAAAGTATCTTTTAAATGAAGGATTTGAAATGATGCAATGGTCCGTCTATACAAGAATCTGCAACAACCATGAATCAATGGAAAAGCGAATGAATCTAGTTCAAAAAAACTTGCCCCCTAAAGGATCAGTCCGTGCCTTGCCTGTTACCGAAAAACAATATACTAATATGCGACTTATGCTAGGTGAAAAGACTTCTAACGAGGAACATTTAAAAATTAATCAAATGACGTTATTTTGAATAAAACTGACAAACATTGGAGAAAATGATGATTTTGTGTATATGCAAAAGGTTTTAGGTGAATACTATAAATAATTAGTACAACCGAACGGGCTTTTTTGAACAAAAGATAAAATATATCCTTAATGACAATGTAATCCTTTGTTTTTAAAAGTCAAAAAAGCCCCATACACTTGATGTAACGGGGTTTTTTGACGGTGT # Right flank : CAACCTAGAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATATCACAGCAACGGATTAGATGGAGATATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 8862-10203 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRJU01000072.1 Alkalihalobacillus okhensis strain Kh10-101 contig72, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8862 36 100.0 30 .................................... ATTGGACAAGGAATTCATTATCGGCAATGC 8928 36 100.0 30 .................................... ATAACGCTAATGATTATAGATCAAGCAAGG 8994 36 100.0 30 .................................... GAAGCTATTAGCCTAGATGGTGACAATTTA 9060 36 100.0 30 .................................... AAGGCATTATCATTACTTTTATGATCGGAA 9126 36 100.0 30 .................................... AATTGCTCTTCAATCGCATCTTGATTAAGG 9192 36 100.0 29 .................................... GAAATATTTGGTCAGTGAGATGACCTATT 9257 36 100.0 28 .................................... TCTTTTGTTTATAATAGTAATGTGGACA 9321 36 100.0 29 .................................... TTTAGCAATGAATATTAGAGTCAGTAGGC 9386 36 100.0 30 .................................... CGCAAACAATATAGCCGTAGGCACGCCGGA 9452 36 100.0 30 .................................... TCAATAGCATCAACGGTTCTCTAATGTGTA 9518 36 100.0 29 .................................... ATGAAAGGAATTATTCACGTATGTGAAGG 9583 36 100.0 30 .................................... AGGTTGCGAAAGATTTCGATGAATCCACCG 9649 36 100.0 30 .................................... CGGATGCTTCTTCTCGGCGTCAACAAATCA 9715 36 100.0 30 .................................... CGGTTTGACATATAAAGTGGAAAGTGTGAT 9781 36 100.0 30 .................................... TCGTAATCATTACATTGCCCTTGTGAGCTC 9847 36 100.0 25 .................................... GGTCAAAAGGAGGTTGTGTATAATA 9908 36 100.0 30 .................................... GGCGTTTATCGAATGTATGTTAAAGAAGTT 9974 36 100.0 30 .................................... TTAATAATCTCTGAAGCTCTTCTCACAGCG 10040 36 100.0 27 .................................... AAATCATAATGACTAAGGATTACCTTA 10103 36 100.0 29 .................................... ACTTGTAACTTCCGTCCATGAAGTCATTG 10168 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 29 GTCATATCTCCATCTAATCCGTTGCTGTGATATGAT # Left flank : AATGATCCTTTTAAGATACTCAAAACCCGTAAGAGATGCATCAAACTCAAATGGTTTGACTAGAATATCCCCATAAAAAGTACATATCAAAGCTTTTTGCGTAAACTTCGCTGCATCAATTGCCACTAGCATTAGATTTTCTGTTCCTGTCTCTCGTACAAACTCTGCCCATCGACTTCCTTTTTTACCTTGAATATGCTTAAATAAACTATATGCCATTGTTTTCATCTCCTTGGGAAGGGTAGTAATATTGGAAGTTCTGTGATAGGTACTTCCATTTTACAATGAAAACGATGGCCTTTTTTCTGTTTATTTAACTTATTTTCTATACTAGGTTCCTCGTCCCAGCTATGCAGACGTTGTGTATAACACAAAAAAGGTGAATAATCCCCTGTATAAAGGGAGTTATCCACCTTTTTAAAAAGTTATGTTAAAAGGTGATTTTCACACTATTCCAAAGTCAGTAAGTGGGTCAACGTACCTGTCCCTCGTGTACTAGT # Right flank : GGAGGAAGCAACA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATATCTCCATCTAATCCGTTGCTGTGATATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //