Array 1 111203-111364 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV821183.1 Anaerococcus sp. HMSC075B03 Scaffold50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 111203 30 100.0 36 .............................. ACTAAGGAGAAAACACAAAAGTGTTTTCACCCAAAC 111269 30 100.0 36 .............................. TCACACAAATATAAGATTTTTTGTTTTTCTTCAAAC 111335 30 83.3 0 .........................NNNNN | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 94.4 36 GTTGATTAATAACATTTGATGTATTGAAAT # Left flank : ATAAAGCTAGATTGCTATAAATTAATAAAATATATACTAGAAGACAAAGAATTCGAACCTTATTTATTAGAAAGGAAATATTGATGGGGAAAAATTATAATTATGCATTTCTATTCTATGATGTTGGAGAAAAAAGAGTAAACAAAGTATTCAAAGTCTGCAAAAAATATTTAACTCACCACCAAAATTCAGTATTTAGAGGAGAAATAAGCCCATCAAAAATTATAGCTTTGAAAAGAGAAATTGAAAAAACAATAAAAAAAGAAGAGGATTTTGTAACAATAATAAAAATGTATAACAAAGAAAGCTTCGAAGAAGAAACAATAGGAAAATACAAATCACTAGAAGAAAATCTAATAATATAATTACCAGCAAAAACAAAAGAATTTGAAAAAATAAAGAAAAGCAAAAAATAGAAATAGCTGGTAAAAAATCAAAAAATCTCATAAAATGGGTAATATATTGATGGGATATATATTTAAAATGTGTATTTTATATTG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATTAATAACATTTGATGTATTGAAATAAAGCTAGCTGTAAAAATGTGTGTATAACAACATATGTTGATTAATAACATTTGATGTATTGAAATGGAATAGAATAATCATCTTTTACAATATCATTCATAGTTGATTAATAACATTTGATGTATTGAAATACCTTAACTTTATCTTTTTCAGCAGGCATTTTAAAAAAGTTGATTAATAACATTTGATGTATTGAAATTCTCTCACTTCTACAAGACCTCTTGTTCTAGTTTGTTGATTAATAACATTTGATGTATTGAAATGCGTAAGTCAAAGTTAAAAATAATTCATTTTTAGCACGTTGATTAATAACATTTGATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.39 # Score Detail : 1:0, 2:0, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTAATAACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 2 111459-111752 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV821183.1 Anaerococcus sp. HMSC075B03 Scaffold50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 111459 30 96.7 36 N............................. AAAGCTAGCTGTAAAAATGTGTGTATAACAACATAT 111525 30 100.0 36 .............................. GGAATAGAATAATCATCTTTTACAATATCATTCATA 111591 30 100.0 38 .............................. ACCTTAACTTTATCTTTTTCAGCAGGCATTTTAAAAAA 111659 30 100.0 34 .............................. TCTCTCACTTCTACAAGACCTCTTGTTCTAGTTT 111723 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 99.3 36 GTTGATTAATAACATTTGATGTATTGAAAT # Left flank : AAAAAAAGAAGAGGATTTTGTAACAATAATAAAAATGTATAACAAAGAAAGCTTCGAAGAAGAAACAATAGGAAAATACAAATCACTAGAAGAAAATCTAATAATATAATTACCAGCAAAAACAAAAGAATTTGAAAAAATAAAGAAAAGCAAAAAATAGAAATAGCTGGTAAAAAATCAAAAAATCTCATAAAATGGGTAATATATTGATGGGATATATATTTAAAATGTGTATTTTATATTGGTTGATTAATAACATTTGATGTATTGAAATACTAAGGAGAAAACACAAAAGTGTTTTCACCCAAACGTTGATTAATAACATTTGATGTATTGAAATTCACACAAATATAAGATTTTTTGTTTTTCTTCAAACGTTGATTAATAACATTTGATGTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TGCGTAAGTCAAAGTTAAAAATAATTCATTTTTAGCACGTTGATTAATAACATTTGATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAATAACATTTGATGTATTGAAATACATTATAGGTTAATTCCAATTTTCTAACATAACCTGTTGATTAATAACATTAGATGTATTGAAATGAAGCAAAAAAATGGGCAGAAGAAAATCTAGATGGTTGATTAATAACATTAGATGTATTGAAATAATATATAGTTGAATCATCTATACTTTTAATTTTTAGTTAATTAATAACATTAGATGTATTGAAATACATCTGAAATTAAATATCTAATGTTTGTGGAGGGTTGATTAATAACATTAGATGTATTGAAATCCGAAATAATAAGAATCTTTAATATTATAATTATAAGTTGATTGAT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTAATAACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA // Array 3 111982-112205 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV821183.1 Anaerococcus sp. HMSC075B03 Scaffold50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 111982 30 100.0 34 .............................. GAAGCAAAAAAATGGGCAGAAGAAAATCTAGATG 112046 30 100.0 36 .............................. AATATATAGTTGAATCATCTATACTTTTAATTTTTA 112112 30 96.7 34 ...A.......................... ACATCTGAAATTAAATATCTAATGTTTGTGGAGG 112176 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 99.2 35 GTTGATTAATAACATTAGATGTATTGAAAT # Left flank : TTGAAATAAAGCTAGCTGTAAAAATGTGTGTATAACAACATATGTTGATTAATAACATTTGATGTATTGAAATGGAATAGAATAATCATCTTTTACAATATCATTCATAGTTGATTAATAACATTTGATGTATTGAAATACCTTAACTTTATCTTTTTCAGCAGGCATTTTAAAAAAGTTGATTAATAACATTTGATGTATTGAAATTCTCTCACTTCTACAAGACCTCTTGTTCTAGTTTGTTGATTAATAACATTTGATGTATTGAAATGCGTAAGTCAAAGTTAAAAATAATTCATTTTTAGCACGTTGATTAATAACATTTGATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAATAACATTTGATGTATTGAAATACATTATAGGTTAATTCCAATTTTCTAACATAACCT # Right flank : TCCGAAATAATAAGAATCTTTAATATTATAATTATAAGTTGATTGATAACATTAGATGTATTGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATTGATAACATTAGATGTATTGAAATGCAACAAAAGCACCAATGAAGAGGGCGGGAAGCCAAGTTGATTGATAACATTTGATGTATTGAAATATATAATCAAGGTCATACTTATATTTTTTTAATCTTGTTGATTGATAACATTAGATGTATTGAAATGAAGTAACCACTATATACTTAAATTCAGGATCTAGGTTGATTGATAACATTTGATGTATTGAAATGTACAAGACCACCTTTTAGCAAGTTCTTTAATAGGGTTGATTGATAACATTAGATGTATTGAAGTGTGAACTTTTCGCTATATAGTTAAATTAAATATATGACATTG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTAATAACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 4 112371-112662 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV821183.1 Anaerococcus sp. HMSC075B03 Scaffold50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 112371 30 96.7 36 N............................. GCAACAAAAGCACCAATGAAGAGGGCGGGAAGCCAA 112437 30 96.7 36 ................T............. ATATAATCAAGGTCATACTTATATTTTTTTAATCTT 112503 30 100.0 35 .............................. GAAGTAACCACTATATACTTAAATTCAGGATCTAG 112568 30 96.7 35 ................T............. GTACAAGACCACCTTTTAGCAAGTTCTTTAATAGG 112633 30 96.7 0 ............................G. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 97.4 36 GTTGATTGATAACATTAGATGTATTGAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAATAACATTTGATGTATTGAAATACATTATAGGTTAATTCCAATTTTCTAACATAACCTGTTGATTAATAACATTAGATGTATTGAAATGAAGCAAAAAAATGGGCAGAAGAAAATCTAGATGGTTGATTAATAACATTAGATGTATTGAAATAATATATAGTTGAATCATCTATACTTTTAATTTTTAGTTAATTAATAACATTAGATGTATTGAAATACATCTGAAATTAAATATCTAATGTTTGTGGAGGGTTGATTAATAACATTAGATGTATTGAAATCCGAAATAATAAGAATCTTTAATATTATAATTATAAGTTGATTGATAACATTAGATGTATTGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TGTGAACTTTTCGCTATATAGTTAAATTAAATATATGACATTGTATATTACTTGAAATTTTATTAAAGGAGGTTTTATGAACTTTATTGAACTTGTAAAGAATCGTTATTCTTGTAAAAATTTTAGTGATAAAAAAGTTGAAAAGGAGAAGCTTGATATTATTCTTGAAGCGGGCAGGCTTGCACCTACTGCTAAGAACAATCAGATTCAAAGAATTTACGTTGCAAAATCAAATGATGCTCTTATAAAAATTGATGAGCTTACTCCTTGTAGGTATAATGCTCCTCTTGTTTTGCTTGTAGCTTTTGATGAGAGTGAGGCTTTTGTTTATCCGGGAGGTAAATATAATACTGGTGTTGAAGATGCTACGATTGTTGCAAGTCACATGGTCTTGGCAGCTTCAAGCCTTGATGTTGATTCTTGTTGGGTAAATCTTTTTGATCCTGATAAGGCTAGCGAAGAATTTTCTTTGCCTAAAAATGAAAAAATTGTTGCAATGA # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:0, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTGATAACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //