Array 1 11742-12310 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALIQ01000215.1 Chelatococcus sp. GW1 contig000215, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 11742 33 100.0 34 ................................. GCGAGATCGTCGCGATTCGCCCCTTCGTGGAGCC 11809 33 100.0 35 ................................. CTGATCCGCTCGGCCCGCCCGGCGGCGATCGCCGC 11877 33 100.0 33 ................................. CTGCATCCGGCCGACGATGCGGTGCGCGTCAAT 11943 33 100.0 34 ................................. GATGAAGATCACCCGGTAATCGCCAACCCGCAAG 12010 32 97.0 34 ...................-............. ACCATCAGCTCCGCGACGCCCTGTCGGGCCGCGT 12076 33 100.0 35 ................................. GTGCGCGGGCGGATGGACGTGGCCACCGGCGCGGC 12144 33 100.0 35 ................................. CAGTACTTCGCCGCCATGAGCGAGCAGTGCCGGGA 12212 32 93.9 35 ..............-...A.............. GCCATGTCCTCACGGATGGCGTCGATCACGTCAGC 12279 32 87.9 0 ..............-...A.T...C........ | ========== ====== ====== ====== ================================= =================================== ================== 9 33 97.6 34 GTCGCTCCCCGTACGGGGGGCGCGGGTTGAAAC # Left flank : ACCTATGACGTGAACACGTCGGATCAAGGCGGGGCAGGGCGGCTTCGGCGCGTGGCGCGCGCCTGCCGCGATTTCGGCCAGCGGGTGCAATATTCCGTCTTCGAGATCAACGTCGATCCGGCGCAGTGGACGCTGCTGAAAGCGCGCCTCGAAAAACTCATCGCGCCCGAGCGCGACAGCCTGCGCTATTATTACCTCGGCGCCAACTGGCAGCGACGCGTCGAACACGTCGGGGCCAAGCCGGCGACAGACCTCGAAGGCCCCCTGATCGTCTAGCCGGGAGCCGGTTTCTGCCGCGAGGCGCAGCCGCCGCGCAGGCAGGGTGCGAACCGCAAGCGTGCCGGCGATCCCCGTCCGGTTCGCACATTGGACAATTCTTTGACATTGTTGATCTCTTTCTGCCTGCGGCGCGGGCGTGCCGGCCGCCCCGCCGGCGGCGGGCCGCGTTTCGTGGTCTGCGCCCGTTTTGCTCGTTGTCGCAATCAGATAAGAACGATGGG # Right flank : CATGTAAGGCATGTACCAGTCTTACTGCTCGCCGCTGTGCCGCCCCGCGGGGGGCGATCGTGGCCGGACGCCCTGGCGCGCTTCGGAGCGGACATTATGGAAGTGCGCGTCAAGGCCCTTCCCGGCGAGGCGTCCGGTGGCGGCGGGGCGGGGGATCTCTCGGCTGTGCGTCTCAAGCAGAGCCGCTGCTCAGGACGATATGTGAAAAATTTTAACTAAAACTGTGCTGGATCGAAGACGTTTCGAAGCGATTTCTTTAGATTTTAATTGATTCGTTACCCGGGATGAGTAGAGTGCCCCTGCTTTTTCACTGGGGGGTACTGATGCGTGCATTTCGCACTTCGATTTCCATTCTGGCTCTCGCCGTCGCCGGCCCGGTCCTTGCGGCCGACCTGCCGTCGCGGCAGATGGCCCCGATCGTGCCCGTCGGGCCGATCTTCACCTGGACCGGCTTCTATGCCGGTGTGAACGCCGGCGGCGCGTGGGAGCATGGCTCTCTT # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTACGGGGGGCGCGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 16348-14890 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALIQ01000236.1 Chelatococcus sp. GW1 contig000236, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 16347 33 100.0 37 ................................. ATGGAGTGGACGGGCGAGAACGCCACGCGTCGCGCAG 16277 33 100.0 36 ................................. ATCCGGCAGATCGTCGAAGCCACCAGCAAGCACCGC 16208 33 100.0 34 ................................. AGGCTGACGTTATTGCGGCCGTCGAGGAACTGCA 16141 33 100.0 35 ................................. TCGGCACTGGCCCCGATGATCAGGCCGACCGCGAG 16073 33 100.0 38 ................................. CCCACGTCCTCTGCACCGGGCCTGTTCGCGGAGAGCGG 16002 33 100.0 36 ................................. GCCTACACGACGCCTGAGGGTGTCGAGGGTGTGATG 15933 33 100.0 35 ................................. GACAGCCAATCTTACTGTGCCCACGCGCATCGGGG 15865 33 100.0 34 ................................. TCAAGCAGGGCACCCTCGTCGGCGGCTTCCTGAG 15798 33 100.0 34 ................................. AGGATGAAGTCACGGAAGCCTCGCTTGAGGTCGT 15731 33 100.0 35 ................................. TGGCCCGACGGGCTGAACCCCGACGAGCACATGAG 15663 33 100.0 33 ................................. TATTATCCCCGCATAAATTCATGATCCGGTCGC 15597 33 100.0 34 ................................. CTCGCCCGCTATCGCGAGATCCGATCCAGGTTCG 15530 33 100.0 35 ................................. CTTCCCGACGAGGCCGAGGCGCCCGGCACCCCCTG 15462 33 100.0 33 ................................. TGCAACGTCGCCTGCAACGTCATCGACGATCTG 15396 33 100.0 34 ................................. CGCATCGAGGCGGCGAAGAAGGGTGCCGGATCAC 15329 33 100.0 35 ................................. GCCAGCATCGTGGCGTTGAGGGCGGCCCACACCGG 15261 33 100.0 38 ................................. GAATGCCTGCATGGCGTCCTGATTGAAGATCATGTTCA 15190 33 100.0 35 ................................. GAATAGGGGCTGACACATGGCACTTGGCAGACGTG 15122 33 100.0 35 ................................. CCTGTCGTGGCCGCAGCGGCGGTCGCTGGCGTCCG 15054 32 97.0 34 ...................-............. AGCGCCTCGAAGACGAGCATGTCCGGCTGTGCCG 14988 32 93.9 34 ...................-.....A....... CTGATGGACGAATACGTGAAGGTCGACCGTGCCC 14922 32 78.8 0 ...T.............A.-..C..A.C....T | T [14910] ========== ====== ====== ====== ================================= ====================================== ================== 22 33 98.6 35 GTCGCTCCCCATGCGGGGGGCGTGGGTTGAAAC # Left flank : GAGAACGCAACGGACAGGACGGCAGGGCGCCGCTGCGGATCGTTTACAGGAGCACGGGGCGAGGACCGTGCCGAGCCTGTGCGACGGTGGCGGCGCACAGCAATAGGCTCGATGTCCATCGGCGAGATGCGATGCGGCTCCGACTCGGCCGGCCGTTGAAAAGCGCCCCGACGACGCAAGCGCCTCCGGAGCATGGCTATCTGCGCCAGCATCATCGCAGCCTGCCGGCCGCGGAGAGCGACCAGAGCGAGGTCAGCGAAGGCTCCGGCCCTCCAGCCCGGGACCTGCGCTCGGGGCCCAAGGCACAGTCAACCCACCGAGGCGCGAACCGCAAGCGTGCCGGAAAAGCCCGCCCTGTTCGCACACGGCCCAGCTCCTTGATATCGTTTGGCTAATCGCCGCCGCCCGCGACGATCCTCCGCCGGCGCGCCGGCGGAAGAGCCCGCTTCGCGATCCGAACCCCGTTTTGCTCGTTGCCGCAATCAGGTAAGAGCAAGGGC # Right flank : TTGGGCCGGTCTGCGGAGCATCCGCAGGCCGGCTGCACTCCCGCGTGGGCGTATGCCGTCATCCAGACGAGGAGCTTGGACAGGCGGCTCGGGGTCGTCCCGAACTTGCCAGCTTCATGAAAAACGGGCTTCGATGCCGGAACGTCGCTTCAAAGCCTGCTTTGATGTGGCGCGCCGCTATGCAAGCCGGCTTTCATAGCGAGGATCGGGCGCCCGGAGCGGGAAGGGAGCGCCGCTGTGCCGGCATCCGTGCCGACGAGTGGTGCCTCGTCTTCCCTGTTCGTTCGCGACCTGCGCGAGCGAACGGGCTCCGCAGGCGGACATCAAAGCGTTGATTTTCTTGGATTTCCGCGGAGACGAGGGGATTCGAACCCCTGATACGTGTTACCACGTATAACGGTTTAGCAAACCGCCGCCTTCAGCCACTCGGCCACGTCTCCTGCGGCGGCCAAGCCCTAACCTTTTCGCGGATTCCGGTCAACATGCCAGTTGGGTCATGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATGCGGGGGGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //