Array 1 282138-283264 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNLS01000010.1 Pseudomonas aeruginosa isolate PSA-11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 282138 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 282199 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 282260 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 282321 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 282382 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 282443 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 282504 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 282565 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 282626 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 282687 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 282748 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 282809 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 282870 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 282931 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 282992 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 283053 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 283114 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 283175 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 283236 28 79.3 0 A..........A..C..-.....A....T | C [283240] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 292437-294175 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNLS01000010.1 Pseudomonas aeruginosa isolate PSA-11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 292437 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 292498 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 292559 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 292621 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 292682 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 292743 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 292804 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 292865 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 292926 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 292987 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 293048 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 293109 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 293170 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 293231 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 293292 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 293353 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 293414 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 293476 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 293537 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 293598 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 293659 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 293720 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 293781 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 293842 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 293903 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 293964 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 294025 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 294086 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 294147 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //