Array 1 1049-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZTT010000111.1 Bacteroides sp. AN502 scaffold_111_size_1053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1048 47 100.0 30 ............................................... GCCGCAAAAATTAAAGCCAGGGAAGCAACC 971 47 100.0 29 ............................................... TTGCAATTCCTATTGAGAAAAAAGAATAT 895 47 100.0 29 ............................................... CTTGCTGAACTTGGTCTGCGCTTGCATCA 819 47 100.0 29 ............................................... AATATGATTTAGATTATATTGAGGAGGAT 743 47 100.0 30 ............................................... GTCGCCTCCATTGCGGCACGGTCGACGCTG 666 47 100.0 30 ............................................... AAAAAAGGTTCTTATGAGAACTTTGTTACA 589 47 100.0 29 ............................................... CGGTCGCAAACGGTATGTATTTGCTTTGT 513 47 100.0 30 ............................................... CGTTTTCGGCACATGTACCGTCTTCATTCT 436 47 100.0 29 ............................................... ATGTCTGTAAAACTATGCCGTGAAGCATA 360 47 100.0 30 ............................................... CTACATGGATTACAGAGTTTCCCAGGTTGT 283 47 100.0 30 ............................................... TTTCCGTTCCAGTCTGTTCAGTTTCTGTTC 206 47 100.0 30 ............................................... TCCATCAATGACCGGAAAAACGAAAGATGG 129 47 100.0 30 ............................................... TCTGTATCGCATTCGTTGGCAATCGTGTTA 52 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 14 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Left flank : CGAA # Right flank : CAATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [8.3-5.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 1-660 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZTT010000013.1 Bacteroides sp. AN502 scaffold_13_size_87179, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1 47 100.0 29 ............................................... CATATCAACAGTATGCTAAACAGATACAA 77 47 100.0 30 ............................................... CTGTAGACGTAAGCGGAGGTTAAGCGTACG 154 47 100.0 29 ............................................... TGAAGCGCACAGGTCACAATATGCCACCA 230 47 100.0 30 ............................................... GTATATTTTGAGATACAAAACAGATTGATA 307 47 97.9 29 ...................C........................... GTATATGCTATCACGTTGCAGCATTACCC 383 47 100.0 30 ............................................... AGTCGGCATCCTTTGAAGTGCTGGGCCAGT 460 47 100.0 30 ............................................... ACATTCTGGCAAATTCCGCCGCCGGGCTGA 537 47 100.0 30 ............................................... TGCGGTCTGTTTCTGGATATGGGACTGGGC 614 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 9 47 99.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Left flank : | # Right flank : CTGATTTTCAATAACCATCTATAATCCAATAACTTGTAAAGAAAATCAGAATAAAAAAAGGAAGTCTCCAGAAATGAATAATCCCACTCAAAGTGGGATTATTCATTTTCAAAAAAGCTCCAATTGCTGACCAGGAGTGTTTACCGGCTGAGGTTTCTTACCCAAAAACAATTCAAGATTGCCAAATTGCTTGTCGGTAATACAAAGAATGCCAACTTTACCATATTCCGGTAAAAATGACTTTACCCGCTTAATATGTACATCCGCATTCTCGGAACTCGCACAATGACGGATATAAATGGAAAACTGAAACATGGTGAAGCCATCTTTCTGTAATTTGTTCCGAAAATCAGTAGCAGCCTTTCGGTCTTTCTTCGTATCGGTAGGCAAGTCGAACAATACCAATACCCACATAACTCGATATTCACTGATTCGGCTCGTCATCGCTCAGGATAAGCTATCCGCCTCAATTCACCGTCGAAGCACTTATACAACGAAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 512-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZTT010000019.1 Bacteroides sp. AN502 scaffold_19_size_77541, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 511 47 100.0 29 ............................................... CCGAAAAGTCACTATCAATGCCACGCGTT 435 47 100.0 30 ............................................... TGGCGCTTCGAAATCAGTATAAAAGCACAT 358 47 100.0 30 ............................................... TTATCGGATAGTTATCGCAGGCTTAACAGC 281 47 100.0 29 ............................................... CGAATTCGCAACGCTGTGCATGAACCCCC 205 46 97.9 30 .....................-......................... CGCGAGGTTAAGGATAAGCCGTGGATTAGA 129 47 100.0 30 ............................................... GCTATCGACGCTGCTATTGCGGCTTATGCT 52 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 7 47 99.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Left flank : CGTCAGCATCCGCCTCGCTCTTTTTCAGGTAGAACGAAACCTTTACATTCGTCTGATTCATACTCTTTTCCTTTCGTTGCAAAATTACCGGATAAAAGCCAAATGAAAGGCATGACGAATATGGCAGAATATGGAAACAAGTCCCATGCTCGAAAGAACCGGCCCGTATTTTTTCTGCTTTGCGAAAAAATGGCTATCTTCGCTAACGCAAAATATGCAGGAACAGCGTTCTTTACGGTGATATGACAGAGGAATCGGAAGCCCGTTTCGCACGGTTTTCCCAATCTGAAAAAGGCAACGGATAGGTAGCGATTTATTTTCTTAACCCCTCAAAAAATGGCAAATGTGCCCCAATGACGGATACGGAATACAACCGCACATCACCTTTCATTTCCAACAGTTTGCATTATTTCTCCAAAATCGATCCGTATGTGGGCGAGTTTTAGTATCTTTGAACCATTGGAGACAACTCTTATTAGATAAATTAATATAAATGAAGA # Right flank : CGCTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 360-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZTT010000106.1 Bacteroides sp. AN502 scaffold_106_size_1218, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 359 47 85.1 30 .......A.C.T.....TT.............G.....A........ TGTCATCGAGCATCTCTTCTATATCGACAT 282 47 100.0 30 ............................................... ACACCACGGACAAATGCACCTACATCTACC 205 47 100.0 30 ............................................... CAGGCGGAACCCTTTAACACACAGACTTAT 128 47 100.0 30 ............................................... ACGTAAGCGGATGTCAAACGAACGAACACA 51 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 97.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Left flank : CCGCTGTAATCGTGGAGAATGGATAATGGAGAATTGGAAATTAAGAATGCGGCCGAAATTAATTATCCATTATCCATTATCCATTCTCAATTATCAATTAAAGAAAATTCTCAATTAACGAAGTGGACAAGAAAACAATTTGGAAAACCATTATCCAGACGCTGGTCACCATCCTGACCGCTATTGGAACTACGCTGGGCGTCACCAGCTGCATGATGTAGCCCTGCGCTGCATGCGACAACACAAACACTGAATGAAACACCCGCTGCCTCAGGAACCTTGCAAAACAAAGGAATGAGGGGCGGGTGATTTGCTTCACGCCACTCGTTTCTCTAAACAATCTTTTACACCCAATCAGGCTTCGAAAGCCAGCTATATTGCAATTATAAATTACAATTACAGTAAAACAAATTTTAGCACAACCTTACTATTCGACTTAGAATTAGCAGCTTTAAGACATCAAAGGACAGCTAATATATCAGAATTTGAGGTTTAACTTC # Right flank : CTCAT # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //