Array 1 9-620 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNHO01000039.1 Thermosediminibacter litoriperuensis strain DSM 16647 Ga0056050_scaffold00039.39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================ ================== 9 30 100.0 36 .............................. TATTCTCGGGATAGTCTGCAAATCTATGTTCGCGAC 75 30 100.0 36 .............................. TCGTCGACGACTGGAATCGGGATGCTTTCTTTAAGG 141 30 100.0 39 .............................. TGATGCTGGCTAACCTAGCTGTGGAGGACCGGCTATACC 210 30 100.0 80 .............................. AACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCGGGA 320 30 100.0 37 .............................. TGGAGAACGGAAATTGATAAGAGGAATATCTTTTGTA 387 30 100.0 38 .............................. AAAAACGATATTGAATATATCATTTTGGTAATATTCCG 455 30 100.0 38 .............................. ACGACGCAAGTTCCGTATATCCCAAGGTATGCCAAAGC 523 30 100.0 38 .............................. TTTTGAATTTCCTTGATAACATTGATGAGATTCATCCT 591 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================================================================ ================== 9 30 100.0 43 GTTACTAGCTTACCTATGAGGGATTGAAAC # Left flank : CGGTCCAGG # Right flank : CATGGAGACGGCAAAGAAAGAGATCAGGCTGGCGGAGGTTACTAGCTTACCTATCCTGAAAATAATGTTCCGCAAAAAGGCAATGAAAAACTAAGCCCATACATAATGTAAAAATATGGGATAAATATGAAGCTTAATATACGTAATAACAAATGTCTGTAAGGTTAAGATACCATCGTTTCGACCGAGACCTTTAACCCTAAAGATTCAAGCTTTTTCAAAGACTGGCGGATGACCATGTCGCGCCTTTTTTCTTCGTAAAAATTCGGACCCAATTCAATATAAGGTTGCTTACGCTTGAGAATATGATAAACTATAGTTAGGATGCTGTGAGCCACCGCAACAGCTGCCCGGTTCGATCCTCTTCGGGCAGCGATGCGGTGGTATTGACTTGCGAGAAAAGTATCTTTTACTCTGGAGGCGGCCCGGGCAGCTTCTACAAGTGCACTTCGCAACTTCTTGTTTCCCTTTCGAGTCCTGGCGGACTTTCGTTTACCGGC # Questionable array : NO Score: 8.80 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTAGCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 1 5338-5499 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNHO01000010.1 Thermosediminibacter litoriperuensis strain DSM 16647 Ga0056050_scaffold00010.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 5338 30 100.0 36 .............................. CAGCGCCGCCAGAGCAGCTCTTTTAGAAGCATGGAA 5404 30 100.0 36 .............................. CCGTATTTTTTGCTTGTATAGCCGCTGCTTCCCAGT 5470 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 GTTTCTAGCCTACCTATAAGGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTC # Right flank : CTTGGGTTTGACCATAGATGAAATTTTTTTAACAAAAGTTTCTAGCCTACCTATCCTGAAAATAATGTTCCGCAAAAAGGCAATAAAAAACTAAGCCCATACATAATGTAAAAATATGGGATAAATATGAAGCTTAATATACGTAATAACAAATGTCTGTAAGGTTTAGATACCATCGTTTCGACCGAGACCTTTAACCCTAAAGATTCAAGCTTTTTCAAAGACTGGCGGATGACCATGTCGCGCCTTTTTTCTTCGTAAAAATTCGGACCCAATTCAATATAAGGTTGCTTACGCTTGAGAATATGATAAACTATAGTTAGGATGCTGTGAGCCACCGCAACAGCTGCCCGGTTCGATCCTCTTCGGGCAGCGATGCGGTGGTATTGACTTGCGAGAAAAGTATCTTTTACTCTGGAGGCGGCCCGGGCAGCTTCTACAAGTGCACTTCGCAACTTCTCGTTTCCCTTTCGAGTCCTGGCGGACTTTTGTTTACCGGC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTAGCCTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.06%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //