Array 1 306666-307540 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJNAP010000001.1 Nitrosomonas nitrosa isolate Nitrosomonas nitrosa 18-3D, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 306666 36 100.0 34 .................................... AAGCGCTTTGATTCGTTTTACCGGAGGGACTTGC 306736 36 100.0 34 .................................... GCATCATTTTTTACTGCTTCTGCCTCAAAACAAC 306806 36 100.0 34 .................................... AGTCCGGTGAGCGCGTAATTAAACTCAAGTCTTC 306876 36 100.0 35 .................................... TTGTTTTTGTGGGCAATTTATTGACAAGAGAGCAA 306947 36 100.0 34 .................................... AGAGTACGGAGTTATCTCTTTTGCAGATATTAAG 307017 36 100.0 33 .................................... ATTCATCTTGCATGAGTTTGAAAGTATTGGTGA 307086 36 100.0 34 .................................... CAAGATAAATAACCCTATCAAAACAAGCGATGTG 307156 36 100.0 33 .................................... GCCGCGTTTATAGCATCGTTTAATTTTGAGTCG 307225 36 100.0 34 .................................... GTATAAAAGGTGGTATTTTTCGCTATACCTACAT 307295 36 100.0 35 .................................... TCTGTAATGAGTTGGTTTAGCGTATCAATTGCGGC 307366 36 100.0 33 .................................... GCCTGATCCATGGTTATTCCTTCCAAGAAAATA 307435 36 100.0 34 .................................... GTAATAAATTCCTTCGCATTCTTGTCCAGCCACT 307505 36 94.4 0 ..................................TA | ========== ====== ====== ====== ==================================== =================================== ================== 13 36 99.6 34 GTAGACATACAGCCCTGATTTAAAAGGGATTGAGAC # Left flank : GCACGCCCTCAGAGCGGATCACACTACAATTCGATACCCCACTCAGACTACAACAGGATGGACACGCCTTGCCGCCTTCCAAGCTCACTGCGCGCACCCTGCTGATGGCGTTGGTTCGGCGAGCCAGCTTGCTCGCTGAAATTCATGGCGGCAAACGACTCTATAGTACAGAAGAATTTTCTGAATTGGCTGAGCATGCCCAACAAATTACAAGCCATCATCATCTTACTTGGCGCGACTGGACACGACATTCATCTCGCCAGCGACGTACCATGCAATTGGGCGGATGTATCGGCAAATGGCAGTTGAGTGGCAATCTAACTCCATTCCAGTCATTGCTACGGCTAGGATCATGGCTGCATGTCGGCAAAGAAGCCAGTTTCGGTCTTGGTAAATATCGCATTATCGAGGAATAAAAACCCTATGTTTGTACATACCCTCAAAACTCGCGAACTCACTCGGCAACCAATTGAATGTGATATAAAAAATGGGAATGGTGA # Right flank : AATTTATCAGAGTTAGCACTACTGATATTTGGCAAGCTTGCCAGCCAAGTTGGCTCTCTTGCTTTCACTTATACTCTTGATCATTCCAAAACAGAAGGTAGTCAAACGCTTCTTGTAAAACCGATTCGATATCAGGTTGAATGAACAGAGAACAATGCCCATGAATTCACGTTCAATTTATTTAATTTGCTATGACGTATGTTGCCCACGGCGGCTAAGACAAGTTCATCAGTTTTTGTTGGGCTATAAAACGGGGGGGCAAAAGTCTTTTTTTGAATGTTGGTTAACCCCACGGGAGCTGCGTGACGTCAGAATGCGTCTGATTGAACTGATCGATCCTGTCGAAGATCGTGTGCATATCTTCCAGCTCGATCCGCGCATGACACCGGTTTGCTATGGTGTTGCCGTTACCCGAGCAATCAATACACCATTTATCGTTACTTAGGAGGTAATTTTGACGAGTCTTTACGTTGATAGACGAGGTGTCGAATTGGAAGTGG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGACATACAGCCCTGATTTAAAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 240874-250868 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJNAP010000012.1 Nitrosomonas nitrosa isolate Nitrosomonas nitrosa 18-3D, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 240874 28 100.0 32 ............................ AACTACGCAACCAACCAAGTTACGCCGGGCGG 240934 28 100.0 32 ............................ TTGCTTCCTACTACCATCTTCCTTGTTCTCAT 240994 28 100.0 32 ............................ TGACGGTGATTTTTCAGGCTATTGCCGACGAA 241054 28 100.0 33 ............................ TGGATGCTCTGGCCAAATCCTCAGCGTATTCGT 241115 28 100.0 32 ............................ GCTCGGTCTGGATTTTGTTTCCGCATTGAATC 241175 28 100.0 32 ............................ TAGTGACTGAATCGTTTTAAGCGCCGCCGCCT 241235 28 100.0 32 ............................ CCAGTACATATCGCCAGCCGCATTCGTTCCGC 241295 28 100.0 32 ............................ TGACGGCATCCAGGTTTCAGGGGTGCAAGCTC 241355 28 100.0 32 ............................ CGATGCCGATTGTTGGCTCACCGCCAGAATCA 241415 28 100.0 32 ............................ GATAGGCTGGCTGCTTTTGTTTTCCGCCTCCT 241475 28 100.0 32 ............................ AGACGATATTAATCGATGCGGTGCCAGGCGAG 241535 28 100.0 32 ............................ TCGGGCACTGATTCATTTATCGAGGTTTCGAG 241595 28 100.0 32 ............................ TCGGACTCTTTTGCCGCAGCCGCCTCGGCCTC 241655 28 100.0 32 ............................ ACATGCCAACGACAATGCTCTTACCTGTTTGA 241715 28 100.0 32 ............................ ATTTGACCCTATCTGCATCCTCGGTACTGGAT 241775 28 100.0 32 ............................ TGGTGATTATTTACTGCTGCGTGCTGGTGTGG 241835 28 100.0 32 ............................ ATGACATCGGGCGCTTATCGTCGCCAGGATGT 241895 28 100.0 32 ............................ ATCGCGATGCTCATCAATGCGGTTGCTGCGGG 241955 28 100.0 32 ............................ GCCACACTCTCACTGATGTGGCATCGTTAATA 242015 28 100.0 32 ............................ CAGAGCAGAATCATTGCAGCGCAAAAAGCCAA 242075 28 100.0 32 ............................ TGATATCGATAGTTCTGCAGGCGTGGCGTTGA 242135 28 100.0 32 ............................ AATCGCCATTTGGCAACGTCAAATCGCTACTA 242195 28 100.0 32 ............................ GGCCAAACTGCAAATATTATCCAGTCGCACCA 242255 28 100.0 32 ............................ GATTTGTGGGCGTGATGGTTATTTCTCCCATG 242315 28 100.0 32 ............................ AGGGCAAATCGATATAACTGGTCAGCAATCCC 242375 28 100.0 32 ............................ AGTGCCAGAGGCGGGTGAGCTTGTTGCCGATG 242435 28 100.0 32 ............................ TCGACTCCGGCGGCGAGCCTACTATCGGCATC 242495 28 100.0 32 ............................ TGGTATCGTGTCGATGTTGATACCGACGCTCA 242555 28 100.0 32 ............................ GCTTCTAGTAGGGTAACGGTCATCTCTTGGAT 242615 28 100.0 32 ............................ ATACTTGACAGGAATCCGGTGTGTAGTTGTCG 242675 28 100.0 32 ............................ GCTGCATGACGCCGTTGAACGTCAGAAAGCAC 242735 28 100.0 32 ............................ TCAATTGTGATACCCGCAGCAACCGCATTGAT 242795 28 100.0 32 ............................ TCTTGCGCCATAATTCCTTTTCTTCGCGGCTT 242855 28 100.0 32 ............................ ATTTATCGGCAACGCGTCTCACTTGATTGCGA 242915 28 100.0 32 ............................ TGAGTCGAGATAGACGCGCGTGCGCAGCCCTT 242975 28 100.0 32 ............................ GAGATGTACTGGCGGGATGTCGATGGCGTGCC 243035 28 100.0 32 ............................ AGAATACACGAGAGTGAAAATGATCAATACGG 243095 28 100.0 32 ............................ CTGCACCAATGGCGACACTGCTCGAGCTGGTC 243155 28 100.0 32 ............................ TAGAGGAAGTGTTCGGCGATAGCCCTTCTGCT 243215 28 100.0 32 ............................ AACGACGCCGGGTAATCCGTGGGCAGAATTCA 243275 28 100.0 32 ............................ ACGGTTGTTCAAGGAACGGAACGGAATCGCCC 243335 28 100.0 32 ............................ TAATGCATCTTCTAATTCTCTTTCAGATAGAT 243395 28 100.0 32 ............................ GCCAATTTAATAGCTTGCGCATTGGCCTTAGC 243455 28 100.0 32 ............................ CCATCTACAGTTATTCGGTACTTTGTTCCATT 243515 28 100.0 32 ............................ TCAACTAATAATCGATTTGACGCAAGATCAGT 243575 28 100.0 32 ............................ ATGAGCGCAAAAAAAATAATCAACGAATTCGC 243635 28 100.0 32 ............................ ATCTCATCGGATATCGCCGCGATCTCCTCCGC 243695 28 100.0 32 ............................ TACAGGCATAGTAGGCAAATCATATTTGGCAC 243755 28 100.0 32 ............................ ACTCAGGCGCTTCGCCGGAGTAAGCGATATCA 243815 28 100.0 32 ............................ CAGCTCAAAGTCCATCGCTGCGCGCATAGACG 243875 28 100.0 32 ............................ AGTACCGCCTGTTTATACAACTCCGGTTTGTG 243935 28 100.0 32 ............................ GCAAAGTATTGAGCATGCCTTTCGCACAGGCA 243995 28 100.0 32 ............................ ACGTGCCGCTATTCGGCGTAGATGAACACTGG 244055 28 100.0 32 ............................ AGTACGGCTATTACCCGTTTGCATAATTCAGG 244115 28 100.0 32 ............................ TCGTGGCAAACGACGGCGAGCGCGTGGGTTCT 244175 28 100.0 32 ............................ TATATCTATTGGCCGGGGTGCATAGGGAGAAT 244235 28 100.0 32 ............................ TCTGGCGTCCTGCAACATACGCTCGATTAGCG 244295 28 100.0 32 ............................ CATACCCGCCAGGGAGTTGGCTAAGGCAGCCA 244355 28 100.0 32 ............................ ATTGTACCACACCGTCCATTCTATGGGTTCGC 244415 28 100.0 32 ............................ ATAAAAGCAAGCGCGAAATGACTACCTGATCC 244475 28 100.0 32 ............................ AAAAGATACCATCGGAATCAATAGAAGATCGA 244535 28 100.0 32 ............................ TATTGCTAAGCGGCTATGGTTTGGTTATTTAT 244595 28 100.0 32 ............................ TATTAGAAGTTCCAACCTTTTCAACATCTTCA 244655 28 100.0 32 ............................ AAAGCTTCTTGCGCTGCTACAGGTAGCTCTAC 244715 28 100.0 32 ............................ AATCTAATTGAGATTTGTAGTTTTTAAAGCAA 244775 28 100.0 32 ............................ TTCCATTCCCTTCCCTTCCGGGGGCGAATAAT 244835 28 100.0 32 ............................ AATTGAAGTTGTGCCTTTTGAAGGTTGCTTCT 244895 28 100.0 32 ............................ CGGGTGCTTTCTCAGAAGATGCTAGAGGAAGA 244955 28 100.0 32 ............................ TATTGTTAAGCGGCTATGGTTTGACTACTCTT 245015 28 100.0 32 ............................ GCCCTCATACCGACCGGGCTTGAATGATTCGT 245075 28 100.0 32 ............................ ACATGCGCCAGCAATGGCGAGGATTGAAAAGA 245135 28 100.0 32 ............................ TTGATCGATAATCAAGCCAAGGCCGCCTATTG 245195 28 100.0 32 ............................ ACGAAGGCATGCAGCCTCGTCCAAGCTCGCTA 245255 28 100.0 32 ............................ ATTTTGTTGCTATCTCGTAACATTTATCAATT 245315 28 100.0 32 ............................ TATCTCTGTTTCTCATGTCATAACATGGCAGA 245375 28 100.0 32 ............................ GTTAAAGGACGGTGAATATCTTGCTGATTCTC 245435 28 100.0 32 ............................ AACGTGAACGGCTGTACTGTTCTTTTGTTTTG 245495 28 100.0 32 ............................ GCTGGCCCGCATCTAGCATCCATATTTGGCCC 245555 28 100.0 32 ............................ GATAACCGGGCTAGAGATCGACTACGGCGCGG 245615 28 100.0 32 ............................ AAAGGCCGATCGATTGATGAAAACATTCCAGG 245675 28 100.0 32 ............................ CGACCAACTTAATTCACGAGACATGATACTCG 245735 28 100.0 34 ............................ CGTTTCCATTTTGTTGCTCAGAATAGCGATATTT 245797 28 100.0 32 ............................ AGAATATCGTCGCGCAGTACCACAACGTCAAC 245857 28 100.0 32 ............................ AAATGCGTCTTGCGTTCAGCATAACTACCTCG 245917 28 100.0 32 ............................ GTATGCAGCTATCCAACCTGGCGATATCCTAG 245977 28 100.0 32 ............................ AAGCGGCTGATTATGTTGGGAGGGCTAATGAT 246037 28 100.0 32 ............................ AAGGGGCTTTTTAAGCCCTCGTAAAGGTACGA 246097 28 100.0 32 ............................ GCTTGAGAAAATCTTCGCAGCAATTCCGGCCT 246157 28 100.0 31 ............................ CCCAACATAATCAGCCGCTTGGGCAGCCTCA 246216 28 100.0 33 ............................ CTCCTGAATTTTTAAATTTTTCATTTCCTCACC 246277 28 100.0 32 ............................ CTCCAGAAAATCCAGATGACTGTCCGCCAGGT 246337 28 100.0 32 ............................ TATATGTTCCGCCCGCATTTCTGAGTATCGCG 246397 28 100.0 32 ............................ AGAATCAGATTGTCCGGCCGCAGGAACCCAAG 246457 28 100.0 32 ............................ CTTAGAAAATGCAGCGCGTTCGATCGTCCAGG 246517 28 100.0 32 ............................ ACAGCAGGGCGCGAAATCGCAAACATTCAAAG 246577 28 100.0 32 ............................ AACATTAACTCTTGTACTTTACCTATCTGCCT 246637 28 100.0 32 ............................ GATATCCCACTTGGGAAGCTTGCCGAACTTAG 246697 28 100.0 32 ............................ TGGAACCGGCGACCAATGGGTAAGAAATGTTT 246757 28 100.0 32 ............................ ATAATCGGTGATTTTTTAAATCCCAATAATCG 246817 28 100.0 32 ............................ TTTTGCCGACGCTGGCAGAATCGCCACCATGA 246877 28 100.0 32 ............................ GATCAGAAAAAAAGCTCGTGAATTATTAGGGT 246937 28 100.0 32 ............................ TTCGTCGGTATAAGACGCTGTCGTATCGGTCG 246997 28 100.0 32 ............................ ATCAATAGAAAATCCTATGTCTCCGCCCGATA 247057 28 100.0 32 ............................ ATCGGAAGTGGCAAAGAAAGAGCTTGCGAAGT 247117 28 100.0 32 ............................ AATCGTTGGAAAAAATGAACGAATGGAAACAA 247177 28 100.0 32 ............................ ATGAGCCAAAAAAATTAACATGATTTTGGGGT 247237 28 100.0 32 ............................ CAGGTGCGGCAGTGATTAAGGTAAGGCTCATT 247297 28 100.0 32 ............................ ATTGTGGAACATTAGAAGGAGATCCCGATTCA 247357 28 100.0 32 ............................ AAATTTTTACGCGATGAATTCAATCGCCTGGG 247417 28 100.0 32 ............................ TCTAGCGTTCCCATCTTGATTTATAGCAGCGG 247477 28 100.0 32 ............................ TGAGAGCTTCTTCCATCGAACCCCGCTCCAGT 247537 28 100.0 32 ............................ ACAGGCCGTAGTTGCATAGCCGCATCGCAAGC 247597 28 100.0 32 ............................ AATCCTGCGACTTTAGAATACCAGGTGCATAA 247657 28 100.0 32 ............................ GTTCGCTTCTTGCTCGTCTATCCAGTCGGCTA 247717 28 100.0 32 ............................ ATGCGCAAATCATCATCAAATGCATGTCTTAA 247777 28 100.0 32 ............................ GTCAGAGTTGATTGTCGTCGTCGTCGTTTTAG 247837 28 100.0 32 ............................ GATCACCGGAGCAGCAGTAAGTTACGGTATAC 247897 28 100.0 32 ............................ GCGACACTAAACGCTCTTGATCGTCTCCATCT 247957 28 100.0 32 ............................ ATCTACCCGGCCATCTTCAGGTTGTGTACCGA 248017 28 100.0 32 ............................ GTCCATTCTATTGGTTCGCCTAGTTCGCCGTC 248077 28 100.0 32 ............................ TCCGCGTAGGTCATACTATCAGGCGTCATACG 248137 28 100.0 32 ............................ TTTGCTGTGGCTATGGCGCCGTCAACTAGGTC 248197 28 100.0 32 ............................ GAACAAGATAGCTGGTAATATCGCTGCGCCCT 248257 28 100.0 32 ............................ TCGTCGGCAGCGGCCTGGATGGCGCGATCATC 248317 28 100.0 32 ............................ CAAATGTATAATATAGTGTCCAATCGTATTCC 248377 28 100.0 32 ............................ AACCCAGGGCAGGTATTTTGGGCTGGCGAGAA 248437 28 100.0 32 ............................ ATTGTCGGCATCACGGAACGCTTGCAACTTCC 248497 28 100.0 32 ............................ TAGCACTTCGCGTATGAACTCGTCACCATTCT 248557 28 100.0 32 ............................ TACGTATTTTAGGATTCTCCCTGTGCACCCCG 248617 28 100.0 32 ............................ TTAGTTCGGTGCTGTAATAGTTTCTTACCCTT 248677 28 100.0 32 ............................ TCGCCTAGTCGCTCGTCGTATTCACGATCCAC 248737 28 100.0 32 ............................ AGTAGAAGCGCTTGTTTATGAATCGCCAGTAT 248797 28 100.0 32 ............................ TGTTCAATTGCCAAGGGACATATCGATTGATT 248857 28 100.0 32 ............................ GTTGTCGCGCACTTCGATCAGCCGCTCGATCT 248917 28 100.0 32 ............................ TAAAGTTCAGGCGGCGCGCGATGATAGCATCA 248977 28 100.0 32 ............................ CGCACCGGAAAAAGAACATAGTGTAGTCAGCG 249037 28 100.0 32 ............................ TATGAGGCGTACGCGTGTTCTTATTGGGTATT 249097 28 100.0 32 ............................ ACTTCCACCTATAACATAATCACCTTTTCTTA 249157 28 100.0 32 ............................ ACCCAAATCAGGCATGCCTCCGCCCACCACGT 249217 28 100.0 32 ............................ AAAAAGTCCGACTGTCCTACAAACTCCGTGCC 249277 28 100.0 32 ............................ TACCATCCAGCGGACAATATCTTTTTGGTGTG 249337 28 100.0 32 ............................ TTCTTTTCGGAAGGGAAAAGAAAACGGTCTTG 249397 28 100.0 32 ............................ AGTAAATCGATAAGAAAAATATGACTGATTAT 249457 28 100.0 32 ............................ GACCGAGGATGATCTAATCGTCAAGGCACATG 249517 28 100.0 32 ............................ ACGCGAATACCGCGTGCGATAGCATCCGTAAT 249577 28 100.0 32 ............................ AGTGGGGAGCGTTACATAAACGATTTCAAACG 249637 28 100.0 33 ............................ AAAACGCAAGATCGCTCGACGCAAAGGGTAGGT 249698 28 100.0 32 ............................ GATGAGAAGAGCTTTAAAAAATGGTTTAAATC 249758 28 100.0 32 ............................ ATTTTATGGCGCGCGCCCTGGAGTACCTTGTT 249818 28 100.0 32 ............................ GCCATCAGATAAAGCCTCCCGGGTCGCGTTTG 249878 28 100.0 32 ............................ ATTAAAAGAATATGGCGTTTCCTACATGACCT 249938 28 100.0 32 ............................ CATAAGCCGCCTCGGTCAACTCATACACCTCA 249998 28 100.0 33 ............................ CAGATGACCGAATTATCGCAATCAACCGCGACA 250059 28 100.0 32 ............................ TTGACAAGTACGAGAGCGAGAATAGCCTGTTA 250119 28 100.0 32 ............................ TCCAATAAAGCGCAAAGTGATATTAAAGCAGC 250179 28 100.0 32 ............................ ACAAATAATTTCGGTTTTTACTCAAATATTCC 250239 28 100.0 32 ............................ AGCGCGTCACCGTATTAACTCAAACAAGATTC 250299 28 100.0 32 ............................ GCTAATATCACACTCGCATAACCACGGAGACA 250359 28 100.0 32 ............................ GATGTTATCCCTGCTTTCATTCTACTTCTCCT 250419 28 100.0 33 ............................ CAGTACCCATACCTGAAGTACCCGCAGCATATC 250480 28 100.0 32 ............................ GCTGCAATTTATCACGCAGCTTAAGATTAAGC 250540 28 100.0 32 ............................ GTCTGAACAGGGCTCTATTTTCAAACTGATCA 250600 28 100.0 32 ............................ TCATAATTCTGTGATGGTGTTGGGATGAATTT 250660 28 100.0 32 ............................ TTTGCCATTTTGTCACGCTGTTCTGCGTCACG 250720 28 100.0 33 ............................ AGCCGTGACGATGTAAAAAGAGCGACACGCAAG 250781 28 100.0 32 ............................ AGTGGCCTGGTCGGGGTGGCGACATTCATGAT 250841 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 167 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTTAGAAA # Left flank : TTGAAACCGTTTTTTCGCATCCTTCTAAAATCGATTTTGTCGCCAATGCAAAAGCGCTGGGTTACGAAATTGTGCTGGTCTTTATTCACCTTGAACAGACACAACTCAATCTCGCGCGTATAGCGCAGCGGATGAGCGAAGGCGGCCACGCTGTGCCGGATGAAAAAGTTAAGGCGCGAATCCCCAGAACATTGCAATTGGTTAAACAGACTTTGCCATTATGTGATCAAGCATACATCCTGGACAACGCTTGGGCGGATAGCCCGTTTCAGCAAATAGCGGTAATACGCAATGGGTGCCTTGAATTAAAACAAGCAACTGTTCCAGAGTGGTGCCAGGAACTGCTATCGGATTATTTGTAAGTTTTATACCCATTTTTTTTCGCTCTTTAACAATACATACAAAATCAGTTACTTATTGATGCTGGAAAAATATTGGGATTTTTGCTTGGTTTCATATTAAACGATTGCTGCTTATAGTTCTTTGGATGCTATACTTCG # Right flank : AAAGGCAGAGCAAGAAAAACTGCTCGCCGCATTACGCGCCATGCAGCGCGATTCCGCCACAGTCATCCCGCAAGGCATGGAAGTGGCGCTGGTGGAAGCGCTGCGCAGCTCGGCTGCCGATCATAAAACGTTTGTCGAGAACATGAACGAAGGCATTTTATTGGTTTGCCTGGGGCAAAGCGGCACGGTCAAAGGTACGCTAGGGAAACTGGGTGGAGAAGCTGAACGGGAAAACGTCAAGGACGCCATCCTCAAGGCTGACTCGGATCTGTTATCCGAGAGACTGAACCGCACCCTCGTGAAGTGGCTGGTGGAATGGAATTTCCCGGGCGCTGTACCGCCCCGGGTTTATCGGGTATTCAACGATGAAGACCTGGATGCGCATGTGGCGCGCGACAAGACGATCTCGGAGATGGGCTACAAACCCACCTTGAAATACATCACCGACAAATACGGCGGGGAGTGGGAAGAGCGCCAGCAGGCCGAACCCCCCGCTGAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //