Array 1 1-351 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDRU010000002.1 Pectobacterium versatile strain CFBP5378 Pectobacterium_versatile_CFBP5378_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =============================================================== ================== 1 19 60.7 32 ---------..T.T.............. ACATCAGATCAACCGGCTCGATACCACGCCAT 52 28 100.0 32 ............................ AGTCCGATCTTCATCACAGCTGACGCCTCTTG 112 28 92.9 32 ...T.......T................ AGAAGCTATCGCGGCGCGAAACGAAGCGCTTT 172 28 96.4 63 .............T.............. NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 263 28 64.3 33 NNNNNNNN...T.T.............. AATTGCTATTAGCTGGCGGATTGCTGGCATCAG 324 28 85.7 0 ....................T...TCC. | ========== ====== ====== ====== ============================ =============================================================== ================== 6 28 83.3 39 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : | # Right flank : ACGGCCTCAAGCGCTGTTGTCTGGCTATTATCGAGGTAGTACTGCGCCAGCGCTCACCCCCTTAAATAACGCATATTGATGACCTTATTTCGTAACGTTTTTAAGTAATAAGTTTCTTTTTAAGGGAATGCAAATTGTGTATTGGGTATTATTAATATTTAAAAATCATCATTTTTCCGTTAAAGTACCCTTACAGGGAAATAGTTCGTTGACTTAAGTCAAATTCAAGGGAGTGAGTGACTGTGAAATACGATCCGGTTTTAAAAACGCTTGTGGATGATGACTATCGGTTAGAAGATCATCTTGATTTTAAAAAGCAGCATGCAGATATTAACTATCAGAAATTACACGCACAACTAAATGAAATAAATAACGATAACATTCATGCCATATTGACTGCGCAGGAAGCGACGTATTTTTTAAAGACGTTATGTACACCAAACCCTAACGAATCGTGGAAAACGGCGATATTTGGCTGTACCGATCCTACTTCATCGTTT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.16, 5:-1.5, 6:0.25, 7:-0.36, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.17%AT] # Reference repeat match prediction: F [matched GTTCCCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8972-9958 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDRU010000008.1 Pectobacterium versatile strain CFBP5378 Pectobacterium_versatile_CFBP5378_contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8972 28 100.0 32 ............................ AAAGAAGAAGCAGCACATGCATATGATAAAGC 9032 28 100.0 32 ............................ GGATGTTCGGAGAGCCGACGCCCGCAGCGCAA 9092 28 100.0 32 ............................ TTCAGCCGACACATCTCCCGCCACCCAGCCAT 9152 28 100.0 32 ............................ GCAGGATGGCGACGTGGTGATCACCTGGCGCA 9212 28 100.0 32 ............................ TCACCCAGCAGCGCATCCAGATCGCTTTGGGT 9272 28 100.0 32 ............................ ATTTAGCGAACTTCTCGCCAATCTCGATCACG 9332 28 100.0 32 ............................ TGATTAGTACGATAAACGGCAATCCATCCCGT 9392 28 100.0 32 ............................ ATAGTGGCGATTTCTGAAATTAAAAGAAAATA 9452 28 100.0 32 ............................ TATACAGACACGACAGCGGCCAACACGCTGAG 9512 28 100.0 32 ............................ TGCTACGTATCAGGATAGGACGATACCAACAC 9572 28 100.0 32 ............................ AGTAAGCGCGCGCGGGCGTTGCATGTACTGAG 9632 28 100.0 32 ............................ GTTTAATGGGTTTGTGAATTGCGTTCCTGCAC 9692 28 85.7 32 .......A.T.T.....T.......... ATGACTGATCATGCGCTGGCTGGGGTATGGGG 9752 28 92.9 32 .G.........T................ CCCGATGCACAGATGTCTGCTGAGACACAGGA 9812 28 82.1 32 T.......T.T..CG............. GTTTTGGCTTAGTTATCATCCTGATAAGTTTG 9872 28 96.4 32 .............C.............. GCAATTGCTGAAATCGATGCACAAGCGGCTGT 9932 27 82.1 0 ...........T.C.......-....TG | ========== ====== ====== ====== ============================ ================================ ================== 17 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AAGCGCTCTCTACACTGGAGCAAACGGCCTGGCTGAAAGGATTGCGGGATTACACGCAGGTTTCTGCGTGTACAGCCGTACCTAACGGTGTGAAATTTCGCACCGTGCGCCGCGTTCAGCTCAAGAGCAGCGCCGAACGGTTGCGCCGACGCTCGGTCAGCAAAGGCTGGCTAACGGAAGCGGAAGCCGCAGCACGTATCCCCGATGCCGTGGAAAAACGCAGCGCACTGCCATTTGTGCAAATCAAAAGCTTGTCCAACGGGCAGCTGTTTTTCGTGTTTGTGGAACATGGCCCGCTACAGGACGCCCCTGTCGCTGGCCGCTTCTCTTCCTACGGTTTAAGCGCAGAAGCCACCGTTCCGTGGTTCTAACCCTTTTTTAGCGGCCAACTGCAAGCTATTGATTTTTAATTGCAGTTGGTCGCCCTAATAAAAAAGGGTTTTTCGCCCAAAAAGTCATATTCTCTTTAACAATCTGGTGGTTAGCGTAAAATCTTAACG # Right flank : GCTTATCGGGATGCGTCGCTGGCGCGACACATTTCGTGGCGTTATTCCCCGTTGAGCGTGACAACCAGCGAGCGGCTGCCGCCGTGGTTGCGGTGTTCGCACAGGTAGATGCCCTGCCAGGTGCCGATGTTCAGGCGTCCGTTGGTGATGGGGATCGTCAGGCTGTTTCCCAGCAAGCTGCCTTTCAGGTGCGCGGGCATGTCGTCGCTACCTTCATACGTATGGCGGTAGTACGGTTCATCCTCCAGCACTAAGCGATTAAAGAAACTCTCGAAATCCTGCCGCACCGTAGGGTCGGCATTCTCGTTAATCGTCAGCGCTGCCGAGGTGTGCTTGATGAATACCTGCATCAACCCGACTTTTATCTGACGCAGTGCGGTGACCTGTGCCAGTATTTCGTCGGTCACCAGATGGAAGCCTCTGCTTTTCGGCTTCAGGCGGATTTCATATTGCGTCCACATCGGCGTCTCCTGCTATCAGGCTTCACGCGCCAGAATCGG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 57210-58276 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDRU010000010.1 Pectobacterium versatile strain CFBP5378 Pectobacterium_versatile_CFBP5378_contig_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 57210 29 100.0 32 ............................. CCGACGTAGACACTATCGAAGAAATCGCTAAC 57271 29 100.0 32 ............................. GAAGAGGCGGGGACAACAAACGTTACGTTCTT 57332 29 100.0 32 ............................. CGATTGACGCACGCATGGCGAAGGCAGATGCA 57393 29 100.0 33 ............................. TTCGGTTAATCAGTACGCATAACGGCACCGAAA 57455 29 100.0 32 ............................. GTTATTCGCGCCTTCTCCAGTCGCGTGGCCGA 57516 29 100.0 32 ............................. AGGCCATGTTGGATTACGTGGCCGCTCAGAAA 57577 29 100.0 32 ............................. GCAAATCGTCTTTTTGTGCGATCCCCGCTGCC 57638 29 100.0 32 ............................. GAAATGAAAAAACCACAGCGAGACATGACACC 57699 29 100.0 32 ............................. GTTGCCGAGAAGGCGATCAGTACATTCCTGTC 57760 29 100.0 32 ............................. GGATCGATCCTTAAATTGCCGTACATGTTTAT 57821 29 100.0 32 ............................. ACTTTGTTATTCTCCGCCTTACTCAGTTTCTC 57882 29 100.0 32 ............................. GCCTTTCGGTTGTACCGGTGTACCAGCCCCAG 57943 29 100.0 32 ............................. TTCCTGCGTTGGTTCGTACGGGCGGCACTGAG 58004 29 100.0 32 ............................. CATTTATTGATGCAATGCGAATAAAGTCCGGC 58065 29 100.0 32 ............................. CGTTATAGGCAGGCTCAAGAAACCCGATAGCG 58126 29 100.0 32 ............................. CACAAAAACGCTGATGGAACCTACAACGGCGT 58187 29 89.7 32 ........T....T..............T AACAATGCCGGAACTGAAACCAGACCGCGCAA 58248 29 89.7 0 ............T............G.T. | ========== ====== ====== ====== ============================= ================================= ================== 18 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGATTGAGGACGTCTTGTCTGCGGGTGGCATTACGCCGCCGCTACCACCGGACGATGCACAGCCGCCTGCAATCCCAGAACCGAAACCGTTTGGTGACAGCGGCCACCGGGGGCAGGGTTAAATGAGCATGCTGGTGGTTGTGACGGAAAATGTCCCGCCGCGGTTGCGCGGCAGGCTGGCGGTGTGGCTATTGGAAGTCCGCGCGGGAGTGTATGTCGGTGATACGTCACAGCGGGTGAGAGAGATGGTCTGGCAGCAGATTATCGAACTGGCGGAACAGGGCAACGTGGTGATGGCGTGGGCGACGAATACGGAATCCGGTTTTGAGTTCCAAACCTGGGGCGAAAACCGCCGAATGCCGGTAGATCTGGATGGCCTGCGGTTAGTCTCTTTTTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTAGAATTTTTTATGCCGAAAAAAGTGTTATAAAACAAATCTCTACTTTTAGA # Right flank : GAATAGTAGAGGTGTAAATCATAACGGTTTCCATCTTGTCAACTCGTTCCGTTTACGGCATAGTGTTTCCAATTTGGAAACAACAGGTAAGGCATCAGGATACATGTTATTTCGCGGGCACCTTTCGACACTGCAACCACTCAGTTTCCGAATCAGGCGGCAGCACTTGATGACCTATATCGGGTGATCAAACGCGAAATGTATGCAACGCCGGACGATATGAAAAAACGCTTCCCCAGCCTGGATAGGATGAAATATCGGGAAAAGTGGTGGGTTATTGATATTGGTGGCGGGCATCTTCGAGTGATGTTTTTTGCTGATTTCGAGCGGGGGAAAATCTTCATCAAGCACATCACATCCCATGCAGAGTACGACAGGCTGACAGAGTATTACCGGAGGAATAAAGAATGATGTACGCAGACGCCATCAAGGCCGCTAACAACCTGACGAGTATCGTACCGTTCCTCGGGGGTAGCACCTCGCGTAAGGATTATGAGGAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 60485-61306 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDRU010000010.1 Pectobacterium versatile strain CFBP5378 Pectobacterium_versatile_CFBP5378_contig_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 60485 29 100.0 32 ............................. AACTGCGGATTTTGCAGGAAGAAACAGGCGTA 60546 29 100.0 32 ............................. CGCCCGCCAGCAGAACGCGGGTATTGATCGCT 60607 29 100.0 32 ............................. GGGTGGCATGCAGATCACGTCGAGGCTGCTTT 60668 29 100.0 32 ............................. CCGTGTTGGACGCGAAAGGCCAGAGGTTCAGC 60729 29 100.0 32 ............................. TGCTAATGCCGGTATCAGCGTCGCCAGTACCC 60790 29 100.0 32 ............................. ACGGTTTGCTCTAACCATTCTTGCATATCTAA 60851 29 100.0 32 ............................. TTGCGCTCTATACCGATGAAGGCGCAAAAATC 60912 29 100.0 32 ............................. CCCTTAACCCAGTATGGCCTCCCATACAAATA 60973 29 100.0 32 ............................. TGCGGTTTTCGACGGGCTTGTAACCCATAGAC 61034 29 100.0 32 ............................. CCAGTGGGTTTCCAGTGCTCTTCGCCCCACGG 61095 29 100.0 32 ............................. CTGGAGGACGTGACGGCTATTGAGCGCCTTGG 61156 29 100.0 32 ............................. ATATTGAAGGTGACGCGCTATATGGTGTTAAA 61217 29 100.0 32 ............................. TCCATGGCGGATCGGCGTATATCAAGCGGTAC 61278 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 100.0 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : CATTCTCTGCTAATTATTTACTGTGTTACTTCAAGACGACGGATATGCATTGATTGCTTCCAATTTATGTCAATATGCTTGTAATCATTAGATATAGTGGATGAAAAACTTTGGTATTTACAAGATATATTGAAATTCGGTTGAGAAAGAATATTTTTAACAGAGAAGTTCTTTACCTAGAAATAGAATCATAGTGGTATAACTCTTGCAGAAGAAATGTACAGCGTTTAATTCAGCGACTGAGCGTTTTCCTGCTGTCTGAAATCAAACTGGCAAATCAGGGAAACGTAGTGATGGTATGGGCGGCGAATGTGGAATTCGGTTTTGGGCTCCAAACCTAGGGCGAAAACCGCCGAATGCCGGTAGATCTGGATGGTTTGCGGTTAGTCTCTTTTTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTAGAATTTTTTATGCCGAAAAAAGTGTTATAAAACAAATCTCTACTTTTAGA # Right flank : GCACTTACCGGAGGTAATCATGAAAATAGATAAGTGTTCCCCGCGCTAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTAGCGGGGATAAACCGGCGTAACCCATTCCTTCCATGTCAGATTGAACGTGTTCCCCGCGCTAGCGGGGATAAACCGTGGGATGACCTCAACGAACAGACAGCAGCCGAGTGTTCCCCGCGCTAGCGGGGATAAACCGTATTCACGCGTTACCTGATTGATCTGATAAACGTGTTCCCCGCGCTAGCGGGGATAAACCGACCATGAACCGCACTGGTCGCGCTAAGGGGTTGTGTTCCCCGCGCTAGCGGGGATAAACCGCGATCGCGCAGCTGGTGGTCGACGAATGGCGCGTGTTCCCCGCGCTAGCGGGGATAAACCGACATGCTGATTTTACGAACCGGTATTTATGACGTGTTCCCCGCGCTAGCGGGGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 61478-62360 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDRU010000010.1 Pectobacterium versatile strain CFBP5378 Pectobacterium_versatile_CFBP5378_contig_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 61478 29 100.0 32 ............................. TGGGATGACCTCAACGAACAGACAGCAGCCGA 61539 29 100.0 32 ............................. TATTCACGCGTTACCTGATTGATCTGATAAAC 61600 29 100.0 32 ............................. ACCATGAACCGCACTGGTCGCGCTAAGGGGTT 61661 29 100.0 32 ............................. CGATCGCGCAGCTGGTGGTCGACGAATGGCGC 61722 29 100.0 32 ............................. ACATGCTGATTTTACGAACCGGTATTTATGAC 61783 29 100.0 32 ............................. CTGATGCCGCATATCACACCATCATTCGATGA 61844 29 100.0 32 ............................. TTTTTGCTAGCAGGTTTAATCTCCGAACTGTA 61905 29 100.0 32 ............................. GGCAGTCTGGCATTCTTCTCTGGTTCATTGAA 61966 29 100.0 32 ............................. TGCGTTGCTTTTCTTGCCCATCAGTAACACTG 62027 29 96.6 32 .......A..................... GCTGATGCGGATAATGTTTCTCCGCGTGATTT 62088 29 96.6 32 .............C............... GACGGCCTCGGGTCGGGCGTTCATCTGCCATT 62149 29 96.6 32 .............C............... GCACAGAGCGTATCGCCTGTTTCACCTCTTCC 62210 29 93.1 32 ............TC............... TGGCACCTCACGGGATGCCTATGCATTTAAAA 62271 29 96.6 32 C............................ GCCATTACGCCTCCGAGGTTACTGTCGTTGTA 62332 29 93.1 0 .............C.............T. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 98.2 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : CCCCGCGCTAGCGGGGATAAACCGTGCGGTTTTCGACGGGCTTGTAACCCATAGACGTGTTCCCCGCGCTAGCGGGGATAAACCGCCAGTGGGTTTCCAGTGCTCTTCGCCCCACGGGTGTTCCCCGCGCTAGCGGGGATAAACCGCTGGAGGACGTGACGGCTATTGAGCGCCTTGGGTGTTCCCCGCGCTAGCGGGGATAAACCGATATTGAAGGTGACGCGCTATATGGTGTTAAAGTGTTCCCCGCGCTAGCGGGGATAAACCGTCCATGGCGGATCGGCGTATATCAAGCGGTACGTGTTCCCCGCGCTAGCGGGGATAAACCGCACTTACCGGAGGTAATCATGAAAATAGATAAGTGTTCCCCGCGCTAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTAGCGGGGATAAACCGGCGTAACCCATTCCTTCCATGTCAGATTGAAC # Right flank : GGGCTTATACCCCTTATTGCATGTTGGTCTAAATATCCCCTACACGGGGTCAAATTCCGCTTCTGGTTGGCGTGATGGGGGATTGCGTGTCAGTATTAAAGCACGCTATTTTTGCGCCCACCGTCACGGTGAGGCGCTATGCCAATGATTTTTGTCTTCCATACGCTACCGTAAGGAGATGATATGAAAGTTGAAGCCGCAGAGTCGTCCGTTTTTGCCAGCCAGCAGGTGATGGCGAAGCGTTCTACCGAGCATGCATAGAAAGCGGCGCTGTCCGAACAGCTTCAGTCTTATCAGGCGGGCAGCGGTGCCGTTCCTGCTGGTCAGACGACACGGTATGATTTCACCCGCATTAGCCCTGCCGAACTGTATGACACGGTTGAAGGCCTTGTCAGCAGTGGTCGGTTAGGGCGTGAAGAAGGGTCCGCGCTGCTGGGTTTTGTCTCGTCGCCGAGAGCCGAAGGAGGAAGCATTCCGCCTTCCAATGTGTTCCAGCCGAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //