Array 1 269118-271281 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJEV010000002.1 Pseudoalteromonas sp. SG44-17 NODE_2_length_335314_cov_9.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 269118 29 100.0 32 ............................. CTATAATACTTTGTATGCTGCAGCTTTAAATA 269179 29 100.0 32 ............................. CGGTATGTATCGAGTAAACGAAACTGGTGTTC 269240 29 100.0 32 ............................. TATGCAGAAAGGCACTAATATACAACGAAACG 269301 29 100.0 32 ............................. CGCAGCTTGGCGGGGATGGGCAGCGCCCATGA 269362 29 100.0 32 ............................. ACCGTAAAAATCACGCCACACAAATAACAACG 269423 29 100.0 32 ............................. CCGTGGGTTAATCGCGCAGACTCACTTGATGA 269484 29 100.0 32 ............................. GCACTGGCAAAATCCAGTGTCGGGATTAGTAC 269545 29 100.0 32 ............................. CCAGTATTGTGACTGGGGATTAAATGTAACAC 269606 29 100.0 32 ............................. CTAACATCAAAATACACAGTTGAATTATCACG 269667 29 100.0 32 ............................. CTCAATCATTCTATACGTCCTAAATTCCAATT 269728 29 100.0 33 ............................. CAAACGGGTTTAAAAGGCAATAAAAAACCCCGC 269790 29 100.0 32 ............................. CAAGATATAGCCGGATGTCTACCTATTGACGA 269851 29 100.0 32 ............................. CGGTTGTACGACACATAATACCTACTATTACA 269912 29 100.0 32 ............................. CAGAGGTATATTAACGCCGGTGGTCAAACAAC 269973 29 96.6 32 .........A................... TCATTGAGTACGACAAGAACAACCAAGTTCAT 270034 29 100.0 32 ............................. TATCAGCCAAACCAAAAAGACACAGCCTTTGA 270095 29 100.0 32 ............................. TTAAAAGGTAAAGCGGCTGCTTTCTTTTCTGG 270156 29 100.0 32 ............................. CTTTCAGCATGTTGCTTGCTGCCGTTGATATA 270217 29 100.0 32 ............................. CTTGAGCCTAAAATCGGTGTAGGTATTGCGTA 270278 29 100.0 32 ............................. CAGTTTTCGATAGCCATTTTGATAAATAATTT 270339 29 100.0 32 ............................. GGCTTGGAAACTTAATGCATCCGGGCTTTGCA 270400 29 100.0 32 ............................. CGTAATACTTAGTATGGAATTTTTTAAATGGA 270461 29 100.0 32 ............................. AAGGTCATATATTCGCAGCTTTCACTAAAACG 270522 29 100.0 32 ............................. CAAATTGAAAAGAATGCAGGGGATAATCTGAT 270583 29 100.0 32 ............................. CTTGCGTAGCCACCATTTATCACAGCTCATAC 270644 29 100.0 32 ............................. AGGGTATACATCAATGACTAGACTAATAACAA 270705 29 100.0 32 ............................. CAAGTGCGCTTTAGTAGCAAAATTGAAGCGGT 270766 29 89.7 32 ...C........TC............... ACGAAATTATAGAGCCGATCCGCTATGCAGCA 270827 29 96.6 32 .............C............... GCCGTGTACTTCATTGGTGTTGGTGTTGTCAT 270888 29 96.6 32 .............C............... CAATCAATAATATCGACATACAATATTGCATT 270949 29 96.6 32 .............C............... GCAAAGTGACCGCCTTTAACTTGAGCGCATAA 271010 29 93.1 32 ............TC............... TAATACTCTGTACACAAATTGACGAGTTTAAT 271071 29 96.6 32 .............C............... TTATTTGTTTTTTGTGTCTTAATAAATTAGCT 271132 29 96.6 32 .............C............... TACAGAAAAGAGCCAGTATTACACCTTGTTTT 271193 29 96.6 32 .............C............... AAGAATTTAACATAGCGCAGCTTGAGCAAAAC 271254 28 89.7 0 .................-........TT. | ========== ====== ====== ====== ============================= ================================= ================== 36 29 98.6 32 GTGTTCCCCGTACTCACGGGGCTGAACCG # Left flank : ATTAAGCGCTGGTGAGATCACGCCACCTAAACCATATGAAGATGCCCAACCGCCAGCACTACCAGAGCCTGAATCTATTGGCGATGACGGGCATCGCACTAATTAGGAGTGGATCATGAGTATGTGTGTTGTTGTAACTGAAGCTGTACCACCCAGATTAAGAGGGCGATTAGCTGTATGGTTACTAGAAATTCGCGCAGGTGTATACGTTGGTGATGTAGGTCGAAAGATTAGAGAAATGATTTGGTTTCAAGTCTCTGAGTTGGCAGAACAAGGAAATGTGGTTATGGCGTGGGCTACAAATACTGAATCGGGTTTTGATTTTATTACTTATGGTAAAAATGCACGGATGCCTATAGATTTAGAAGGATTAAGGCTGGTCAAGTTTACACCAGTAAACAACGAAACATTAAGCTAAAAATAACTGTTACGCTCTTTAAAAATTTGGTAGATTTGAACTAGCTGTTTTTATTTATAAAAAACAAGCATATACTATTAGA # Right flank : GGTGAATTTAACTGGCTAATATTTCACTTGCTGAAGTGATCATTTTGCATTGCGGGTGACATTTCGCGCTAAAGCACGGCCTACAGTACAGTACAGGACATTTGGAGTATTGTTGAATTTATAAAGGGAGGGGTTAAGCAACATGTAATACTTTGATTTGTCGCGAGGTAAACTCGCTGCTACGAATACATGGCTCTAATGCTCTTCATCAAAGATTTGAATTTGATTGCGGCCTGATTTTTTTGCTACGTAGAGTGCGCTGTCGGCGGCGAGGATCATCATATCTGCGGTGGTATGTTTATCTGGTTTACAGCTGTAACATCCGATGCTGAGGGTGAGGTGGTCGGCGATGTTTGAATTTGGGTGCAGGATATTTAGTTGACTGATTTGCTGTTGCAGTAATTTGGCAAATTTTAAACAGTGGGTTTTATCAATGCTGGGTAACACAATTGCAAATTCTTCTCCGCCGTAGCGGGCTGCTAAATCACCTTGTCGCTTAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACTCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACGCACGGGGCTAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //