Array 1 4560711-4559403 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNTW01000002.1 Streptomyces griseus strain DSM 40236, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4560710 29 100.0 32 ............................. ACTACGCCCGCAGCCCGTACCCGATCAAGCCG 4560649 29 100.0 32 ............................. CACGCACACACGGAGGCCCGCCATGGGTGACA 4560588 29 96.6 32 ............................T CCTCGCCGGAATCCTCCTCGGCCTCTCCCAAG 4560527 29 100.0 32 ............................. ACCCCCTGACCCCCGGGCTGCCCTGTCGCCCC 4560466 29 96.6 32 ............................T TCGGCGGGGGTGTTGATCGGGGGCCCGTGCAT 4560405 29 100.0 32 ............................. ATGCCCCAAGCGCCTATGTGCCGGGTCTACGA 4560344 29 96.6 32 ............................T CCGCGGCGCTCGTACGGCATCCACTCGGCCCG 4560283 29 100.0 32 ............................. TCGGCCTGTGTCAGGCGCCCATGTTTCTGCCA 4560222 29 100.0 32 ............................. GTCCACTCGGGCTCGACGCCTTGTTCGTCGAG 4560161 29 100.0 32 ............................. CGGCCGGACACGTACTGCCAGATCTCCGGGGA 4560100 29 96.6 32 ............................G ATCATCGGCTGGACTACAGCCGCTTGGGACTG 4560039 29 100.0 32 ............................. TGGACGCTCAGCAGGGGGGACATCGGCGTGAG 4559978 29 100.0 31 ............................. AGGCCCTTGTGGGCCTCTTGTTTCGTGATCC 4559918 29 100.0 32 ............................. CTGCGGCAGATCGCGGGCTCGTGGACCGTCCC 4559857 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 4559796 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 4559735 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 4559674 29 100.0 32 ............................. TTCTCCGGCGCCGACCAGGCCCGCACCGTCAT 4559613 29 100.0 29 ............................. GGGGGCAGCCTGTTCCCGTACGCCGACGC 4559555 29 86.2 33 ..C..G...C..............A.... CCGAGGACGGACGCGCGGGACTTGGTGCGGCCG T [4559548] 4559492 29 93.1 32 .............A.......G....... AGGTCCCGGCCGCAGTAGTCCTCGACGAGCCC 4559431 29 93.1 0 ...........................TG | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.1 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GTCATCGTCCTCACCAATTGCCCGCTGGGCCTGAGGGGTTTCCTCACCCGCTGGCTGCTGGAGATCTCCCCGGGCGTCTTCCTCGGAGCCCCGTCCACCCGCATCCGTGACCTTCTGTGGACCGAGGTACGCACGTACGCCGGCCAGGGCCGTGCCCTGCTCGCCTACCAGACGGACAGCGAGCAGGGCTACGCCTTCGAAACCCACGACCACACCTGGCACCCGACCGACCACGAAGGCCTGACACTCATCCACCGCCCGACCGCCCGCGTCCCACGCGCGGAAAGCCCGGGGAGCCCGGGGAGCCCGACGGTCGATGTACCCCGCCAGGGCTGGAGCAAGGCGTCGAAGCGACGGCGGTTCGGGGGCGGGAGGTAGCCGGGGGTGCGAGGGCAGGGATGGACCGATGTCCGATAGAGGACACAAGGACGGATATGCCGGAATTCGGAGAAGTGAGTAAAAACAGGACTCCGTGTACATAGAACACCAGGTCAGCGAGT # Right flank : CCGCAGACGGTCAGGCCCGTGTGCGTGCTCTCCGTCTCCTCAGGTGCGAGGTCGCTCTCTGGTCGGGCGGCTCCCGCTCTCCCGCTGGACGCCCAGGGGGCTCACGGCGGGAAGCCTGCGCCGGTCGTCGCCCTGCCTTCGATCGCGGTCGCCGCCGCCCGTCGCGCTGCGGTCGGCGTACGGCGGAACGGCAGAGCGCCCGGCCGCCGTACAGAGAAGGTACGGCGGCCGGGCGCTCCGGTTCACGGTTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACAGGGCCTGCTGGTCCTCCGCCGCGGTCAGGGGGGATCGCGCGGCGGTGACCCCACAGAGAGGCCCTGTTCCGGGCCCTCCGGGTCCTGCCTGGTCCCGTTGGGCTCGCTCTCCATCCTGCCGGGCGGCGGGAGCCGTGTGGTCGGGCGAAAGGCCTCGATGGTGGGGACGTAGGTCCCTAAAAGACGCATCAGTGATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4571760-4570693 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNTW01000002.1 Streptomyces griseus strain DSM 40236, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 4571759 29 100.0 32 ............................. GTCACCGCCGTCGACATGAGCGACGACCTGAC 4571698 29 100.0 32 ............................. CACCGGTTGGACCGACAGCGCCGGCCGCGCCT 4571637 29 100.0 36 ............................. ACCGGGCAGGACGTCCTGACCCGGGTGCGCGCCGAC 4571572 29 100.0 32 ............................. ATCGCCGAGGCCGACACCTACGGGCCCGCCAC 4571511 29 96.6 32 ............................G TGCTTGAGCAGCCCGAGCAACGTTGTCGCCGA 4571450 29 96.6 32 ...........C................. TCGGGCGGGCGGAGCGGGCGCGCAGCACCCGG 4571389 29 100.0 32 ............................. CGCGACCTGAACCGCATCCTCGGATGGCCCGA 4571328 29 100.0 32 ............................. TCTCGCCCCGCCCCGCCGGGCCCCGACCGCAT 4571267 29 100.0 32 ............................. GGGCGGGGACTGCGTATGGCGGGCCCCCTCCA 4571206 29 100.0 30 ............................. GGCGCGCAGTCCCATGGCCGCGCCCCTCTA 4571147 29 100.0 32 ............................. GCGACACCGCCCCTGACCACTGGAACAACACC 4571086 29 96.6 32 ..............C.............. CCGCCGCCGGTGAGCCAGCCGAGGGGGATCTC 4571025 29 100.0 32 ............................. CGCCGACCGACTGCTCAAGGCCCTGCGCGACG 4570964 29 100.0 32 ............................. TCGGCGTGACCGGACCTCAGATGATGGGGGCC 4570903 29 100.0 32 ............................. TGACGCTGACGCAACGAGCCCAGCAGCGCCCA 4570842 29 100.0 32 ............................. AACACCCTGTTGTAAGAGGTTGATGTGAGCGA 4570781 29 100.0 32 ............................. GACGACGAGAGGTCGTGGTCGTAGGCGAGCAT 4570720 28 93.1 0 .....................C.-..... | ========== ====== ====== ====== ============================= ==================================== ================== 18 29 99.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CCCCGCGCCTTCCTCCATCACCGCCTCACCCACAAAATCCCACCCCGGCTCACCACCGACCATGCACAACCCCCCGCCCCCACCCGCCGCATCCTCATGGAATGCACCGACTGCGGACGCCCCGGCCCACCGGAAGCCCTCCCCGACGGCCTCTGTCACCCCTGCCGCACAACCCACACCGCAGACCCCGAAAACACACCCCACCCCGCCGACATCGCCGACATCAGGGCCCACATGAGCAACCTCCGCAGCCTCCTCAAACCCGTCTGAGCTCAACAACCCGCCTGCCTCACAGCCCCGGCACGGACAGGCCTCAGCGAGGTGCACCGACGTCCTCCTTCAAGAGGCCGCCTCTCGCCGCCTTGGAAGGGCAGAATCACTCCCGACACGCTTAAAGCTTCGAGCAGGCCTATGCACACCAACCAGAGGGCGATATGTCCATTTCTCGGGAAGTTGTCAAAAAGCACCACGCGCCTGAGTAAACCCGCAGGTCACGGACT # Right flank : ATCCGGTCGACGGGGTAGAAAGACGCCCCCCTTTGCATGGGCCCGACGCGCAGGGGCGCTCCCCCACAGCACACTCGATCAAATACGCGCACTTGTATTCACTCTCGGTCATCGCGACCGTGCGGGACGTCGACGATGTCCAATACGCCCATGAGCCGCGATCATCCGGAAAGCCTTTCGGCATACGCCCGCCTGTCCCCCGTATCCCGCACCGCCTGGGGCAAGCACGATCGGCAGACCGAGCAGTGGCTCCCCCTCTGGCGGCACATGGCGGACAGCGCCGCTGTCGCGGAGCGGCTCTGGGACCAATGGGTGCCCGACAACGTCAAGGCGCTCATCGCGGACGCGTTCCCGCAAGGCGCTCAGGACGCCCGGCGAGTGGCCGTCTTCCTCGCCTGCGTCCATGACATCGGAAAGGCCACACCCGCCTTCGCCTGCCAGGTGGACGGGCTCGCCGACCGGATGCGGGCAGCCGGGCTCTCCATGCCGTATCTGAAGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4575970-4574903 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNTW01000002.1 Streptomyces griseus strain DSM 40236, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4575969 29 100.0 32 ............................. CCGTTGGCTGACCAGCACGGTTCGCGCGCGAT 4575908 29 100.0 32 ............................. ATCAGCGGCCCTGGAGGGTCTTGGCCACGCGG 4575847 29 100.0 32 ............................. ATTGCTACAACCCCCCAGAGTTGAACATGCGC 4575786 29 100.0 32 ............................. AGATCGGGACCGTTGGCCGTGGGCACGTTCTC 4575725 29 100.0 32 ............................. GTCGCCGAAGCAGTTCGCATCATTCGACCGGA 4575664 29 100.0 32 ............................. CGCCAGCGACAAGTTGATGTCCCGCTCTGCAA 4575603 29 100.0 32 ............................. CTTACGTCACTTGCATGCCGCGCGGGAGGATT 4575542 29 100.0 32 ............................. CAGAGGCACGGTGATGGCAGCGTGGGTGGAGG 4575481 29 100.0 32 ............................. TGCACTCCGTCCGCGACGCCCACGGCCGGGTC 4575420 29 100.0 32 ............................. GACTGCGGCTCCGTGACCATCGGCACGACGAC 4575359 29 100.0 32 ............................. GATGTCGGCGACGGCATCCGGTCCGTGGCGTC 4575298 29 100.0 32 ............................. CACTGCGACGCCAGCTCACTCGATGACCCGAT 4575237 29 100.0 32 ............................. GGACCGCCGTCGGTGATCACGGCCGCCACCAG 4575176 29 100.0 32 ............................. GCGGCAGCTACCAGTTCCGTGGCGTCGACTCT 4575115 29 100.0 32 ............................. CGGCAGGGCCCCAGGAATTCGACAATCGCCAG 4575054 29 96.6 32 ........................C.... GGAGCCGCGAGACGGCCGGCCGCACCCACCGC 4574993 29 100.0 32 ............................. GAGCACGACCGTTCTGCGCTGTCGTGAGTCTC 4574932 28 82.8 0 ..................TTC...C-... | G,C [4574905,4574912] ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : TACAGAAACCCCCTTGATCCGCGGAGACGCGATCAAGGGGGTTTCTGCGTTGGGTACCTGCTCCATGGCCCGAAGGCCATGGCTGACTAGCGGCCCTGCCCATGGCGGGACCATGCGCACGTGCGGCGTCCGCGTACGCGCCTGCGGACGAGACCACCGCAAGGAAGTCCGCCGTATCGGACGCGCTCACGAACCACCTGTCACGCCCCCTCTCTCGGCTGACCGTCATTTCCCCAACCGAGATCGCCGCCGCCGACGCGTCGAAGCCGCTGAGATGCGAGCCTGGACGGCCACCAAGCGTCCTGGCCGCGCTCGCGGTTGCCACGGTGACCACCACTCTCTTTTCAGGAGGCTGCTCTTATGGACTGAAGAGAGGCAGAATGACTGCTGCCGCACAGCGCTCTGCGAGTACGATCACCTTCGAGGTGGGCGATATGTCTCTTTCTGAAGAAGTAAGTAAATTCAGCTCCGTCACCTCATAAAACCGCAGGTCACGAAGT # Right flank : GTGATCGTTGCGTAGACGCGCGGGGTCCACCTCAAGAGCGTCCGCGACCGCTTTGAGCACCTCGTCGCTGGACCGTCGGACACCTCGCTCGATGGCACGAACCATGGCATAGGAAACGTGGGGGGCGCCGCGAGTTCGGTTTGTGTGAGCCGGCGACAGGCGGCGATTCGCCTGCCGATTTCCTGCGGACTACCGAAAGACACCCGCTGACCGTACGCACACGAAGAGTTTCCGGCGGTAGATTCCTCTACTTCTGTGCGATCTCGATGAGTTACGTCAGTGACTGGATCACCCAGTCGGCAGTTGCGTGCACTTGGTGGTCACCGCCCCATAGTGCCCCCATGGGCCGCGGCGGATAGGGGCCATGCGCAGCCCGGCCTGGCGGCGGGGAATGCGTCGTTCACCGGGTGATCACCGACGTACACGGTTCCTCCCGCCGGAGCACCGGACGTGTCGAGGATCCGTTCGAAGAACTGCGCCGACGGTTTGGCACAGTCCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //