Array 1 284529-286384 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCKM01000002.1 Moraxella catarrhalis strain 113/391/3 NODE_2_length_338601_cov_10.360116, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 284529 28 100.0 32 ............................ ATCAGCGAGCTTACCGACCACTCAATGTATAA 284589 28 100.0 32 ............................ GCTTTGATTTTAAACGAACGCCAAAGCTGTGA 284649 28 100.0 32 ............................ AATCAGGTAGAGCGGTTGTCCATGTTGGTGTT 284709 28 100.0 32 ............................ GTGGGGTCATACGCCCCAAAAATGATGGCCAC 284769 28 100.0 32 ............................ AGCTTGCCACCGCTCAAAACGAGCTAAGCACC 284829 28 100.0 32 ............................ AATCAGGGGGCAAAGGACGCACGCCACAAATT 284889 28 100.0 32 ............................ CAAAAATGATGGCCACAAAGTCAAACACCCAC 284949 28 100.0 32 ............................ CTAGCCGCTGGCATCATGCTGACCGCTTTGAT 285009 28 100.0 32 ............................ GCTAACAGAGCTTTCAACTGTGTTAATGCGTA 285069 28 100.0 32 ............................ GAGCAAATACGCAAATTACCGCTCCGAATATC 285129 28 100.0 32 ............................ ATTTTCACGGTTCTGCTGACGCAACGCTCCCC 285189 23 82.1 0 .......................----- - Deletion [285207] 285212 28 100.0 32 ............................ GTGCTGAATGTGAAAGCATTGCATGGTCGGCT 285272 28 100.0 32 ............................ ATCTTTGCACATAGAGACCAAAACCTTATCAA 285332 28 100.0 33 ............................ TTCAAAATGAGCGCCCAAAATTATTACAAGATT 285393 28 100.0 32 ............................ AGCCACAACACCAAGTGCACCCCAAAGATCAT 285453 28 100.0 33 ............................ AAGCTTCAACGACTGGGGTTTTTTCACTAGAAA 285514 28 100.0 32 ............................ TTGTAGCTCAAAATTGGCTTTGGCGATGTCCA 285574 28 100.0 32 ............................ GCCTTGGTGTTGTCAGTTTTTGAGCAGAACGA 285634 28 100.0 32 ............................ TTACACGCTACTGACCTACATTTGGGTAGGAC 285694 28 100.0 33 ............................ AAGCTTCAACGACTGGGGTTTTTTCACTAGAAA 285755 28 100.0 32 ............................ TTGTAGCTCAAAATTGGCTTTGGCGATGTCCA 285815 28 100.0 32 ............................ GCCTTGGTGTTGTCAGTTTTTGAGCAGAACGA 285875 28 100.0 32 ............................ TTACACGCTACTGACCTACATTTGGGTAGGAC 285935 28 100.0 32 ............................ TCATTATTATCGCCAAAACTCACCCAGTCAAA 285995 28 100.0 34 ............................ TCTCAAACCCTGCCCCGTTTAGCGTATCAATAAT 286057 28 100.0 32 ............................ AGTTATCGGGCTTGTATTCGCCATTTTCTTTA 286117 28 100.0 32 ............................ TATCGCAATTTTGTTAAAAATGTGATAACCTT 286177 28 100.0 32 ............................ ATAATTAACAGTTGCACAACCAATCTTAAAGA 286237 28 100.0 32 ............................ ATTGGGAATTATTAAGAGTTTGATCAACAGTA 286297 28 100.0 32 ............................ ATTGACTGAATTTACCGCAGTTTCAATCGTTG 286357 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 32 28 99.4 31 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACTCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACATTCAATCCAGA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //