Array 1 1459217-1460059 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP024067.1 Ligilactobacillus salivarius strain BCRC 14759 chromosome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	====================================	========================================	==================
   1459217	    36	 100.0	    36	....................................	CTGCTTAAACGTTTACTTAGCTGGATCGTCTGGTTC    	
   1459289	    36	 100.0	    35	....................................	TCAGTTACCTTGACAATGTCGCAACCATCTGATGT     	
   1459360	    36	 100.0	    38	....................................	AAAGTTGATTGTAGACCTTGTGCGATAATTTCATCGCT  	
   1459434	    36	 100.0	    38	....................................	CATAATCACCGCCTAATTCATATCTTTCTTTTTCTTAG  	
   1459508	    36	 100.0	    38	....................................	TCTTTCATCTAGTGATAATTCCATGTAGTCTATCATAA  	
   1459582	    36	 100.0	    38	....................................	TCAAGCGCTTCGGACGATGTTATTTTTTTGAGTTGTCT  	
   1459656	    36	 100.0	    37	....................................	TTGCAATTCTTCCAACGAACCAGCAAAGTGCATAACG   	
   1459729	    36	 100.0	    38	....................................	AATAGTTAATGTTTTCATTGCAACACTCCTTTATTCCT  	
   1459803	    36	  94.4	    40	G....................A..............	TCTTCGTGTCGTGTGATTGCATTGTATTTATAACCATCAG	
   1459879	    36	  97.2	    36	.....................A..............	TGATTAGCACCCTCCATACTGTCTATGTTGTCATAT    	G [1459881]
   1459952	    36	  94.4	    35	.G...................A..............	TTTTTTGTTATGCAAATATTTCTTCTTTTTGTGTT     	
   1460023	    36	  86.1	     0	.G...................A...........TCT	|                                       	T [1460053]
==========	======	======	======	====================================	========================================	==================
        12	    36	  97.7	    37	AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC	                                        	       

# Left flank :   CTACAGGACTGAAATTGCCAACTTTCATTGAGGAAGGAAGATAAGAATGATGCTATTAATATGTTTTGATTTACCAAGAAATACAAAAGAAAATAGAAGGGCTGCGGCAAAGTATCATAAAAAATTAATAGAATTGGGCTTTACAATGAAACAACTTAGTATGTATGAAAGAGAAGTGAGACAAAAATCTACTAGAGATAGAGTAATTAAAGTATTAAAAGACGAATTACCTAAGGCAGGATCAATTACTTTATACTTACTTCCTAATGAGGTAAATGATTCACAAATAACAATTTTGGGAAGAGAATCTATTAAAAAAACTGTTAGAAAACCTCAATTTATTGTAGTATAATATAACTACACTAATTGCTAGATAATAAGATTAAAAGTTTGTCTAAAATTTAACCAAACAATGCTTATTAATGTGACCTATTGCCCATTTAGGGTACCATTAAAAATGTTAGTTATTGTTGATATATCAATTAACTAATTAAAGAATG
# Right flank :  TAATTTAATTAAAGTAGACAAGAGAAAGCGAAAATTAGAAAAAATAATATATAATATAGATAACTAATTAGAAAGTGGTGTAATTATGACAACATTAATATCGTGTATTGGTGATACAGATCCTATAAGAAATAGACACGATGGAGCTTTATTACATTTAGTAAGGGTATTTCGTCCCCAAAAAATATTATTAATATATTCTGAGCGTGCTTTATCAAAAGAGACTAATATTTTGTTAGCATTGAATTCTATAGATGGATATAATCCTATGATCGAAAAAAGTGATGAAGTCATTTCTGATAGTGAAGTATTTATTTTTGATAAAATGTATGAAGTACTAAATGGAATAATTTCAAAATATTCTAAAGAAGATGAAGATCTAATTTTGAATTTGTCTAGCGGTACGCCACAAATGAAGTCAGCGCTATTTACTATTAATAGATTGAAAGATATCAATGTTAAGGCTTACCAAGTCGTAACTCCTAGTCATTCTTCAAATG

# Questionable array : NO	 Score: 3.15
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.60,-7.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
//