Array 1 76051-74282 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMR01000019.1 Acinetobacter bereziniae strain TUM15252 sequence019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 76050 28 100.0 32 ............................ AGTGAATCACGCATGAATATATAATCAGATTT 75990 28 100.0 32 ............................ TTGGTCAGATACGATCTTCGCCACAGTTTCAA 75930 28 100.0 32 ............................ AGTGTAATGCGTTGGAACGGATTCAAAAGGAT 75870 28 100.0 32 ............................ ATTTGTTGCTTGGTTATTGCGAGTTGCTCAAG 75810 28 100.0 32 ............................ GATATCATGACTTTTTTTAAAAAAATCTTGCG 75750 28 100.0 32 ............................ GATTTGACATGCTGTTCCCCTGAATTTAAAAA 75690 28 100.0 32 ............................ TTGAGGGTCATTCTATGAAAGCTCTTGATCAT 75630 28 100.0 32 ............................ TTAAAAATTTGATAAGAGAAAAAAGACAGTGT 75570 28 100.0 32 ............................ AGACTTAGAAAAATCGGGGGTGGCTGTCTTAG 75510 28 100.0 32 ............................ TTGTAGCTCCAAAACTGTTCGTTTCATGACAA 75450 28 100.0 32 ............................ TTTATAAAGTGATTTTGGTTCTGCTGGCTGAT 75390 28 100.0 33 ............................ AACCCAAGTAAGTGCAGAAGGACCAAGTTTTAC 75329 28 100.0 32 ............................ ATTCAACGATCAACAAAAGTTGCATGGATTCG 75269 28 100.0 32 ............................ TGAATGTAATATGTATACATGTTCAAAGCAGG 75209 28 100.0 32 ............................ ATTTTCTGGTCGGGAAAACGGCATTTTAATAA 75149 28 100.0 32 ............................ AATCTAATCAGAATTTGATTCAAGAATGAAAC 75089 28 100.0 32 ............................ TTTCTCAAATCTTGTTCTGCTCTGCTCAATCG 75029 28 100.0 32 ............................ TTCATCCGTGCATATGTCTGAGGGGCTTCACC 74969 28 100.0 32 ............................ AACACCTAAATCTATTTGCTCTGGGTCTAATT 74909 28 100.0 32 ............................ AAAACTTGCAGTTGCACATCTGCTTTAGCCGC 74849 28 100.0 32 ............................ AATAATATGACTGAGTAATTGAAGCGGATATG 74789 28 100.0 32 ............................ TTGTTATAATAATAAGCAACGCAAAAGCCCAT 74729 28 100.0 32 ............................ ATTTTCAAAATTTAATGTCGCCGTTTTGGTCG 74669 28 100.0 32 ............................ TTGTACAGCTTGTGATTCATCACTATTTCCAC 74609 28 100.0 32 ............................ AGTATGATTTTGAACACCTTGTTCTGATAATT 74549 28 78.6 32 .C...C.G...T.....C.......G.. TATACGTCATGATATTGAGCAAATATTACTCA 74489 28 92.9 32 .....C...................C.. TTGCAAAAGCAGCTTTGGCTAGTGCAATGGAA 74429 28 85.7 32 .....C.G..A......C.......... ATATTATTTTTAGGGGAATAACAATGAATGAA 74369 28 89.3 32 .....C.....T............A... ACTACGAGCTGATAAGGGGATAGACATATCAC 74309 28 75.0 0 .....C.....T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 30 28 97.4 32 GTTCATTACCGCATAGGTAGCTTAGAAA # Left flank : TCAAAGTGGCTAGAAAGATTGGTAGACTATGTTCATATCACTCAACCACGAGAAGTTCCAAAAACAAAAATCACTGGATATGCCCATTATTTCCGAATTAATCCAAAAATGACTTTGGAGGAACGTATTGCTCATCAGGCTCAACGACGAAGCATTTCTTTTGATGAAGCTCAACAACATTTTAAGCAATATAGTGAACAACCTGAAATTGTTCCCTATGTCAGTTTAAAAAGTTTAAGTACTAAACGTGAACAAAATATAGATCGATATTATCGGTTATATATTGGGAAATCTGTTGCTGAAGAAGCAAATGATGGAAAATTTGGAACATATGGTCTCAGTAGAACAGCAACAGTCCCCGAATTTTAACCCAATATTTTTCCACTCTTTAACAACTTAATAAAATCAATAAGTTATAACAGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTAATCTAAAATTATA # Right flank : TATAAACGCCTTAACATCTTAGCTAAATTTAGGAAAGTACAAACATATGGAATAATTTTTACAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAATACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACAC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 67405-65815 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMR01000004.1 Acinetobacter bereziniae strain TUM15252 sequence004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 67404 28 100.0 32 ............................ TATTTTAAGGGTGCATATCCTGCATTAGAAGC 67344 28 100.0 32 ............................ AGTACCGTGTGAATGCGAGTTTGAATTCTTTA 67284 28 100.0 32 ............................ TTTAGTTAAAAATAATTTAGATGAATTTTGAG 67224 28 100.0 32 ............................ TTTATTCATTCCGTTCTCAGGTGTGAATTCGC 67164 28 100.0 32 ............................ ATCCAGCTCGATGTCGATTACAAATGTCGTGA 67104 28 100.0 32 ............................ GAAACATGAAACGTGGGTATAACAATGAAACC 67044 28 100.0 33 ............................ TCTTAATTAATACGGCTTAATAAAATTTCCCAA 66983 28 100.0 32 ............................ GCAGCGTGGACAGATGTCGGGGGTCAGTCTCC 66923 28 100.0 32 ............................ AACCAATGAAAACCCCGAGACAAATAGCAACG 66863 28 100.0 32 ............................ ACAGTATGGTTGAACTCGTTGGCTACGGTGAA 66803 28 100.0 32 ............................ GCTTGAAATCATCACCTCGCGAACGTTATCCG 66743 28 100.0 32 ............................ AACCCCGATTAAACGCCCCCATTCGATTAACG 66683 28 100.0 32 ............................ GTGACGGGTTAGAATCTTCGGTCTATCTGAGT 66623 28 100.0 32 ............................ GCCCTGAGATCGTAAAGTTAAACTAATATCCT 66563 28 100.0 32 ............................ TTAGCTGTATTGGACCAGTTAATTCCTGTTTG 66503 28 100.0 32 ............................ TGAAGGGTTTGTTTTTGTGCCGAAAGAATTGA 66443 28 100.0 32 ............................ TCAACGCACCCATGCGGTGTGGTACGGTCGAC 66383 28 100.0 33 ............................ TGTTTGTGTTCCAGTGTCAGGGTCAGTTTTATT 66322 28 100.0 32 ............................ GACAGTCCAGTTAATAAGACGAATATCAGACA 66262 28 100.0 32 ............................ ATTGTGCGGGGGTGGACCTTGTACTTAATTGA 66202 28 100.0 32 ............................ TTGAACGGTATAGATCGCAATAAATCCAGATT 66142 28 100.0 32 ............................ TTGCCAGTCCCAACGAATTAGATAATTCCAAT 66082 28 100.0 32 ............................ TCAACAGGTAGGCTAGAGATCGTTGCACTATC 66022 28 100.0 32 ............................ TACAACCAAGCATGTCGCTATCACATTGGCAA 65962 28 100.0 32 ............................ TGGAGCATGAGCCGAGAGAAATTGACACAGAA 65902 28 100.0 32 ............................ TATAGTATATAAAAAATTCTATTACCCCAAAT 65842 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCTAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATA # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTGGTATAAATTGTTTATTTTATAGCAATAAAAAAGCCCACTTGAATCAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 7005-7874 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMR01000080.1 Acinetobacter bereziniae strain TUM15252 sequence080, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7005 28 100.0 32 ............................ CAAGACTTCAAGAATGGGTTAAAGGTCTTTTA 7065 28 100.0 32 ............................ AAAAGGCTAAAAGCAAATGAGCGTAGATAGTA 7125 28 100.0 32 ............................ AGTGGCTCAATTGGTTGCTTTGGATTTTACAG 7185 28 100.0 33 ............................ AATTAAGCTTCTGTGGGATTGATACAGATACAA 7246 28 100.0 33 ............................ ATGTACACCCTTACAATCTCGGGTGAAAATACA 7307 28 100.0 32 ............................ AAAGACTACAAACCAAGCTGCAGACAATCACA 7367 28 100.0 32 ............................ ATAGCTGTATGAGATGTAGGTAATCTTTCCCA 7427 28 100.0 32 ............................ AAGCGTTTGCAATGTCGTTTGCCATATCCTCA 7487 28 100.0 32 ............................ TGTAGGTGCAGAATATAACCCTGCGCCTGTTC 7547 28 100.0 32 ............................ AACAACGGCAGAATTAGAGGGTACAGCTTTAT 7607 28 100.0 32 ............................ TTTTGGAGTTGTAACGTCGGGAACAATACTGC 7667 28 100.0 32 ............................ AGAAGCACAGGCAATGTATATCAAAGCGCGAG 7727 28 92.9 32 ..................C.T....... TTTCAATAAATAACAACGATCAAAACAATAAA 7787 28 100.0 32 ............................ ATTCATGGCATCGGTTGAAGTTTCAGATACAT 7847 28 96.4 0 .............G.............. | ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : AAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCGCGATCATTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTTGCTTAGAAACCTTACCAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 8336-8483 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMR01000080.1 Acinetobacter bereziniae strain TUM15252 sequence080, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8336 28 92.9 32 A.................T......... CCTTACCAAAGCGATATAAGCCATCGCACCGA 8396 28 100.0 32 ............................ ATGTCAACATGTGTACTACTGAAAGTCTAAGA 8456 28 75.0 0 ...............A..C.T..GT.TG | ========== ====== ====== ====== ============================ ================================ ================== 3 28 89.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : TTCAGATACATGTTCACTACCGTAGAGGTAGCTTAGAAAAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCGCGATCATTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGC # Right flank : TGCTAAATAGAATGTTTATTTTCACTTGATTGTTTAGGTAAAATTCATAAATTTCACAAATTGTTTCCTACTCCAATATCGCTTAGAAAACTGTTTTGTTTAACAGGATGATCAGCTTTTTTTATTTATCTCAATTTCAATAAATGGGTTAGGCAAGATCTTTTATATTCAAAGTTGATAATAGATGAGTAATTTTCTTATTGAACTTGAAAAAATTAAATGAATAAATCTCATCTTTTTATTGAATAGGCGTATTTATAGCGCTGAAAATTACTTGATTTTTAATTTAAAAATAAAATAGTTACGTCGATTTTTTATAATTTCGCAGCAACTAATGAAC # Questionable array : NO Score: 3.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.09%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //