Array 1 6894823-6898575 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066774.1 Streptomyces murinus strain Am1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6894823 29 100.0 32 ............................. CAGTGCCATTTGGGGAGCTGACGCACCACCGA 6894884 29 100.0 32 ............................. CAGTTCGATCACACGGTGGACGACCGGACCAG 6894945 29 100.0 32 ............................. GCCCGTGCGCGGGATCTGGAATCCCAGGGCCA 6895006 29 100.0 32 ............................. TTGGTGATGGGCACCAACGCCGGGACGTTCGA 6895067 29 100.0 32 ............................. GAGCAGAGTTATCGGGAGATTGGCACCGGCCA 6895128 29 100.0 32 ............................. TGGCCGGTGAGTTCGTACCTCGTGCTCTGCGT 6895189 29 100.0 32 ............................. CGGTACCGGGGGGCGGGACGCCCCGCGGCCGA 6895250 29 100.0 32 ............................. ATCTCGCGTAGAGCGCGGTCGAGTTCGTATTG 6895311 29 100.0 32 ............................. TGGCCGGTGAGTTCGTACCTCGTGCTCTGCGT 6895372 29 100.0 32 ............................. CGGTACCGGGGGGCGGGACGCCCCGCGGCCGA 6895433 29 100.0 32 ............................. ATCTCGCGTAGAGCGCGGTCGAGTTCGTATTG 6895494 29 100.0 32 ............................. AGCGGCTCGACGTCGCCGACGTTCCTCGCGGA 6895555 29 100.0 32 ............................. GCGCGGACGATACCGGCCCAGAACCCGGACTC 6895616 29 100.0 32 ............................. ATGACCGCGCCCTGGTGCGCGGCCTCCATCGG 6895677 29 100.0 32 ............................. GGCATCACCAGGTAGCCGGCCGCCGCCCATCC 6895738 29 100.0 32 ............................. TTGACCGGATGAAGGCGCAGTTCCAGGTGCTC 6895799 29 100.0 32 ............................. ACCGCGCGCTCCGGGGTGACGCCCAACCGGCT 6895860 29 100.0 32 ............................. ACCTCGTGGTGAACGTCGTCGCCCTCGCGCAA 6895921 29 100.0 32 ............................. AATCAGATCACCTCGGAACAAGCCGACCCATT 6895982 29 100.0 32 ............................. CTGTGAGCACCACCCGCCGCCCCCTGGGCACC 6896043 29 100.0 32 ............................. CATCCGGACCGCTCTTGGAGCAGGGCCCAGAT 6896104 29 100.0 32 ............................. AGAGACTTCACCGCCTACCCCATCGGTATCCG 6896165 29 100.0 32 ............................. CGGATGATGCTGCGGGCGATGCCCGGCGCCGC 6896226 29 100.0 33 ............................. GCTCATTTCGGCTGGTCATGACGGCCTCGATCT 6896288 29 100.0 32 ............................. CGGGCGCTGTCGTCGGCGGGGTCGCCGCAGTC 6896349 29 100.0 32 ............................. AAGGCATCGTCGTGGTGGGCAAGGCGTTGGTG 6896410 29 100.0 32 ............................. CAGCGCCTGGTGTCGTCGGGCACGGCTTCCAG 6896471 29 100.0 32 ............................. GGCTTCCTGTGCGAGGCGCGGAGCACCCGGGA 6896532 29 100.0 32 ............................. GGTGTGGGCCAGACGGACACCGACAGCAGCTC 6896593 29 100.0 32 ............................. TCCCAACCGGGACGCGGCGACCGGGTGGCGTG 6896654 29 96.6 31 ............................G CCGCAGCCGCGCCGCCCGCTACGCCGAGGAT 6896714 29 100.0 32 ............................. TTGAACACCAGGAAGACGACGACGCCCAGAGC 6896775 29 100.0 32 ............................. GCCTGACCAGGCAACTTGTCGGGACACGCCAA 6896836 29 100.0 32 ............................. GCGGCATCGGCCGGGCCCTGTGGCCTACTGGC 6896897 29 100.0 32 ............................. GCGGCATCGGCCGGGCCCTGTGGCCTACTGGC 6896958 29 100.0 32 ............................. CCGTCCGGCTCCAGGTCGCCGTCGTGGAGCAG 6897019 29 100.0 32 ............................. TCCTCCCACGTCTTGCCGACGACCTCGGCGCC 6897080 29 100.0 32 ............................. AAGCCGACCCTGCGCGTGCCCTGCCCCTCGTT 6897141 29 100.0 32 ............................. GTCACCCCGCCCACGCCGGCGTCCGTCTCGCC 6897202 29 100.0 32 ............................. GCATGCTCACCGCGGGCGCCTGGTCCGGCGTC 6897263 29 100.0 32 ............................. GTCTTCTGTTCCTCGGTCAGATCGGCAGTCGT 6897324 29 100.0 32 ............................. CGGCCTGAGCAGTGCCGACGGCCGAATCGTCA 6897385 29 100.0 32 ............................. GCCCACTGGTCCAGCTCCGGCTCGGACAGGCT 6897446 29 100.0 32 ............................. ATCACGTCGGGCGCGCAGTAGCTCGGCTGGTT 6897507 29 100.0 32 ............................. GTCTCGCCGGTGTCCAGCAGGCCGTTGTTCTG 6897568 29 100.0 32 ............................. CTCGTCGTCACGGCGGCGGGGGGTGATCCGGC 6897629 29 100.0 32 ............................. ATCGCGGATGCGCCCTCCGGTCTGATCGACCT 6897690 29 100.0 32 ............................. CGGAGCACTCCCCCGAGCCGGCCGAAGAAGCC 6897751 29 100.0 32 ............................. GCGGAGTGGACGCAGCAGGCCGTGCAGCTGCT 6897812 29 100.0 33 ............................. CTCGGGTTGTCGGTCGTCCTACTCGCTGAGCTT 6897874 29 100.0 32 ............................. TCGGGGCGCTGCTCGGCGTGCCGGTGCTCGTC 6897935 29 100.0 32 ............................. TTCCGCCTGATGGAGGGCACCCCATGGCAACA 6897996 29 100.0 32 ............................. AGATCCTGGACTTCCAGCACCGCTACGTCTTC 6898057 29 100.0 32 ............................. GCGCCCTGCTCATCACCACGCTCGCCGTGCCG 6898118 29 96.6 33 ............................A CGGCGGGCCGCCTGTGCACGCGGGTGCCACCAG 6898180 29 100.0 32 ............................. GCCGGGTGAGACGTACTGGGCGTTCGCGGACG 6898241 29 100.0 32 ............................. TGACAAGTCCTCCAAGGAATTCGCACTCCCCC 6898302 29 100.0 32 ............................. GCCGCCCTGCTCGCCGACAGGCCGGAGGCCCT 6898363 29 100.0 32 ............................. TTCAGCTCGGCGCCGGTGTCGAGGCGCTCGAA 6898424 29 100.0 32 ............................. AAGCGGTGGTCGCTGACGTCGAGCGGCGCGTA 6898485 29 96.6 32 ..........................T.. GACCGCCTCGCCTAACTCTGAAGGACACCCCA 6898546 29 79.3 0 ......TT..T..C...A..........G | A [6898571] ========== ====== ====== ====== ============================= ================================= ================== 62 29 99.5 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : GGGCGGCGGGCACAGTACCCCCTGGGCGGATGCGGGGACCGGAACTTCTGCCCGCGGCTCACGCTGCACGCTCCAGCCACATCTCCCCGAAGCGGACTCGCCCAGCGGCCTTCCTCTTTGCCGAGGCCCTGTTCCGCCGCTGACAATCCGACTGCGCCGGCCGTGCGCCAAGGCTGTCCGGCGGGAGATGGCGTACGACCGAATCCGACTGCGTCAGCGTCCGGCATGGCTGTACAGGCGCCCAACGCACTGCTGCTACGACCCACGTGGCAGCCGGGCCAGGAGCTTCACCACGGAGCGCTTACCGATATCTTTCGGGAGACGAATCCCACCAACGGGTCCTATCCATAGGACTGTTGGGTACTACCTCCACCTCCCGCGCCAAGCATGCCCAGCATCTGCGCAGCACCGCACAAACATCCGGAAGAACCGAAATGTCCCCTTCCTCAGAAGTAAGGAGTTCTACCTCCCCACCCCACCAAAACCCCAGCTCACGAACT # Right flank : GGAACGCGGGCGTCAGGCGTCGGGCTGCTTCGCGGTCCCGCCTATCAGGGCGATCCGCACACCGACCAGCAGCTCGTCCCGCGTTCCACGAGGTCGTTCCAGATACTGGAGCCTCAGCCTTAGGGCGTTTCCTTCAGATCATCTGATCGTTGGTTGATGTGTGTCGTTGACTGATGCCCAGTGGGCGAGGATCGAGCCGTTGCTGCCGGACCGGACGCGTGATCGCCGGCAGGTGATCGACGCGATCGCTTTCACGTACCGCCCCGGCACGCCGTGGACGGACTGCCCGAGTACTTCGGCTCGCGGAAGTGCGCCCACAACCGGCTGTGGAAGTGGGCCGCCGACGGCACCCGGGAGAAGCTCCTCACCTCCCTGCTCGCCCAAGCCGACACCGATGGCAACCTCGGCTGGATCGTCGCGGTCGACTCTCCACGATCGCCCGGGCTCATCAGCACGCCGCCGGGGCTCGTCAAAAGGGGCCCCGCCCGGCGAGCCCTACC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6909725-6910510 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066774.1 Streptomyces murinus strain Am1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================== ================== 6909725 29 96.6 31 ............................T CCTCGCGCTCCGCGACAGGGCGGAGGGTGAG 6909785 29 100.0 32 ............................. ACGAGATCTCCGGGCACCGCCTCCGATGCGGA 6909846 29 100.0 32 ............................. CGCCACCCACCGCTGCGCCGCCTCAATCTCCG 6909907 29 100.0 32 ............................. CGGTGGGGGAAGTCGTCCTCGGACTGCTCATC 6909968 29 100.0 32 ............................. GCGCCAAGACGATCCTGCGGGATCTGCGGCGT 6910029 29 100.0 32 ............................. CCGGCGACCTTGTCCCACACGGCCTTGATCCC 6910090 29 96.6 72 ...........A................. TCGACCGGGAGGCTGGGGTACCGGGTCGAGGGGTGGTCCCATCGGCGTGTGGATCGGGACGAACGTCGACTC 6910191 29 100.0 32 ............................. CGGGTCCGACTCCTCCGGCGGCTCGACGTACG 6910252 28 89.7 34 .......A...A.............-... GCCGCGCGGCCGATACGTGAGCGCCGCCTATGTC 6910314 29 82.8 32 .............C.......AC..G..G AGCATCGCAGACGCGCGCGATACCGTGCTGCT 6910375 29 82.8 32 ...T......T.TC..........A.... TAGGTGCCTGTGCTACCGAGGGAGACGCACAC 6910436 29 93.1 17 .............C...........C... CTGGGCCAGGAGAGAAG Deletion [6910482] 6910482 29 69.0 0 .C....T...T.TC.......A.C.C.T. | ========== ====== ====== ====== ============================= ======================================================================== ================== 13 29 93.1 34 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GGCTCGTCGAGGCCGGCCGCAACTACGACGGTCCCGCTGACGAGGAGCCCCTCTGGTGACGGTCATCGTCCTCGCCAACTGTCCACCGGGCCTGCGGGGCTTCTTGACCCGCTGGCTGCTGGAAGTCTCCCCCGGCGTTTTCCTGGGCTCACCCTCGGCCCGGGTACGCGACATCCTGTGGGACGAGGTCCGCCAGTACCGAGGCAAAGGGCGCGCCCTGCTCGCCTACCAGACAGACAACGAGCAAGGCTTCACCTTCGCGACCCACGAACACGCGTGGCATCCCACCGACCACGAGGGCCTCGTCCTCCTCAAACGCCCCTCATTCACCGTGAACTCGCCGACACCACCGCCGCAGGGCTGGAGCAAGGCCGCCAAAAGACGCCGCTTCGGTAACTCCTGAAGCCTCCCCCCCACCTACCAATTTGCCCCGAAATGCCCCTTCCCTCGCAAGTAAGGAACACTCCATAACCCACCAACAAAACCCCAGCTCACGAACT # Right flank : CTCTTGCGTGCAATTCTCCGTGGCTCCGCTGTAGGCAGCGGGCGTCGGCATGCGCTGCGTCGGCTCGGTCCCGGCACACCGAACCCCGCCGTACTGTTCCTTGTGTGACCACTCTCGAACGCGCCCGCTGCGAGCTCAAGGCCCACCCCCTCGCGCTCGACGCGGCCCTCGCCGCGGCCGTTCTCGTCTGCATGGTCGCCGGCTCCCTCGCCACTCCCAAGGACGGGCAGGGCGTCACCTGGGGCACCCACGTCCCCGCGCCCCTGAGCCTGCTGCTGATGCTGCTGGCCGCCGTCGCCCTCGTCTTCCGCCGCCGCGCCCCCCGCACCGTCCTCGCCCTCACCGGCACCCTCTCCGTCGTGGAGTGCGTCACCGGCGACCCCCGCGCGCCCGTCACGATGTCCGCCGTCATCGCCCTGTACACCGTCGCCGCCACCACCGACCGCACCACCACCTTCCGCGTCGGCCTGCTCACCATGACCGTGCTGACCGCCGCCGCG # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.31, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //