Array 1 1299644-1303216 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024930.1 Aeromonas veronii strain Aeromonas veronii X11 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1299644 29 100.0 33 ............................. GGGTTAACTTCTCCAGCATCCGGCAGGGCACCC 1299706 29 100.0 32 ............................. GTATTCTCGGGTGTCAGGATGGCAGATATAAC 1299767 29 100.0 32 ............................. CAGTTGTCCATGTTCTACGGGTCTGACTCACA 1299828 29 100.0 32 ............................. GCACCAGAATGACCCTGACCTCTTGGCTGCTA 1299889 29 100.0 32 ............................. GCAGCTGAGGCTGCTCTGGTGCGTGGAGAGAA 1299950 29 100.0 32 ............................. CCATCAATCGGGTATTTGGCGCGCACACTTGG 1300011 29 100.0 32 ............................. CCCAAACCAGTACCATGAATCACAAAACCAAC 1300072 29 100.0 32 ............................. CCAATCGTTAAACTCGCGGCGGCCAGGTGAAT 1300133 29 100.0 32 ............................. ATGATGGACAATTTCCGGGCTGGCCGTGCGCT 1300194 29 100.0 32 ............................. CGATCAATGACGGCGGGGGCGTCCGGGCTAAC 1300255 29 100.0 32 ............................. CAGAGTCTTGAGAGTGGGCAAGTGAGCGCGAT 1300316 29 100.0 32 ............................. ACCGCAGGCCGCAATATCTGGGTGTGACAGGC 1300377 29 100.0 32 ............................. CCATTGGGCTGGTCTCGCTTTCAAAATCTATC 1300438 29 100.0 32 ............................. TCGCCAGAGCGCCGCAAGATGGAGGGGGAGTT 1300499 29 100.0 32 ............................. GCTGGGATGACGCCCCGCACCTTGGCGAGGAC 1300560 29 100.0 32 ............................. ATAGTCAAGACCGGAGAGGACGTGATGGATGC 1300621 29 100.0 32 ............................. ATCAGACTCGCGACAAGCCGCAGCCTGAGCAG 1300682 29 100.0 33 ............................. TGCAATTAGATCGCCGCGAGATAATCGCAAGAA 1300744 29 100.0 32 ............................. ATATTCAAAACGCCATCCATAATTCCGGTCAC 1300805 29 100.0 32 ............................. ACATGATTGAGAGCTTCATCATGTGGGTGGTG 1300866 29 100.0 33 ............................. GTCTTCGGTCGAGAGTCCGACCTTTTCCAATGC 1300928 29 100.0 32 ............................. GCGATCAGGATTGGGCCTTGCTGCTCAAGCTC 1300989 29 100.0 32 ............................. CAGATGATGCGCTTCGACGTGCTGCCTGTGTT 1301050 29 100.0 32 ............................. TTAACGCGGCAAATCAAAGCGCAGCTCTTAGT 1301111 29 100.0 33 ............................. GAGTACAACCGCGAGCAGATGCTATTGGCCGGC 1301173 29 100.0 32 ............................. GGGGCATACAGCGCCCTGCGGGCCAGCTCGAA 1301234 29 100.0 33 ............................. GTTGATGTGTGCTGTGACGGCGCCGACCTTGGC 1301296 29 100.0 32 ............................. GTCTCAACTGACGCGATATTTTTGCGAGCTGC 1301357 29 100.0 32 ............................. CGGATCACCTCGACCGCCCCACCCTCGAAGAG 1301418 29 100.0 32 ............................. CGCGACGTGGTGGAGGCCATCCGTGGCGTGGA 1301479 29 100.0 32 ............................. ATTATCCGCGAGCAGGGTCAAGACCCGCAAAC 1301540 29 100.0 32 ............................. CCGCCCGGCACCCGATGCCGCCCGACATGCAT 1301601 29 100.0 32 ............................. ATTGACCCCTCAGTGGTGCTGGCAACCCGCAA 1301662 29 100.0 33 ............................. GCGGCCTGATGATGCACGACAGGCAATTGGGAC 1301724 29 100.0 32 ............................. ATCGTCATTCCACTCGGGGTCGAGCTGGATAT 1301785 29 100.0 32 ............................. GAAGGTTTCAGACATTTGCTGGGCCTCGATGG 1301846 29 100.0 32 ............................. TCAGTGAGGATTTCATCATCCTGCTGATGGGC 1301907 29 100.0 32 ............................. TCGATGGCCACACGGCTCGGGCGTTGCCCCTT 1301968 29 100.0 33 ............................. ATGACAGTGCGCGAGATGCGCGATCTAATCGAG 1302030 29 100.0 31 ............................. TAATGAGGCGCTCAAGATTGTTTCAAAGTCC 1302090 29 100.0 32 ............................. CCACGGCGGCCACACTCTTCGAGATCCACGAT 1302151 29 100.0 32 ............................. GTTGTTGGTTACGTCAGGCAGGCCATCTGCCG 1302212 29 100.0 32 ............................. TTCCCGGTCTATCAGTCGGTCGGCAGCTTTAC 1302273 29 100.0 32 ............................. TGTGATCGGATGATATCCACTGCGTCCAGCAT 1302334 29 100.0 32 ............................. TATCGAGCATTGACTATGACAAGCGGGGCTGC 1302395 29 100.0 32 ............................. AGCGAGCTTGCCGGGTCTTTCGTTGAGTCGCT 1302456 29 100.0 32 ............................. TAGCGGCTGCACTTGGCTGTGAGCGGCTCGGC 1302517 29 100.0 32 ............................. CACACTGGAAACACCAGAGTCAATGTTATCAT 1302578 29 96.6 32 ................T............ GACCACGGTGCCATCGTAGTGGCTAAGGCTGC 1302639 29 96.6 32 ................T............ GTGGGAGATCCCGTGGTGGCACCACACCTTTG 1302700 29 96.6 32 ................T............ GGAAGGGTGGCAAGAAGGCCAAGAACGAGATC 1302761 29 96.6 32 ................T............ TCCATGGAGGCACTCAGAATGGCCGCCATTGA 1302822 29 96.6 32 ................T............ GGGGGTGTTACAGCGGAAAGGCCCGCCGCTGA 1302883 29 100.0 32 ............................. AGTCTGGCGAGTTTTCATTTGTGCTGTTCAAG 1302944 29 100.0 32 ............................. TCCGTAACATCCAGCTCGCCGCCTATGACTGC 1303005 29 96.6 32 ................T............ TTAACCAGGTCATCAACCTGTTCGTCAGCAAA 1303066 29 96.6 32 ................T............ ACCAACATCAGCAAGGCCAACGTCTGCCTTTA 1303127 29 93.1 32 ................T...........T TGGAAGGGCCTGACCGGCAACGATATCGACCT 1303188 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================= ================== 59 29 99.4 32 CTGCTCCCCGCGCACGCGGGGATGAACCG # Left flank : CCGCTAATTGAAGAGGTGCTTGCTGCAGGGGGGATCACCCCGCCTGAGCCTCCTAAGGATGCTCAGCCGCCCGCCATTCCCGAACCGATCGGCATGGGGGACGCCGGTCACAGGAGTCAGTGATGAGCATGTTGGTCGTCGTGACCGAAGATGTGCCCCCACGTTTGCGTGGTCGGCTTGCTATCTGGTTGCTGGAGGTCCGTGCAGGTGTGTATGTGGGAGATGTCTCGCGCCGTGCACGAGAGATGATCTGGCAGCAGTGTGAGGCATTGGTTGAGCAGGGCAATATCGTGATGGCCTGGCCCGCCAACAACGACTCTGGCTTTGACTTTCAAACCCTGGGTGCCAACCGTAGGGTGCCGGTGGAGCTGGATGGCTGCCGGCTTGTCTCTTTTCTGCCTGTTAAAAATCAATAAGTTACAGCTCATTAACAATCTGGATAAGTTGGTGGCTTTTTTATGGTTTGAAAAAGCCATTTAAATCAATAATATCCATTAAGT # Right flank : GTATGTAGATGTTGAGCTTTATCCCGCGCGGCGCCGTTCCCCACGCTCGTTGGGATGGAGACCAGCTACAGTCACAACTCTAAGTACTCAAATGTCTACCAGCTAATCAATGATGGCCACAGCGCGGAGGACGCATCCCGAATGCTTGGCCTACCGCTGCGAACGGTGAATCACATCCTGGGGATCGAGGAATAAACAAAGGGGCTCACGGCCCCTTTGTTATTGGTTCATCCAGTGTAACCACTATCTCGACAGACTCACCGAAGTGAAGGCGGGCGAGTCTGATTAGTTCTGCCACATCTGGGTAGTTGTCACGGACGTACTGACGCCGTTCTTCCAGTGACATTTCAGCGGACACGCGGCCCCCCTTTTGTCCAATTCACTTCGCCTTGGGCCTCTGTATCTCTTGAGGATTTTAGGTCTCTCAAAATCAAGAGGAAGCCAAGACTCCTTAGAACGCCTGCCTGACTTAGTGAAGTTTAGTCACGACCTTACGGAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //