Array 1 4911-4525 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CHWH01000050.1 Streptococcus pneumoniae strain 0267, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                                	Insertion/Deletion
==========	======	======	======	===========================	===============================================	==================
      4910	    27	 100.0	    47	...........................	AGCTAGCCGTAGGTTGCTCAAAGCATTTTTTGAGGTTGTAGATAGAA	
      4830	    27	 100.0	    16	...........................	TTTTTTGAGGTTGTAG                               	Deletion [4788]
      4836	    27	 100.0	    37	...........................	ACCGTTTTGAGGTTTGCAGATAGAACTGACGAAGTCA          	
      4772	    27	 100.0	    47	...........................	GTGGATAGAACTGATGAAGTCAGCTCAAAATATAGAACTGACGAAGT	
      4655	    27	  92.6	    40	..........T...............T	TTTGAGGTTGTGGATAGAACTGATGAAGTCAGCTCAAAAT       	
      4671	    27	 100.0	    47	...........................	CTAAGAAGCTAGCCGTAGGTTGCTCAAAGCATTTTTTGAGGTTGTAG	
      4597	    27	  88.9	    19	..GA.....................G.	ACTTTTTGAGGTTGTGCAG                            	Deletion [4552]
      4551	    27	  96.3	     0	...A.......................	|                                              	
==========	======	======	======	===========================	===============================================	==================
         8	    27	  97.2	    36	ATAGAACTGACGAAGTCAGCTCAAAAC	                                               	       

# Left flank :   CAGATCCAGAAGTTCTCATTCTCGATGAAGCAACTTCAAACGTAGATACGGTGACAGAAAGCAAGATTCAGCATGCCATGGAGGTGGTTGTAGCAGGTAGAACTAGTTTCGTCATTGCCCACCGCTTGAAAACCATTCTCAATGCGGATCAGATTATTGTCCTTAAAGATGGAGAAGTCATTGAACGTGGTAACCACCATGAACTTTTGAAGCTAGGTGGCTTTTATTCAGAACTCTATCACAATCAATTTGTCTTCGAATAAGGAAAAAGTTGTCCTACGGGGCAGCTTTTTCTTGTCCATAAAAAATATTTATCACAGCCTTTAAAAAAACATATTAGACGAAAGTCATTTTGAGTGATATGATAGGACTATCGTTATACTCAATGAAAATCAAAGAGTAAACGAAGCTAGCCGCAGGCTACTCAAAACACTGTGAAGCTAGCCGCAGGCTACTCAAAACACTGTTTTGAGGTTGTGCAGATAAAACTGACGAAGTCA
# Right flank :  ATGTTTTTGAGGTTGCAGATGAGAACTGACGAAGTCAGTAACATCTACACGGCAAGGAAAACTGATGTTGGTTTGAAGAGATTTTCGAAGAGTATTAATATTCGAAAGGAGAGACATCATGGCTAGAACGGTTGTAGGAGTTGCTGCAAATCTATGTCCCGTAGACGCAGAAGGCAAAAACATTCATTCATCTGTATCTTGTAGATTCGCAGAGAGCATTCGTCAAGTCGGTGGTCTCCCTTTAGTCATTCCTGTTGGTGATGAGTCAGTTGTACGTGATTATGTGGAAATGATTGACAAACTCATTTTGACAGGCGGTCAAAATGTTCATCCTCAGTTTTATGGAGAGAAAAAGACCATCGAGAGCGATGATTACAATCTGGTCCGTGATGAATTTGAATTGGCGCTCTTGAAAGAAGCGCTCCGTCAGAATAAACCAATTATGGCAATCTGTCGCGGTGTTCAACTTGTCAATGTTGCCTTTGGTGGAACCCTCAATC

# Questionable array : NO	 Score: 2.70
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.29, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATAGAACTGACGAAGTCAGCTCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:59.26%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.90,-4.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.41   Confidence: LOW] 

# Array family : NA
//