Array 1 122339-124683 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULZ01000003.1 Clostridium sp. OF13-4 OF13-4.Scaf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================= ================== 122339 28 100.0 33 ............................ CAACAGCCAACATATAGTTGACAGCCTCATTAG 122400 28 100.0 33 ............................ AATTTCCGTCTAAGTTTTCTCCTAACCCATCAA 122461 28 100.0 33 ............................ CTGCCTTAATAAATTCGTAAAGCATTAAATGAA G [122483] 122523 28 100.0 33 ............................ TACTGCGAATCCAAAAACACATTGCCTAATGCC G [122545] 122585 28 100.0 33 ............................ CAATGAAACATCGGCTATCTATTTTGAAATTGA 122646 28 100.0 33 ............................ CCAGAGATATTAATGGTAACTACTAATCGAACG 122707 28 100.0 33 ............................ TAAACTCATCATATAAACCGATTCGATAACCTT 122768 28 100.0 32 ............................ CTTTCCAACTTGCTAATACATCTATTTCACAA 122828 28 100.0 33 ............................ CTAACATTGCGGCAACTGATATTAGTTCGTTCA 122889 28 100.0 33 ............................ CTGTGGTAGCCGCACCTAAAGCTGTAAGTAATG 122950 28 96.4 33 .................T.......... CTCGTTCACTGTCATATATAGAATCAAGTTTTT 123011 28 100.0 33 ............................ TGGCTAGTACCGCGATAGGCTCGGCAGTCAATA 123072 28 100.0 33 ............................ TATCCAAAGTGCACGTTAGATTTATATACTCAG 123133 28 100.0 33 ............................ CGCGCGTTCCAACTGATAGAGCCAGGTTGTATA 123194 28 100.0 33 ............................ CTCGATACCGTTGTTATATCTGATATATAACGG 123255 28 100.0 32 ............................ CTATGGCGGAGACCCGCCTACCTGGAATCAGT 123315 28 100.0 33 ............................ TTTCTTCAATAACCATTGCTGTGTTAGTCAGAG 123376 28 100.0 33 ............................ TCCGTCCGCCCGCAGAGCCTGCGAGGAATGAAA 123437 28 100.0 33 ............................ TTTAATGAACCGTCTGACTTGGAGGGAGGTGCT 123498 28 100.0 32 ............................ TATGAGGCGTTTTGGGACAGATCCAAAACATC 123558 28 100.0 34 ............................ TGTATATACAATATAGTGCTGTATGGCATACACT 123620 28 100.0 33 ............................ TAAATCCCTACTATGTGGAATTAGGCATATCTA 123681 28 100.0 33 ............................ CTGTTCTGTAAATTCCTGTAAGTTATCAAATAC 123742 28 100.0 33 ............................ CAAAGACGACGAATGAATGACGGTACCGGATGG 123803 28 100.0 33 ............................ TTATCAGAAGCCGGATTTCAAAGTTTCGTCCAA 123864 28 100.0 33 ............................ TAGGCGGCGCAATCATCTGCGCAATAATGTCAT 123925 28 100.0 33 ............................ TTTGCGCGGTGGTCGGCTGATACATAACGTCAA 123986 28 100.0 32 ............................ TCGAAGCCTGTGTAGTTACTGGTAAAGAATTA 124046 28 100.0 33 ............................ TGCTGTTAAAAATCTAATAGCAGATATTAAAAC 124107 28 100.0 33 ............................ CTCGTCGCACTGGATAACCAAACTTATCCCAAA 124168 28 100.0 15 ............................ TAAACTTATCCCAAA Deletion [124211] 124211 28 100.0 33 ............................ TATGGGCGGGACGGTTGCTAGTAGAAATAGTGG 124272 28 100.0 34 ............................ CCCGCTGGCAATAACCCCCACGCATTGAGGATAG G [124294] 124335 28 100.0 33 ............................ GAATCAATTATGATGAGGAACAGAAAGCGAGAG 124396 28 100.0 33 ............................ TATAAAGTTAGCAATCAACCTGTAGCTACTATG 124457 28 100.0 33 ............................ CGGTTCGCTTGATGTTTTTTATAAAATAGTAGA 124518 28 100.0 33 ............................ CGGCTCCGGATCGAATCCACCTGGCAACCGGAT 124579 28 100.0 49 ............................ TGCGCGGGGGCGATCCCGAAAAACCGGAATGGTTGACGATGGATCAGAT 124656 28 85.7 0 ............T...........T.TT | ========== ====== ====== ====== ============================ ================================================= ================== 39 28 99.5 33 GTATTCCCCGCGCAAGCGGGGGTGATCC # Left flank : TCATCAGATGAGATTATTGAGTTGGCGGCGATTAGAATCATTAACCACAAAATTGCAGACCAATTGGAGATTCTAGTGAAAGCAGAAAAAGGTGTTCCAAAAGTAATTACTGAACTTACGGGGATTACAGAGGAGATTCTTGAGGAAAAGGGGATGGTTCTTTCTTCAGCGATAGAGAAGTTTTGTGAATTTATTGGACAAAGTACAATAGTGGGTCATAACATCGCATTTGATCGCAGCTTTTTAAAGGAAGCTTGTCGAAAGACCAATCGTATGAATCTAAAAAATCCGGCAAAAGATACATTAGATCTTGCGAGAAGACGAATCGATGATATTGATGATTATAAGCTGCATGCACTAGCAGACTATTTCCAGATAAAAGTTGAGGAGGAACATAGGGCATTAAGTGATTGCATCACAACATTTCAGGTGTTTGAGAAACTAAATGAAATTTAGAGATGGAGATCGGGAAAAGGTTGTAAATAAGGGATTTTTTTAGT # Right flank : TTCCTAAAATCTAAAGTTTGGGAAGATAAGAACAACCTTATGATTTCAACATATGAAGCCATAAGGTTGTTTTTTTCGTATAGAAAACTTCACTGCCGCATCTTGAAGGTCACCAGAATTTGTGGGAAATGATAGGTGGTTGTTTGCTCAGTTTTTTGGAATATAGATGATTTTGTCACAGGTGTAAAGCTCTTCTCCCCTCTGTTTCGCGTTTCATATCCGATATATTTACAATTCCCATCCAACTGACTATAATAAAGAATGCCCGTTTGCCTGCAAAGGCGCGGAACCATATCCATCTGCATCAGGGCGATATGACAGAAAAATGAACTTAAAAGAATGGAAGAAACAACAATGAATGTAATTGAAAAATTTGGAAATAGGGTGAGCAGCCAGGCGCTTAAGGATCCGGAAAAAGCGCGTCGGCTGCTTCTTGCGGGATACCGCCTGCAGGAAAAGAAGCTTCAGTTTTTGCCGGATCGGGGGCTGCCGTCGTCGGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCAAGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //