Array 1 101787-102870 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAWUT010000003.1 Lacrimispora celerecrescens strain MSK.15.50 NODE_3_length_233670_cov_57.5823, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 101787 30 100.0 37 .............................. GATGAATGAGAAGAACTGGCCGGAACAGGCAAAAACA 101854 30 100.0 37 .............................. AATATGCCGGTACAATTTATTATGACCGACTGATCCT 101921 30 100.0 35 .............................. TTCGGACAACCGGTGCGGATCCAACCCGCATATCC 101986 30 100.0 34 .............................. ACTGCATGTTTGGAAATACTGGTTCTTCATGGCA 102050 30 100.0 35 .............................. TGATCTGTCTCAAATATTCTGGTGTCAGCATCCGC 102115 30 100.0 36 .............................. TAGAACTTGTCAAAATCCTCCTGTGTGGCCATTCTT 102181 30 100.0 37 .............................. AAAAATCCATAGGCGCGCATTTTGGGCGGGCGTATTT 102248 30 96.7 37 .............T................ ATGGATCCATCCGGGCAATACAGCAGACTGGCAAGCT 102315 30 100.0 35 .............................. AGCCACTCCTTAGGCACGGACCTATAGTCGCTCTT 102380 30 100.0 36 .............................. TCTTATACATGTAATCGCCAAGGCTGGCATTTAAAC 102446 30 100.0 39 .............................. TTGCAATACCGGCCGTTGGATCCTGATATCCCTCAGAAT 102515 30 100.0 36 .............................. GCCTATATAGAAAAAAGCCGATCAGCGCACAACTGA 102581 30 100.0 35 .............................. ATGGGACGGGAGAGACCAAAAGAACAAAACATACA 102646 30 100.0 35 .............................. TTTGAAAGATTGGCTGCACCTGCAAGACGTTTGAA 102711 30 100.0 36 .............................. GTCTTATAATACTTAGTGATGAACGCCGTAACCAGT 102777 30 100.0 35 .............................. CTTCCTAACGCAGCAATTCCAATAATCGCACTCAT 102842 29 83.3 0 .................A.....A.-..TC | ========== ====== ====== ====== ============================== ======================================= ================== 17 30 98.8 36 GTATTAATAGAAACATAGTGGAATGTAAAG # Left flank : ATTGGCGAAAAAGAGTATGAGGGATTTCGAATATGGTGGTGAAGTATGTATATCGTATTAGTATATGATGTAAGTCAGGAAGACCATGGAACTAAGCGATGGTCAAAAATATTCAAGACATGTAAAAGATATTTAACACACATCCAAAACTCTGTATTTGAAGGGGAGATAAGCAGAGCGCAGCTGGCAAGCCTGCAGCAGGAACTGAAACAGTATATCGATCCGGAGTTGGATTCTGTTATTCTCTTCAAATCACGTCAGGAAAAATGGATGGACAAGGAATTCTGGGGCAGAAAAGATGACCTGACCAGTTTCATCTTGTGATTGTCGACCTGAGATAGAGATAAAATTACGAGAGGTCGACAAACGTGAAAAACATAAGCAAAATAGTGCTTCCGGTGAACCGTGTTATATCGAAATAAATAAAAAGATAAAAAAATACCATGGTCGACAAAATATGGTATAATATGGAAGAATTAATCGGTGGTTCAGAGGAGCGG # Right flank : CCAGCCATCGCTTCAGAATCATTTCTTTTGTATATAAAAAATACAGTTAAGCTACGAAAGAAGGATTGTGATATAATGAGTGGCAGGGATGAACCAGAATGAAAAAGGAGTATTACACGAATGAAATCAAGAACAGATGCTGTCTATGATGCGTTAAAAGAAAAAGGCTACCCGGATGATTTTTGCCGGGAGATTGCATATAAACATATGAACACAGACTATACCGCAACGCGGATGTTAGGATATCTTTATCGCATCTCGAATCCACGGCCGGAGGATGTGGTGGATGAGATGCTGGCTATCTTAAGTGACAGGAATGCCATTATTCAGAAAAAAGAACTGGAACATGCACAGGCAACAATCAACCGGATCTACAGAGAAGGGTTGTGACAGTCAGAATATGGACAAAAGAAGAACAGCAGTAAACATAGGATGCATCTGCCTCATTTTCCTGTTTATCTTTGGATTTTACAAATGTATCCAGTGGGATAATACGAGCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATAGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 88982-88423 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAWUT010000007.1 Lacrimispora celerecrescens strain MSK.15.50 NODE_7_length_117337_cov_54.7893, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 88981 32 96.9 34 T............................... CCTTATCCAACGCTACTGCACCGGATCTTGCTTC 88915 32 96.9 34 ...................T............ CACCAAGGGTCAGTGCACCACCCTTTGCGTAAGT 88849 32 96.9 34 ..................G............. GTTCCTTGTACATCGACAGATACAAGCGAATATC 88783 32 93.8 34 .....G............G............. ATTCCAGTCCCTGGTAAGCATCCTCTTCCCCGAT 88717 32 100.0 34 ................................ GTGGTCTTACATGGGAAGAATACTTTCAAAAACA 88651 32 100.0 33 ................................ GATACTTTGCCAAGTCGTTTCACAAGACCTGTT 88586 32 100.0 35 ................................ TAGAATTCGGGATCGTAAAATCTGTATACGTGTAC 88519 32 100.0 33 ................................ GCATCATAAGCGCTGGATTAACAGAGAGAACAT 88454 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 9 32 98.3 34 ATTTCAACTCACAGCCTCTCAAGGAGGCTGAC # Left flank : TATGATCCACTGACAGGCAAATCCATTCAGGATGCACCCACAGACGCCCACTGCAACGGTACTGGTAAAAAAGATCTTTTTCATGCCTTTATAATCAGAAATCGCTCCACACACCGGACCCAGCAACGCAACCACGATCGTGATCACCGCAATCGCCATCGAGTAATAAGCCGTTGCCCGATCCGACGTCAGCTGCCCCGGCTTTGTCCCTATCGCCATCGCCTTAAACCAGATTGGTATCAGCGCACACGCCAGCATCGTATACGCCGAATTCCCCACATCATAAAGCACCCAGGCGAACTCTTTGTCGTTCAGATTGCGGAATATTCTTCTCTTCTTCATACAACGTCCTCCATCCCCATATACATTTTCTGAAAATTATCTTTTTCCACGACACATTATATAATTTATTATATATGAGAATGATTAATTTCACAATCTTCTTCAAGTAAAATGCTTGTTAATTTTCTCGCAGCTACAACAATGACACCGTATTCCTC # Right flank : AGCAATTTTATTCAATAAAAATTGCTTTGTTCAACTCATTTTTATAACACTTTACCAATCTCCCCCACAACCTCTCCTCCTCCCTTCTTTTTTCACCCTATTTTCTTATTTTCAGCAAGAATATCAGGTGCGAATCTCCCGAGGATTGGGTGGGGGCTTGGGGTTCGCACTATAGGATCAGGGTGTCGGTGACATCAAAACCCTGTTTTGCACCTATGTGTTCTACTTTATTTTTGTATTTATCTCCGAGATAATAAAATCTCAGACTGTCCACTTCTTTATCAATAATTTCTTCCAGGATATGTCTTACCTGCGTGCATTTTGTTGCATCCATCTGGCACTCAAATACGGAGTTTTGTACGCGTTGTCCATAATTGGTGCATGCTTTTGCAACCTGTCGCAGGCGTTTTCTTCCTGCTGCGCTCTGTGTATTTACATCATAGGTAATCAATATCAGCATAATTTCTTCCCCTACTTCCAGAAAAATGGAGGATATTCAT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAACTCACAGCCTCTCAAGGAGGCTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //