Array 1 205925-207293 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUDD01000002.1 Acidipropionibacterium jensenii DSM 20535 H590DRAFT_scaffold00002.2_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 205925 28 100.0 33 ............................ CATGGATCGTCGACGAAGACACCGGAGATCGGG 205986 28 100.0 33 ............................ TCGGCTTATCGGCGAGCTTCGCCAAATCAGGGG 206047 28 100.0 33 ............................ CGACGGTGGAGATCCCCCGCAACATTCAGGTGC 206108 28 100.0 33 ............................ CATGTCGGCTGCCTTGGATCCGTCACTGTCGGT 206169 28 100.0 33 ............................ CATCACGGCACCGAAGGTCTGGAAGATGGCCCG 206230 28 100.0 33 ............................ CGCGCAGGCGATGGTCCCCACCCCTGGCATGTC 206291 28 100.0 33 ............................ CTCCCATGACTGCGGCAGAATCAGCAGCAGCCG 206352 28 100.0 33 ............................ CGCGCAGGCGATGGTCCCCACCCCTGGCATGTC 206413 28 100.0 33 ............................ CTCCCATGACTGCGGCAGAATCAGCAGCAGCCG 206474 28 100.0 33 ............................ CAAGTTCAAGTCGCTGGGGAATGTTGTTTCCAA 206535 28 100.0 33 ............................ CATCGAATCCGAACGTGGTCGGGAAGTCGAGGA 206596 28 100.0 33 ............................ CTTGTCGGAGGGCTTCGAGAAGCAGCTCTCAGC 206657 28 100.0 33 ............................ CGGTGCCCTGACGGTGAGTGGTGTGGCTCTGGG 206718 28 100.0 33 ............................ CTCAGTCACGGTCTCCGGCATCATCATATCGTG 206779 28 100.0 33 ............................ CGGTTCTTGCCCGAGTTCGATTCTCGGGAGCGC 206840 28 100.0 32 ............................ CCCACCACCGCCCCCCGGTCAGGCCGCCGGCC 206900 28 100.0 33 ............................ CCGGGACATGACCGGCATCATCCAGGCCATCGA 206961 28 100.0 33 ............................ CTTGGGGCTCGCGAACGGGTAGCGGTGGTGGCC 207022 28 100.0 33 ............................ GGCCCCCTCCGCCTACTCAGCCGCGGCGATCAA 207083 28 100.0 33 ............................ CGGCATACGTCCGGGTTCGAGTCTCGGAAGCGC 207144 28 100.0 33 ............................ CTCGGCGCGAGCGTTCTTGGCGTTCTCGCGTTC 207205 28 100.0 33 ............................ GCCCCACATGCGCTGCTCCGACACCTCGGACGC 207266 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 23 28 100.0 33 GTGTTCCCCGCGAATGCGGGGATGAGCC # Left flank : GGGGCGGGACGGCGGTGATCGGCGACCGGAGCAGGGAGACGAAGAGCAGGAAGGCGATGGTGGGCAGGGCCGCCTGCCAGGCAGCGTGGCGGAGCTGCGGATCAGGCGCCGGCTGGGTGGTGTGGTCCCCGCGGCGACCGCGAGCATCCGTGTGAGACATAAGTGATCGCAGTCTATCGACGGCCGTGAGCAGCAGCTCCAGCGGGCTGCACGGGGGGGTAGCTAAACATGCGTCCGCATGTAACGACTCCGCCGTTGATGATCGACCAGGCGTTCGACCCGAGACGAGCTCATGATCAGCTTAGCCAAGCTGACGACGCTCGCCACGGGTGCGTCCGAAGAGTTCTGGATGTTGACACACCCGGCGCCCCACACAGCTCGTGTGCACGACACAGCGGGCCGACAGCGCCGAGGATCTCACACTTCCCACCACAGCCTCGACCGAACTGGAGTACCCTCCTATCTAGTTGTTGGCTCGGCATCTGACCTTGTCAGATGGG # Right flank : GT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAATGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAATGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5-154 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUDD01000029.1 Acidipropionibacterium jensenii DSM 20535 H590DRAFT_scaffold00028.28_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5 28 100.0 33 ............................ CATCACGGGCTCGACGGGCACCGACGAGGAGAT 66 28 100.0 33 ............................ TCATGAGCAGCACAGACATTGAGAGACACCACG 127 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 34 GTGTTCCCCGCGAATGCGGGGATGAGCC # Left flank : CAGCG # Right flank : CACGTTAGCCTCGGTCCTCTTTGCTGGACGTGTCGATACAGTCGCTTGCACTGCGTTCAGCTTCTACGGCTCCCAGAGCCCTACCGGCAGTTTGACTTGAGTGCCGCCTTCCGAATTGACGCCCGCGACCGCCGGACAGTACGGTGATGGTCCTTGGGAAGGAGCATCGATGCTCGACTCGTGGTCAGCTGCGACCAGGTCCTGTTGGGGTAAGACAAATCCCGACACTGGTGGTTGGCTACCACTTGTTCAGCACCTTGAGGATGCTTCTGGCGTCGTGCGTGAACTCTGGGCGAAGCAACCTGGCAGCATCCAGTCAGTCTTCGTCGAGGCTCTCGGTAGCGAAGACAGCACGGTGGCGTTCCTCACATTCTGCGCTGGGGTTCATGACATCGGAAAAGCTTCCACACACTTCGCTTTTAAAGCAGAGATGGTGGGCATGGGCTATCTGTGCGGTCAGATGGCGGACCAAGGCCTCGTCGGTCCGGCACGGATTGCCC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAATGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAATGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //