Array 1 1481292-1478881 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009470.1 Staphylococcus schleiferi strain 1360-13 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1481291 36 100.0 30 .................................... ACCCAGCTGTCATCCTCTTGTTCTATGATA 1481225 36 100.0 30 .................................... ATGAAAATCAACAACAGTCTGTCGCTTATG 1481159 36 100.0 30 .................................... AAATAGCCATTAATTAAAGCTATTTTATTT 1481093 36 100.0 30 .................................... AGAGGGAATCGAATTATCTTTAGAGGGGCG 1481027 36 100.0 30 .................................... AAGAAAAGGTATCTATACGCGCTATACCTG 1480961 36 100.0 30 .................................... ACGTATTTAACGCAGAACCATCGCCAGTCT 1480895 36 100.0 30 .................................... AAGGGACACTTGAACCTATCATGCCACTAT 1480829 36 100.0 30 .................................... ACGACATAGAAGAGTATACAGGTCAACCTC 1480763 36 100.0 30 .................................... ATACCACTTCATAAATTCGGTATTGAAACA 1480697 36 100.0 30 .................................... CGAATAATAAGCACTATATTATTCACGACG 1480631 36 100.0 30 .................................... GCACCTTATGGCGTGTTCTTTTCTGCGTTC 1480565 36 100.0 30 .................................... TAATCCTTACATATCCATTTCCGTCTCTTT 1480499 36 100.0 30 .................................... CGATTATCTTCTCTTCCGACAAATCGTTGC 1480433 36 100.0 30 .................................... AATCAAAAATGACAAACTTTACTTTAAACA 1480367 36 100.0 30 .................................... TCAGAAGAAAGTTACTTAGACATCAATGAC 1480301 36 100.0 30 .................................... TAATGTTTGAAGCTACAAAGCAAACGAAAG 1480235 36 100.0 30 .................................... TGACCGTATCCACCGCCGTAATTCGCGCCA 1480169 36 100.0 30 .................................... ACTTCTGTCCATTCATCCTCAGTAGGGTAT 1480103 36 100.0 29 .................................... GTATTAATGATTTGATGGAAAAAGATTTA 1480038 36 100.0 30 .................................... ATTTTGCACCCCCTATGATTGCTTTTGCCG 1479972 36 100.0 30 .................................... AAGAAGCACAACATGAAGCGCCTGAAGCTG 1479906 36 100.0 30 .................................... CTTCTCTAGCTTCTTTAGAACCTTGTTGTA 1479840 36 100.0 30 .................................... CGGCCATTGCTTCAACACCTTGCAACATTT 1479774 36 100.0 30 .................................... CGAAAGTTATTTATTATCCATACGATACAG 1479708 36 100.0 29 .................................... TATTAGGAATACCAACTCCAATATCACCT 1479643 36 100.0 30 .................................... AAACATTCACTGTTACAACATACGTGGCTG 1479577 36 100.0 29 .................................... AAATATTGGTTTTTATTAAATGCATTTAA 1479512 36 100.0 30 .................................... TAAAAGAGTTAGTGAATAGATAGCAACAGC 1479446 36 100.0 31 .................................... GCAGAACCTCAAAATATAAGTTTGAAATTTA 1479379 36 100.0 30 .................................... TTCAACAACCATTACATTGCCTACGTTTTT 1479313 36 100.0 30 .................................... GAGGAAACATGGAATTAAAGGTAGCTTTGG 1479247 36 100.0 30 .................................... GGATAGAGAAAAAATCACATATAGAAACTG 1479181 36 100.0 31 .................................... GATGGTGGACGCGAAGGTTGTGTTATTTACG 1479114 36 100.0 30 .................................... GGCAACTACTTAATTCAACCTGATGTAAAA 1479048 36 100.0 30 .................................... TGATGAATTTGGTTTTTAGGAGGTGTGAGC 1478982 36 100.0 30 .................................... ACGCAAGATGAAATGGCTCGTTTGATGGGG 1478916 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 37 36 100.0 30 GTTTTAGTACTCTGTAATTTTAGGTATAAATGAAAC # Left flank : ATTATATTAGAAATGAAAAGCAATTATTGACAGCAGAGTTTATTGATCACTTGGTGTGGGATGCACCACTTAATTTTGAAAAGCATGAAATTAAACGTAGCTTAGAAAAAATTATTCAATTATATCAAGAGGTCATTGAATTAACTCCGAAGATTTCAAATTATAATTTAGCTGATATCATTGTGTTTGAGCCAATAGATATCTATGTTGTTGTAAGATACCTTAAACATGCAAAACAAGATTTTGAATTGGATATCCATTATGATAATTTACCGATTGCTGTAGCGAAATATATCAAAATGTATGATTTGAAGTTTAATAAATAAATCTAAACGCCTATTAAAGGGAAAGGTTCTAGCGCTTGGTCAATTGACTTGTAAATCAATCGATTAATCAAGCGCTTCTAGATTATTTTAAACAAAATTAAACGAAAATTTAAAAATGTCTAGCATAAACTTGCTTATAATAATCATAAAAATAAGCTATAATTATAGCTAGAG # Right flank : CAAGAAGATAGGATATTAAATTACATTTATGGTTTTAGCACTCTACAATTTTAAATGAATACTAGTCACGGTTTGTTATAAAATTTGTTTATAATAAAGACAGAGATGTTTTCTAAGATACCTCGTGCTTTTTATTGATTGTATAGCACAAAAAGGCAGAGAAAAATTTGTGAATGTTTTTAACATTTGATATTAAAAAGAGACAAGAATCTTAATTATGATTATAACTATGTAAATGATTATAAAACTTGTATCTTTATATGTAGTACTGTAAGTTTAGTAAACAAATTAGAACAAATTTTAAAATTTTTTCAAGACTCATATAATTCAATATATGAAAAATACAATAATACTAAAATCAATTGACAAGTATTATTGCTACTGGCAAACGTTGTGACATAAACAATACGGTAGCTTTGTCTATAAAAGTATAAGCTCATTGATGTGAATCTGCTATACACATCAATGAGCTTTTATTTTTAAAGTACTTGTAGAATGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAATGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //