Array 1 1344-654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPEO010000488.1 Phocaeicola vulgatus strain 1001713B170221_170320_E11 NODE_1644_length_6593_cov_33.7993, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 1343 33 97.0 33 ................................T ACTACAACCGTGAATATAATCGGACTCGGATTA 1277 33 100.0 34 ................................. ACAGTGTAATGATAAGTAACGCACAGTAACGGTA 1210 33 97.0 33 ................................C ACAAGGTGCACAGAAACACATCGCATCTCATTT 1144 33 97.0 31 ................................C TTCTTGGGAAGCAGCGCGAGCAGCACGTCCT 1080 33 97.0 33 ................................G GAAAACAACTAAATCAACATCTAATTCTCCATT 1014 33 97.0 32 ................................T TTACTCTCTGTAATCTTTATTATTGACCTAGA 949 33 97.0 33 ................................G ATTATGCACCCTCGTCAAACGGGGCAAGGGATT 883 33 100.0 31 ................................. TATTCTGAACACATTGCAAATGTACAAAAAG 819 33 97.0 32 ................................T GGGAAGCTTGCGCCGGATACATTATGGACGTT 754 33 100.0 33 ................................. ATGACGAGGTGAATACGTGTATAGACAACCATA 688 33 93.9 0 ....................A.........G.. | TA [665] ========== ====== ====== ====== ================================= ================================== ================== 11 33 97.5 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : GATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAG # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAATCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGCGTTCCAGAGTAAATATATTATATTTTTTACTATACTATTCCTTGTTGTTTATTTGTTATATTGTTGATTATTAATGTATTATTGTCTGTTTGTGTCGATTGTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGGAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGAA # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //