Array 1 114694-116612 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRGB010000004.1 Prevotella copri strain HDA04 HDA04_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 114694 36 100.0 29 .................................... TTTGAGCAAACTGGGGTCCAGCCTATCGA 114759 36 100.0 30 .................................... ATCGGGAACCCACCAATCACCATGCTCTTT 114825 36 100.0 29 .................................... CCTATTACGCTGTACTTCATTCAAAGGAT 114890 36 100.0 29 .................................... AATATGTATAGAGATTACTCAAATGCAAA 114955 36 100.0 31 .................................... TCTCGATTCCAACCTCTGTACGTGGGTAAGG 115022 36 100.0 28 .................................... AATATGCTAGCTATTCACGTTATCGGCT 115086 36 100.0 28 .................................... ATTTAATGTTTCCGTATGCAGCATAGAA 115150 36 100.0 27 .................................... TTAGTGTAGTTAGATTAATGAATAATG 115213 36 100.0 28 .................................... GACAGAAATCAAGCAAAAGATTTTTTTC 115277 36 100.0 29 .................................... CCGGTTTCTCTTTCGCCATTCCTTTGTGG 115342 36 100.0 28 .................................... ATGATGCTTTCCGCCTTTGCCAGTTGCT 115406 36 100.0 30 .................................... TGTAGTAAGTAGCGTATGAACAGAATGAAT 115472 36 100.0 29 .................................... TCGGCTACCTGCTCGGCAAAACGAGGGTC 115537 36 100.0 30 .................................... TGAAGGCTCCTCGGTTACTTCTTCACCTTC 115603 36 100.0 30 .................................... GGAAAAACAGAACATTTTATAGTAACTTTT 115669 36 100.0 27 .................................... TTTTAATGTTTCTGGTGCAAAGGTAAG 115732 36 100.0 29 .................................... AATAACATTTTGCGTCTGCTTGTAAAAGT 115797 36 100.0 28 .................................... GTATTCAATCCATATCTAGGTGATTATG 115861 36 100.0 29 .................................... CCAGACTTCCCCTCGTTTGTCTATTCTCC 115926 36 100.0 29 .................................... GTGTAAACGGAAGCACGCTATACAACTTG 115991 36 100.0 28 .................................... CTCATACAAGAAAGATGGAATCGTGGCA 116055 36 100.0 30 .................................... CAAGCTGCTACCCTAAAGGGATGGCGATCT 116121 36 100.0 28 .................................... TCAAGTCTAACTCAGTTATCAATAAGCC 116185 36 100.0 29 .................................... GGCAATGCCAAAAAGAAAACCCTCGGTAG 116250 36 100.0 30 .................................... ATGCAGTTGGTGTAAATGTAGGCGATAAAC 116316 36 100.0 28 .................................... GGTAAAATGGTAAATGATTGTGCAGCCG 116380 36 100.0 30 .................................... AGCCAATAACTTTTTGTCGATGCTCATAAA 116446 36 97.2 29 ..........T......................... GGGTTCGGATGGCAAGCTGCCAAAACACT 116511 36 100.0 30 .................................... TTATCGTTTCAATCGGCTCACTTGTCGAAG 116577 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 30 36 99.9 29 GGCTAGTATGCTTCAATAATTTCTACTATTGTAGAT # Left flank : CGTTGTTTTATGGGTTGTAAGTCTGTAAAAGAGTATCCAATATTTGAGTTTTAAATGATAATTGTTAGTTATGACATATCGGATGACAAGATGCGTACCAACTTTTCTAAAATGCTGAAAAGTAATGGTGCCATTCGTCTTCAGTTTTCTGTGTATGAGGTAAGGAATACAAAGAGAATTGTGGATAATCTTGTGGCTAAGATAGAGGCTTATGCTAAACACTTCACAGCAGATGATAGCGTAATTCTCTTTGATGTTGATTCTGATAAGCTTACTAAGTATGGTAATGCAATTCATAGGGATCAAGCTGTAGTCTTTTTTTGACTTAGCAGACCTTAGTCTTTATATTTTTGTAATAAAGCATATAACTTGCTTATTTACAGGTTGTTCTTTGAAATATTGTACCCAATATTATGGGAAGGGGTGGTAATTCTCTTTAAAAAGATATGCAGAAGATGCCTTTATTTAAAGGATTTTTTGTATCTTTGCAATCGATAAGA # Right flank : TAATTCCATAAAGGTTCGATTAATTATTATTGTTCGGATGCTTGGAAATGTAATGTATTGCAAAATAGTTATAGTACTAGAGTGAAACTTTAATTTGAATACTAGGGAGACGTCCGAAAAAGTAGCATTAAGTGTTTTATTAATCCTCCTCAGTCTTCTCCTCCAGCCACAGCATTCGTCTCCTTCAGCCTCCTCATTCGACTCCTTCAGCCATTGCATTCGACTCCTTCAGCTATCGCATTCGACTCCTTCAGCTATCGCATTCGACTCCTTCAGCTATTGCATTCGTCTCCTTCAGCTATCGCATTCGTCTCCTTCAGTTATCGCATTCGTCTCCTTCAGCCACTGCATTCGACTCCTTCAGCTAATGCAGCCGTCTCCTTCAGCCACCGCAGCCGTGTGTGTCAACTCAATGAAGTAGATGAACTCGTGAAATGAAGTGGATGAAGTCGTGAAATGAAGTGGATGAGTTCGCATAATGAAGTTCATGATTTCGGCAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTAGTATGCTTCAATAATTTCTACTATTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //