Array 1 100801-97293 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047318.1 Streptomyces sp. HM190 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 100800 29 100.0 32 ............................. GAAACTCCGCCGCAGGCCAGGGGCCCGGAGGG 100739 29 100.0 32 ............................. GCTCGCATCCTCGGTCAGAGCAGGATGGCCAG 100678 29 100.0 32 ............................. ACAGCTCAGGTTTGACAGTGATGCACGTTAGC 100617 29 100.0 32 ............................. ACCTACCGGGACAAGCAGGTCGACGAGCCACC 100556 29 100.0 32 ............................. CTCTACCCCTGGTGGACCGGCCCCCGCGAGAT 100495 29 100.0 32 ............................. TCCTCACCCAGCTCAGCGAAGACACCCCGCTC 100434 29 100.0 32 ............................. GACACCGGGCCCTCGGGAGTGCTCCCACCCCG 100373 29 100.0 32 ............................. CAGGTCGCGCGCGGTGACCGGTACCGCCGCTT 100312 29 96.6 32 ............................A TAGGTCGTCATGTGGGCGCGCAACCCCAGCTC 100251 29 100.0 32 ............................. GGGTCATCGAGGCGCACGCCCAGCAGGGCCTC 100190 29 100.0 32 ............................. GTGCAGATCGGGTTCGACCCGACCGGCGATCC 100129 29 100.0 32 ............................. GGCGCCATGGAAGACGTACGACTCAAGCACCC 100068 29 100.0 32 ............................. CCGCAGATACCCGCATACCCGCATAACCGCAG 100007 29 100.0 32 ............................. GGCCCGGACTGCACGAGGCACTCTCACTCGTC 99946 29 100.0 32 ............................. GCGTCATCCCCGAGCGCCCGCAGCGTGTTCGC 99885 29 100.0 32 ............................. GACCCCGGAGCCCTTCAGGCGAATCACGCGGT 99824 29 100.0 32 ............................. AGCCCTCCGGGCCGCATGCCTGCCTCCTCAGA 99763 29 100.0 32 ............................. CGGGCGAACTGAGCCTCCGCGATACCCAGGGC 99702 29 100.0 32 ............................. GGTGCGGTGAGCTGGTCGAGGTGGGCGCGCCA 99641 29 100.0 32 ............................. TTGAAGGCGACGGCATCTGCGCAGCGGTAGGC 99580 29 100.0 32 ............................. AGGCTACCCAGCCCACGACGTCCACCGCACCA 99519 29 100.0 32 ............................. ATGCTCGCCCGCCTCATGGCCGGCATCGCCCA 99458 29 100.0 32 ............................. CGCCACGCCACTTCGGCGAGATGCCGGATGCG 99397 29 100.0 32 ............................. GTGCCGCAGAACCCGAACCCGCTCTGCCGGGA 99336 29 100.0 32 ............................. TCGTGCGCGTGCCAGCCCTTCTCCGTCGCGTC 99275 29 100.0 32 ............................. CGACATGCTGCCCCAGCGCATTGCCCAGATCC 99214 29 100.0 32 ............................. AAGATCGAGGAGCTGAAGGAACAGCTCAAGCA 99153 29 100.0 32 ............................. AGCTTAAGGCGGCAGCCTTCAAGGTTGCCGAT 99092 29 96.6 32 ....C........................ GAGCTGCGGCCCGTCGCTCAGCGCAGGGTCGA 99031 29 100.0 32 ............................. AGGTCCTCGCCTGCCTTGCGGCGGAGGTGGGC 98970 29 100.0 32 ............................. GACTACTGGACCAGCTACGACAAGGCCACCGC 98909 29 100.0 32 ............................. TGGGTCACCCGGCGGCCCTTCAGCAGCTTGTA 98848 29 100.0 32 ............................. CGGATACCCCGCACACCAACCCCGGAAGGAAC 98787 29 100.0 32 ............................. TGCACCGACAACCGTGGCCTGCCCGGCGTCCG 98726 29 100.0 32 ............................. CGAGCCCGCCAGGGTTCTTCGGTCACAACGGT 98665 29 100.0 32 ............................. ACCCAGCCCATGACCTTCGGCAGGCGGGCGCT 98604 29 100.0 32 ............................. CCGTTCCGACAGGTCTCCACGATCAAGACCGT 98543 29 100.0 32 ............................. GCTCCCCAGCCGTGCCCGCGCCGGTACACCCG 98482 29 100.0 32 ............................. CAGTCGATGGTGACGGCCCGCTCCAGCGACCC 98421 29 100.0 32 ............................. CGATGAGCGTGGACGCCGCCTGTGAGCTGGTC 98360 29 100.0 32 ............................. GGCAGCGTCTGGAACAACTCGGGGCCGAGGCG 98299 29 100.0 32 ............................. CCGCCCAAGCACGTCGGCGGGAACGCGGAGGA 98238 29 100.0 32 ............................. GCGGTGGCGGCGGCTTTGCCGGCGGTGGTGGC 98177 29 100.0 32 ............................. TAGACCCGGAAGTCCGGTACTCCCGGAGTCTG 98116 29 96.6 32 ..............T.............. TCTGCCCCGAGGCCAGCGCAGCTGGCACAGCG 98055 29 100.0 32 ............................. AAGGTTGAGCTATCGGGAGAGTACGAGGAAAA 97994 29 100.0 32 ............................. TTGAAGTCGTGCGTCACCGTGGTGACGTAGCC 97933 29 100.0 32 ............................. CGGATTCTGACCAAGGGCCGCTCGAAGGGTGC 97872 29 100.0 32 ............................. GGTCGTTGCGGATCGTCTTCTCGAACGTCAGC 97811 29 100.0 32 ............................. AAGGACTCCGGGGAGGTGAGCAGCTGATGGCC 97750 29 100.0 32 ............................. TTCTCCTGGGCCATGGCGGCGTCGTACACGTC 97689 29 100.0 32 ............................. CCACCCCGGCTGCGGCTGCGGGTACTGCTGGC 97628 29 93.1 32 ..........G...G.............. GAATCTGGAGGAAGACGATGATGACCGAGACT 97567 29 100.0 32 ............................. ACGCGGTTCTGGACGTCCTGCTGAAGCTTCCG 97506 29 100.0 32 ............................. CAGTTCCAGCTAACGAACGTCGGCAACGAGCT 97445 29 89.7 33 .C......T.....T.............. TCCGCGAATCCCGCCCCCGGCTACGACCAAGCC 97383 29 93.1 32 ............T.T.............. AGGCCGACCGAGTCGTCGTGGCCGTAGGGAAG 97322 29 79.3 0 .........A...........TC..GG.G | C [97303] ========== ====== ====== ====== ============================= ================================= ================== 58 29 99.1 32 GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : ACCAGGTCGCCTCCGGCCGCAACTACGCCGACCCCGGCAGCGAGGAAGCGGTGCTCTGGTGACCGTCATCGTCCTGACCAACTGCCCGCCCGGCCTCCGGGGATTCCTCACCCGCTGGCTCCTGGAGATCTCGGCGGGCGTCTTCATCGGCAACCCGTCAGCTCGTATCCGCAATGCCCTCTGGGACGAAGTCCGGCAATACGCAGGACAAGGCCGCGCTCTACTCGCCCACACCACCAACAACGAACAAGGCTTCACCTTCCTCACCCACGACCACGCCTGGCATCCAGTCGACCACGAGGGCCTGACCCTCATCCGCCGCCCCAACCCGAACGCCAGGACCACCCACACCATCCCCAAACAGGGCTGGAGCAAGGCCGCCCAACGCCGCCGATTCAAGAGAGACTGAAGAAGGAATGACGGTTAAGAGACAAAAGTCGGAATCTGTGAAAGTGCTGAAAAACGTGGGCCGCCGAGCCTAAACGAGCAGGTCACGAAGT # Right flank : TCTTGGCTGTCGGTTGTGGTGCCTTAGGGGCTGCGGGGCGGGTGTGGCTGTGGGCCCGCCCACCGGCTGTGTTCTGGTTGTCTTCCCCTGGCGCAGTCAGTGCTGGGTTTCCTCGGTCACCGCCCAGTGGACTCCGAGTTCGGCGAGCGCCTGGAGCCGTTCCGCGCTCAGCTTGGCGCGTCTGGTCTTGCTGTTGGACAGAAACACCCCCAGGCGGACTTCACTCCCGTCGGGCAGGACTTCGGTGTGGGAGCGGCTGATGGGCCCTACAGAGCCGGTGCGGGCCTTGTACTGCGCCAGGGCCGCGATGCCCCGCTCGAACGCCCCAGAGGCCGCCCTGGGCGCCCTGGCGGGGTGGTTGGTATCGCGGCCGGCCGCGGGCCCTGATCCGCAGCTGAGACACCACGGGCCCCAGGGGAATCAGCCGTGACATCCCCGGGGCCCGGTCGCACCGTCCAACGACGCCGCGACCCGGTTCGTCCCGCGGGTGCTGGCTGTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 110501-110895 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047318.1 Streptomyces sp. HM190 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 110501 29 100.0 32 ............................. CGCCCTTGTCGCTCGCTTTTTTGCGCGGGCCG 110562 29 96.6 32 .C........................... GCCTGCTCCTGCCCGTGCTCCTGGTCGTGCTT 110623 29 96.6 32 .C........................... CAGGCGAGTCCCCATTGGCGGGGGCGTCCCGG 110684 29 100.0 32 ............................. GCCGGCCCCACCGGCGCCGTCCCCGACCCCGA 110745 29 100.0 32 ............................. CACCCATGGGGCGAGTACTACGAGATCAAGCG 110806 29 96.6 32 ..........................T.. TCGGCGGCCCCGACGGGACCGGAGGAGCCGCC 110867 29 75.9 0 .............A......TC..CC.TG | ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.1 32 GTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TCCCGATGTCATGCACCCCCGCCAGCCACACCGCCAGACGCCGCCCATCGGCCTCACCGTCCGGCAACACCCCCGAGACCAGCGCCCGCACGTTCGCAGGCAGCCACCGGTCCCACAACAAACCCGCTACCGCAGCACTGTCCTCCATATGCCGCCACAACGGCAGCCAACCCCCACCATCGCGGTCATGCTTCGCCCACACCGACCGCACCGGACCCGCAAGCCGACCCCCCAGCCCAGACCCGCACTCCCCGTCACACGCCATGCCAGATACATACAGCCAGACAATCTCCCGCAACGCCTCGTTCAAGAAACCGAACACGACCGCGGGCAAATCTGCCCGGGCGCCACGTAACGCCAGGCCAGCCGACGTAGGATGACCGGCCACCTCCCCACGACCCAACCGGTAGGCATTTACAACACTTTGAGCGGAATAACCGAATCAGTGAAAGTACCCTCGAACTATCTCCCGCAGCGATAAAGCCACAGGTCACCGAGCG # Right flank : GGATCGCTGCCGCGCTCTTCCTCACCGTCTGCCCGGTCGGCTTGATCCTGCCCACCACCACGGCCTTGTGCCTGCAGCGTGCGCCACACGCGGCGGGCAGCGCCTCCGCGCTGCTGGGTACCACCCAGTTCCTGATGGGGGCCCTCGCGCCCGCCCTGGCCGGTCTCGACGGCGAGTCCACCGCCCTGCCCATGGCCTGGTCGGTCCTCAGCCTCGCAATGGCCGCGGCGGGCTGCTTCCTCGCCCTGTGCCGCCCCTGGCGATCCACCCCCGACCCGCTGGATCACTGAGCCGACGCACGAGGACACGAGACCGCATCCGTCAGGCCGATCGAACACCACAGGAAGGAACCTTCTCCAGGCATTCAGCACCTGCGGCGCCGGACATCCGCACCGGAGAAGGAGCAGGCCCCTCGCGGTGTGGCAGGCGGCCTGCTCACAGGCGGAACTCCCCTCACCGGGCGGCACTGAGCTGCGGCCACCGGGTGACCGCCGCTCCGC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : GCGCTCCCCGCACCCGCGGGGATGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //