Array 1 31673-32625 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZGI01000023.1 Staphylococcus simulans strain SNUC 1394 contig023, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 31673 36 100.0 29 .................................... AAGAAATCAGTATGTTGGAAACATATGGA 31738 36 100.0 30 .................................... TCGATACTTTGATTACCCATGACTGATAAG 31804 36 100.0 30 .................................... GAGGTTTTTAAAAGCAAGTGAGCAAAACGC 31870 36 100.0 30 .................................... CTTTTATATCCACATCTTTACTAAAATACT 31936 36 100.0 30 .................................... TCTAATGATTCCTACACGAGTAATGGAAGT 32002 36 100.0 30 .................................... CCCAACACGTCTATAAGTTGTAACGTAAAA 32068 36 100.0 30 .................................... TTTGATGAGGTTAAGCAGTCGGCTACTGGT 32134 36 100.0 29 .................................... AAAATGAAACGTAATCACGACCGTCAAGA 32199 36 100.0 29 .................................... CTTCCTACGTGATTTACATTCTTGTTTAG 32264 36 100.0 29 .................................... TAGGGATATAAAATTAAAGTTTGTACCTA 32329 36 100.0 29 .................................... TTATTTCAATGACAGAGGGTCGATACAAC 32394 36 97.2 29 .......G............................ CAACCCTATTTTGTTTAAACGTCTGTATA 32459 36 100.0 30 .................................... TGAAGCGGAACAATACGCCGAACAGCTAGG 32525 36 100.0 30 .................................... GATAAGTACCACAACAAATCACTAGAGTTA 32591 35 88.9 0 ...........G................TT..-... | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.1 30 GTTTTAGAATTATGATCTTTTAGAATGAAGTAGAAC # Left flank : AATATTGTTTTGAAAAAGTTGCTTGGCATGTTTAAACCAGACTTTCATAATGATTTAAATGATTTAAATGCGATAGAGCAACGCAAATTATTTATAGACACATTAACATCAACAGAAAAAGAAAATGTGCTGGTTTTGTTATTTCCTGAAGCTCATTTAGGGCTTTCGGATATGAAGGCATTTAAAAAATATCTGCAGACTCTAAATATGTTTAGTATTATTGTTACGAGCCATCCTTATTTTATTATCGAGTCAGATACATTAGCGCTTATTAAAATGAATGGAGAACCGGTGAATACTCAACAAATAAGAGAAGAGTTATTGTTGTTTAAAGAAAAAGAATCAATAACTGATTTGGATAAGACAAGCAAAATGATAGCTTATCATGAATTTTGCCAACATCCATATCTTGATGATGAGTTCTTCATTCAATTTATGAACAAATATTAGTTTACTGTCATTATAAAGGTCTCTAAAACCTTGATTTCTCATTGTTTAAG # Right flank : CAAGCGGGTATAACTTAACTATTTATCGTGCTTGTTTGAATGGAAAAATCTTTATATTTGTTTTGGAAATGTCTTTGACTTTTCATCTATCTGTGTTAAACTTAGTACAGTTTAATAAAGAAATCGTAAGTCTTTAATTGAGAGTACAGAGATGCTCCGAAGGCAGATAATTTACATGTTGAAACTAGAGAAAGTAACTAAGTAAACACTTTGTTAAGAGGTAATTTTGTATGAACACGCAATTCACCAACCCTGATTGCCATACAAATTTAGTAAAGTAACCGACAAAACAGTTACTGATTTAAATAGTTGAGATAGTAAATCTCGCATGTTCTTCGTGTCCCGTGTCTCTCAATTGAGATACGGGATTTTTTTATGGAAAGGTGAGTGCGGGAATGACAGAACGTATTGTATTAGATGATGCAGGCATGCAGCGGACTTTAACACGTATCGCACATGAAATTTTAGAGTATAACAAAGGTACTGAAAATCTTGTGTTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAATTATGATCTTTTAGAATGAAGTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //