Array 1 44599-43375 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZTW01000005.1 Neisseria meningitidis strain Neisseria meningitidis isolate B151, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 44598 36 97.2 30 ........G........................... GGACGGCGGTTCTAAAATATGAAAACTCAA 44532 36 100.0 30 .................................... TATCATGATGAGCATATTTATGAAGAGGTA 44466 36 100.0 30 .................................... CTGGAAGACTGGTAAGAAACGAGATGCACA 44400 36 100.0 30 .................................... CGATTTACCACCCATAAAACCACCTCAAAA 44334 36 100.0 30 .................................... CGTAACCGGCAAGGCTTATTTGTCCAACGA 44268 36 100.0 30 .................................... ATAAATCAATACCGTGAAAACCTCATGTGT 44202 36 100.0 30 .................................... AAAAACTTTTTAGGGGGGTCGGAAAAATAC 44136 36 100.0 30 .................................... AGACTTAGCACGTTTAACTTGCTTAACAAG 44070 36 100.0 30 .................................... CAAAAACTTTTTAGGGGGGTCGAAAAATAC 44004 36 100.0 30 .................................... CAAAGCTATAAACACGTTTATCTGTTGTTA 43938 36 100.0 30 .................................... ATGGGGTATGCAATTACATCGCTTGGGTTT 43872 36 100.0 30 .................................... AAATTATACCAATGGCGAAAATCTCGGGCG 43806 36 100.0 30 .................................... GCTCAGTTGGAACAATGAATACATCTTGAA 43740 36 100.0 30 .................................... ATAGGTTCTATTAATACGTCTTTCGTCTTC 43674 36 100.0 30 .................................... TTTTCCAGCGCGATGAGATACCCGGCATAG 43608 36 100.0 30 .................................... CAAAGCTGCGGTATGTCGGGATTGTCTTCA 43542 36 100.0 30 .................................... GTTGCACTATTATTCATTGCATCATCATTA 43476 36 100.0 30 .................................... TGCGGTTTGCAACCAAACGCATATATTTTT 43410 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.9 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //