Array 1 206071-204388 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTLR01000002.1 Veillonella sp. AF36-20BH AF36-20BH.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 206070 36 100.0 30 .................................... AAACTTAGATCAAAGATGGAATCCCATTCT 206004 36 100.0 29 .................................... TATCAGCACGTAAAGGCGGTTGGGGCCGT 205939 36 100.0 30 .................................... CCTAACAGCCGCAATCAATTACTTGATTGG 205873 36 100.0 30 .................................... ACATAACGGAGCATAGTGTCCCATGTACCA 205807 36 100.0 30 .................................... ACCATACCGGTCTAGGTATGGTCGGTACCA 205741 36 100.0 30 .................................... TTCAATCCTAACAAGATTTGATGGCAATGC 205675 36 100.0 30 .................................... CCTGCGGCAATTGCCAATGGCCTTGTAGGA 205609 36 100.0 29 .................................... TTTAGCTGGTACGTTGACGGCTACGGACT 205544 36 100.0 30 .................................... AACATCCAGAATAAAGAAGGTGTCACGATT 205478 36 100.0 30 .................................... ACATCAATAACATACATCTGTACACACACA 205412 36 100.0 30 .................................... TGTTTAATCCCTTCAGCAGTTGCTTTAGGA 205346 36 100.0 30 .................................... TTGAAACACTTCAAGCTACCTATACAGGTA 205280 36 100.0 29 .................................... ATATTTAGAACATGAGTTATATCTAGTGT 205215 36 100.0 30 .................................... ATTTGCGACTCCATTCCTTTTACTTTTGTA 205149 36 100.0 30 .................................... TATGAATAAGGAGATTAAATAATGACCACT 205083 36 100.0 30 .................................... ATTGCTGGAAAGGAAACAGCACCAGCAGGG 205017 36 100.0 30 .................................... TCTTCTAGAGATTTAGCAGATACTCGTACA 204951 36 100.0 30 .................................... TAACTTACCACCTCGCAGCGTGTCGCCGAT 204885 36 100.0 30 .................................... TTGTACCAGCAGTACTATTACCAGTTGGAA 204819 36 100.0 30 .................................... CTTTTCCATTAACAGGTTGTATCTGCTGCA 204753 36 100.0 30 .................................... GCGTAGAGTTCTGTAGTTTACTATTAGAAT 204687 36 100.0 30 .................................... ATAAATTATCTAAACTAACTCATGAATGGC 204621 36 100.0 30 .................................... GCAAATGCTTCACCCCTTGTTATGTCATAC 204555 36 100.0 30 .................................... TTAAATTCAATGACACAGAAGATCTTGCAC 204489 36 100.0 30 .................................... TTGTCTAAAAGCCTGCAAAAAAAACACCTA 204423 35 80.6 0 ......A....T...G..CG..-...........T. | T [204398] ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.3 30 GTTTTAGTACTCTGTAATTTTTCGCTATGATAAAAC # Left flank : TAGGTTGGGGGTTCGATTCCCTCTAGGCGCACCAGAAGGATAGAGCTGCAGTTTCGCCTTAATACTCGTGAGAATCTATTAAGGTAGGGCTTTATGCCGAAATCAAAGGACACAATTTATTGTGTCCTTTTCCTATTTTAATCATATTAAAACTATCTTTTTATCAAGATAATAGTTGAGTAATTATGTTTATTTAGTAAAAATTAAAACTGATTGATGAATAAAAATTAGAAAAGCTTGACATATAAGTAATGCTGATATATTATGTAATTAGATTTTACCATAGCGAAAGGTTACAGAATCTACTAAAATAAGACTTTATGTCGAAATCACTACTTTTAAGTAGTTATTAACAATAGTATATGTAAATTGAGTTAGTAGTACATATTACTAATGTTTTTTGTGTGAAATTTTGAGCACGGGTCTTATGATCTGTGCTCTTTTTGTTTATTGATTTATTATAGCGAAAGGCTACAAAAGTGCTTAACTTCGTTGTTGAG # Right flank : TAGAGTAAAAAATAATGATTTTCTGATTATTATGATTTTATGTATTAATACAATTAATGAATATCAGGGGAGGGTATATATGGGATATATACTGGGATTAGATATCGGGGTTGCTTCTGTTGGTTATGCAATTATTGATGAAAACTATAATGTTCTAATTAGTGGGGTAAGATTATTTCGAGAAAGGACGGCAGAAGAGAATGTAGCACGTAGAGGGTTCAGAAGTAGTCGTAGAGGTGTGAGGCGGAGTCATCATAGATTAGAGCGATTAAAAGAACTCTTATCAAATGTACTAGGGGTAAGTGGAGATCAATCTTATACAAATCTCTATGAAATTAGAGTTAGAGGGCTTGCTAATAAGCTTTCACCTGATGAATTGATAGCTGCTATAATTCAATTGGCTAAACATAGAGGTGTTTTCTATTTGAGCCCAGAGGATCTTGCTGCTGAGGACGGAAGTAATCGAAGTTCAGCAGACATTATTCGAAATAATGAGAATA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTTCGCTATGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //