Array 1 43867-45787 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYVQ01000004.1 Corynebacterium amycolatum strain UMB7760 NODE_4_length_99533_cov_14.308422, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 43867 29 100.0 32 ............................. AAATTCGACCGCACCGGAGAAGCAACCCCCAA 43928 29 100.0 32 ............................. TGGAAGAACTCAGACAGCAACAGCAGCAGGAG 43989 29 100.0 32 ............................. TGGAAGAACTCAGACAGCAACAGCAGCAGGAG 44050 29 100.0 32 ............................. AAGGTGGTGGGGTAACGATGAAGATTGAGTGG 44111 29 100.0 32 ............................. TGTTATTCGAGACACTGACTGCGTGGTCAAAT 44172 29 96.6 33 ............................A TGAAATTCCCGGCTCATCGGTTCTCCTCCTTCC 44234 29 100.0 32 ............................. TAAGCCGCCTTTTCCTTCGTGAGACGCTTTTC 44295 29 100.0 32 ............................. CACAGTCACTGTTCGTAAAAATGCTCCGAGCA 44356 29 100.0 32 ............................. GAACGAGCCGACGTTTCCGCCCACTTAACCTC 44417 29 100.0 32 ............................. TGAACCCACAACGTTAAAGGGCCACGCACCCG 44478 29 100.0 32 ............................. AGCATCCCCGCCGCCATCAAAGCCAGACGAGA 44539 29 100.0 32 ............................. ATGATGCCGCCGACACGATTCACCCGGATATA 44600 29 100.0 32 ............................. GCTCATGCCGCAGCCGCTCCCACACCTCATCG 44661 29 100.0 32 ............................. GTGTTCACCCCGGGCGCTGACCTGCCGCCGGC 44722 29 100.0 32 ............................. AAGCGCATCAGGTTAATGACCAGGGCGAGCTT 44783 29 100.0 32 ............................. ACAATCTGGCGGGCAAGGTTCGGCAACTGCTG 44844 29 100.0 32 ............................. AAACAAACCGGCGCAGTCGAACGCTCACTCCC 44905 29 100.0 32 ............................. GGAGTTGAAAATCTGGCCCATCTCACCCATCG 44966 29 100.0 32 ............................. AGCAATCCCAGAAGGACAAGCCGGACTCGTAT 45027 29 100.0 32 ............................. AAATACAAGCTGTTTACCTTCGATCTGCTGCA 45088 29 100.0 32 ............................. GCGTCAATCGCATCATTCATCGGCTTACCCAG 45149 29 100.0 32 ............................. CCTGATAGTCACGCCGTCCTGGGCTTCATACG 45210 29 100.0 32 ............................. GCTGAAAACCATCCTGAGAATCAGGCAACGGC 45271 29 100.0 32 ............................. CATGAGATGGTCTGCCACATGAGGTACTTGCC 45332 29 100.0 32 ............................. TTGCCCTACGCTAACCCGATTCGCTGGGGTTG 45393 29 100.0 32 ............................. GAGGTTCTAGCGGACGCGGTTGATAAGCGGGT 45454 29 100.0 32 ............................. ATCGGAGTCTTTCGGCGCGAGGGCTGAGTCCG 45515 29 100.0 32 ............................. GATTGGTGACCGTATTGGCTGTGAGGAGCCGG 45576 29 100.0 32 ............................. AGAACCAATAGTGAAATACGGGGTAACACCGT 45637 29 100.0 32 ............................. AAGGTCAAAGGCGTGTACCGTGGCAGCGCGCT 45698 29 100.0 32 ............................. CGAGCAAGTGGGATATAAGCCTCGCCGCCGGT 45759 29 89.7 0 .A......................G...T | ========== ====== ====== ====== ============================= ================================= ================== 32 29 99.6 32 CTCTTCTCCGCACACGCGGAGGTATTTCC # Left flank : ATTCATCGAAGGGGCATGTTGAAAGAGATGATTGGAGTATTAATGGAGATTCTCGAACCGTATCTGCCAGAAAGAGACGATGACCGGTTGATTGCGGGACGGGGCGACGAAGTGGCTGGGCATACACAGTATGGAAATCGACCCCAGTAACAGTAGGCGCATCCCTTATGTTTTTGGTACTTACTGCATCTAATTTGCCGGAACATCTCCGAGGGTATCTAACTCGTTTCTTAGTTGAAGTTGATACTGGAGTTTTTGTAGGTAACGTGTCGAGACGCGTTCGTGATAATCTATGGAGCCGGTGCAGCCGAGCTATAGGGGAGGGACGTCTAACGATGATTAATAATGATCCCACCCGAGAGCAGGGGTTCGCCGTAAATACGATGGGGAGTAATCGCCGAGTGATTCAGGACTTCGATGGTCTGTTGCTGCCTGTGACCTTATCTGCCGAAACTCGCGGACTTGAAGAAACTTCTTCGTAAAACCGCAGGTCGGGAACT # Right flank : TCAGGTACCAAGCGTCAAGCGCGGCACCCACCTTGTGGCTCAGCCTCACCCCTACCGCTTCCGCAGCACCAACACCAGGTTCGACACCGCGAACTCGCGCAGCACCGGCACGTGCACCATCCACCAGGCCCACCACGGGTGGTAGCGCGGGAAAGCGGCCAGCAGCTCGCAGTCGCCGGCCTCCGCGGCAGCGCGCGCCCACTTCAATCCTTCACCGCAACCGACCTTGAACAGGGACTCGCCAAAGTAGTTCTTTGGTCGCTTGCCGTGCTTCTTCTCATACATGCGCCGCGCGCGGTCGCCACCCAGGTAATGCGTCATCCCCATCTCGTGGCCGCCGAACGGGCCGTACCAAATGGTGTACGAGTAAACGACCAGTCCGCCCGGCTTGGTTACACGCAGCATTTCCTCGCCCATCGTCCATGGCTCGGGCACGTGCTCGGCGACATTCGACGAGTACGTCAGGTCAAACGCGTCATCGCGAAACGGCAGTTCCAGCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCACACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //