Array 1 47472-48171 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAQRA010000002.1 Proteus mirabilis strain PM906 contig_2, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     47472	    29	 100.0	    32	.............................	AAATAGAACGTATCGCAGCTGTTATTTCTGTT	
     47533	    29	 100.0	    32	.............................	TTGATTACGTTTCTCTCAGCAAAACAGAAAAA	
     47594	    29	 100.0	    32	.............................	CGTTAATGACTTTAGATGTTTATAACCGTTTA	
     47655	    29	 100.0	    32	.............................	TTTTACAATGTTTTATTAAATGGTGTTCGACT	
     47716	    29	 100.0	    32	.............................	GTGTAAACCGCATCTTGTTCAGGGATTTCTTT	
     47777	    29	 100.0	    32	.............................	AATGCGCAGACGACCTTTTAAGGCTTGGTTAT	
     47838	    29	 100.0	    32	.............................	GGGAACCGTTCCGCTTTGCCATCTTATTTGCA	
     47899	    29	 100.0	    32	.............................	GTGAAATGATTGTTCGCAATGATATCCGAGGC	
     47960	    29	 100.0	    32	.............................	CATCTTCAAAGACTTTCTGACTGTATGGCTGA	
     48021	    29	 100.0	    32	.............................	CGAACGTGATGACCAAACACATGTACACACCA	
     48082	    29	 100.0	    32	.............................	AATGGGCTGAGGACGAGGCAATGAACAATGAG	
     48143	    29	  96.6	     0	..........................T..	|                               	
==========	======	======	======	=============================	================================	==================
        12	    29	  99.7	    32	GTGTTCCCCGTATGCACGGGGATGAACCG	                                	       

# Left flank :   TCCCAATGCAAAACCTGCGCTTGATTGTCCCGTGGTATTTCCTTATGCACCTAATGCCGTTTTAGTCGGTTTTCTGAGTAGTTTTGCAGCGGGTGTCATTGGCATGTTTATTCTTTATGCTTTAGATTGGACTGTGATTATACCCGGGGTGGTACCTCATTTCTTTGTGGGTGCAACTGCAGGCGTATTTGGTAACGCCACAGGGGGACGCCGAGGTGCTATTTTAGGTGCTTTTGCTCAAGGTTTATTGATTACTTTCTTACCCGTATTTTTATTACCTGTACTTGGTGATATTGGTATTGCCAATACCACATTTAGTGATGCAGACTTCGGTGTGATTGGTATTCTATTAGGGATTATTGTTCGTTAATACTACCGACGTTGATATTACTTATTAGTGGAATTTTAATAAATGCCCGACTTTTTAACCCGTCGGGCATTTTTTTGGTAGAAATAGTGTATTTAAATTTTCTTTATAGATTCAATCTATTATGATTAGA
# Right flank :  GATCATCTTGTGCATTTTTATTATGTACTGTTTTCTAAATATTCTAAGAGTTATGTTGTGATATTAAGTGGGCAATAAATTTTGAAAAGCCACTATAGTCAATTCATATATGTTGTAAAATAGCAACATATATGAAGTTTTGATAAAGTTTAATAAGAAGTAGATCTCTTTTTAAACATTATTTAGAGAAAAAAATAGCTATTAATTGTAATATCTTCCTGTGGTAAGAGAACGAGTTAAGCGAAATGGATAAAGATTATTATAGCTACTGGGGCAAGTTTAAATCAGAAAATAATCATGAATACTATCATTTGCTTCCATATCATAGTTTGGACGTGGCTGCTGTAGGTATGATATTGTTTCCAGAAAACTCAAAAATTATAAAAGATATTTCTACTTTTTTACAAATACACCCAAAAGAATTTTCTAAACTGTTTTTATTATTGCTTTCTCTTCACGATGTTGGCAAATTTTCTTCTTCATTTCAATATATTAATCCA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGTATGCACGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-10.30,-9.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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