Array 1 4436252-4436617 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068595.1 Paenibacillus sonchi strain LMG 24727 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 4436252 33 100.0 33 ................................. ACTGCAACAATGTTGTCCTCAATCTCCTTTTTC 4436318 33 97.0 35 ...A............................. GCCGTGGTTGGGATGTTGATCTGGAGGAACCGGAA 4436386 33 97.0 34 ........................A........ GTTTTTGACAGAAGCATGAATAGAACAGCGGAAC 4436453 33 84.8 32 ..............AA....C.A.A........ AGGACGTTATCCGTGGATGTCAGTTCAGCCGT C [4436475] 4436519 32 81.8 33 T.T.-.G.....G........C........... GAAACCGGTAAGATCGGCAGAAGTTTCATCCTG A,C [4436527,4436530] 4436586 32 72.7 0 ..T....CT....CA.G......A..-.A.... | ========== ====== ====== ====== ================================= =================================== ================== 6 33 88.9 34 GTCGCACTCCGTATGGAGTGTGTGGATTGAAAT # Left flank : AGGGTTATGGATACTATGTGTTGGGAACGGTAGCTGCTTCAAGCTTGATGTATCTTGCAGCGCTGTTCATTCCCGGTTCAATAGGTGGCGGAGATATTAAGCTGCTTACGGTTGTCGGAGCAGCAATGGGATGGTGGAAGTCACTGGTTTTTCTTTGGCTGTTGCTTGGATTAGCAGGAGTATTTGCTGTTATCGGGATGCTGATTTGGAGGAGCGGGAAGCTGAAGATACCGATTGCTCCATTTTTTCTTGCAGCGAACATTTTAATCTTTATGTATCCAATAAAGCTTTGGATTTAATGGAGAGACTGCCTGAGACAGGTGCGAACCTGAAGCTCACATAAAAACACTGGGGAATTCGTACCTCAGAATTTGTCGAAATACCAAGAGAAAGAATTAACTGGAAATAAGTCAAGGGATGAACTATACTTTTTTTATCAGGTTTGAATTTGAAATCGGTAGTATCCATCTTGTAACGAGAACAATAACATAATTTTCACC # Right flank : TAAAAACAAAATACGATGGAATGATTAGGCTCTCGTCAAAAGGCGGGGGCCTTTTTTTTGTTTTGATAAGAATTGAAAGGAGGGGGTGAGAGTCCTTGATGAGCAGAGAAGCGATTTTGGATGCAATGCTATCGGCTACAGCCAAGAATGAAAACATGATGTGGATGCTTGCTGCAATCAGGATGGCTAGTCGTCCGGTGCAAAAAGAACAATTGCGTGATGTGACCAATGCTCTGTATAAGCAGATACATCCACAGGCAGAGGAAATGCCGATCCGTTCTCGGCATCTGCTGGATGAAGCCGCCGCCATGCTGGAAGGGGCAGCGCTGGTACATGTAGCAGAAGTCGCGAAATCCAAGCGCTATACGTTATCCCCTTTGGGCAAAGAGTTGCTAATTTACAGACAGCAGCGGTTGCAGGAGCAAAATAAACGGAAGGAAGCGGGAGGACAATGAACATCAGTTTGAAGTATGGATTCTTGGGGCTGGGGATGGGAGGAA # Questionable array : NO Score: 6.62 # Score Detail : 1:0, 2:3, 3:3, 4:0.45, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //