Array 1 231098-232179 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 231098 30 100.0 36 .............................. TGTATAGCTTGCCAGCATTCTTACTACCTTGAGATA 231164 30 100.0 37 .............................. CCATCTTTGCCAACCATGATGGAATGGTTGGTATCTT 231231 30 100.0 36 .............................. TCTTTATTAACACTTACTATCTCGCTTAGCCTAGCT 231297 30 100.0 35 .............................. CCTCCACCTAACATTTCTTGCAGCTTAGATAAAGG 231362 30 100.0 37 .............................. ATGCAGTTATTGGGGCCTTCTAAAGTTCCCCCGCCAT 231429 30 100.0 36 .............................. TAGAAAGATATTTAATAAGTAAATATAGACCAAAAT 231495 30 100.0 35 .............................. ACGGTACCTTTAGCAATAAGGTGATGAATTAGTAC 231560 30 100.0 36 .............................. TTTTTATACTATTGTTTATTTTTTATTTGTTCTAAT 231626 30 100.0 35 .............................. TTTATTTAATGATTGGTGCAGTACCTGCTCAGTGT 231691 30 100.0 37 .............................. TCTATATTTACTAATGAGGTATTATATCCTCGCTCCG 231758 30 100.0 34 .............................. TCCATCATTCTTTTAGCTTCAAGCACTAAAGATC 231822 30 100.0 35 .............................. TCATTTTCAGCTCTAGTCTTTAATTCTGTTTTTAA 231887 30 100.0 37 .............................. TACGAAAAGTATTTAACATTAGAATATTACTTTATAA 231954 30 100.0 36 .............................. GTTGCTGTAAAAATAAGTAGTGAAAAAAAGCGAAGG 232020 30 100.0 35 .............................. TGGGTAGAAATGCTCAACCTATAGAATTATTACAG 232085 30 100.0 35 .............................. ATTGCAGAAACATGACTGTATCTAATTGACTTAGA 232150 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 17 30 100.0 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : CGTAGAGGAACAGGGTAAACTGATAGGGTTTGGTAGAATTGTTGGAGATGGAGGAACGGTCTTCTATATACAAGACATAATGGTTAAACCATCATACCAAAAACAAAATATTGGAACACTAATTATGGAAAAGTTGATGTATTACATTGATGATAATTGTATAGATGATGCTATCATTGGTCTTATTGCCATAAGCAAACTTGATAAATTTTATAAAAAATTTGGATTTACATATAACCAAGATAATCACTTTTATAGATATAGTAAATAAGCTTTAAATAGTTTTTATTTTATTAAATTAGGTGTAGCTATATGTAAATATAATTTACCAGCCGTTTTCTGTGGGGGATAGATTGAAGTAGTTGAAAAATCAAGGTTTCAACTAATGAATAGAAAAATTTCTTGAAAATGCGTTGTGATTGGTAAAAGTTTTTATATTATGTTGATTTTACTAGGTTTATGATATATTATCTATAATAAAGAATGGCTATTTTTCAGTA # Right flank : TTTTGGTGTTCAACTCATAAGATATAAATTTAAAATAGCGATTAAAGATGATGAGTCATCTCAGTAATGACTTATTCCTAATGTATATAGAAATATTAGAAAAAAACTTATTGGGATACGGATATTATCTTGCTAAAAATTAATTTTACCAACCTTATTGAAATTTGAAATCCACTTAAAGCCTTTAAAATAGAGCTTAAGTGGGATTTTTTTTGAACAAATTAAAATAGCACTTGGTGCCTGGTAAAAAATCAAGCAATCTCTTTATTTTCAATGGATCTGAGGATATAATAAAAATAAAGAATGTTGATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAATTGCTAATACTTCCTTTCTAAGTGTTCTTAAGTTCTAGTTGAACCTTAACATAGGATGTATTTAAATTCACACCTACTTATATGTTTTTCTAAAGGCTCCTTGTTGAACCTTAACATAGGATGTATTTAAATTTTCTTCACCTCTGCTATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 232499-233454 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 232499 30 100.0 36 .............................. TGCTAATACTTCCTTTCTAAGTGTTCTTAAGTTCTA 232565 30 100.0 35 .............................. TCACACCTACTTATATGTTTTTCTAAAGGCTCCTT 232630 30 100.0 37 .............................. TTTCTTCACCTCTGCTATAAACCTATTTTAACTAAGC 232697 30 100.0 37 .............................. ATTAGCGTATATGTTAGGGATAACCAGGTCTGCAATT 232764 30 100.0 35 .............................. ATATCTTTTACTTTTACCCATTCTTCTTTCCATGC 232829 30 100.0 36 .............................. AGTATTAAATCCTTCTCCAGTTGCTTGTATCTCTTC 232895 30 100.0 36 .............................. TCATTAGTACATTCTCCTATTTTTTCTTTTAAGTCA 232961 30 100.0 36 .............................. CAGGTAACTTCATCATGGCGGTACCTTTGATGTTTT 233027 30 100.0 36 .............................. TCGCATTTCTCTTTAGATAGATATTGTGTTTCTATC 233093 30 100.0 36 .............................. GTAAAAGCTTTTAATAAGTTTGAAGAATCTTTTATA 233159 30 100.0 36 .............................. TTAACATAAAAATAACCGTTAACCCAAGCTTTTCCT 233225 30 100.0 37 .............................. CCAAAGAGATTATTAGCATTTGACCATACTGTTTTAA 233292 30 100.0 36 .............................. AAGAAGGGGATATACTTATACAAACATTCTTAACCA 233358 30 96.7 37 ...A.......................... AAGAAGCAATGAATGTAGAAGCAGCCCTTCAACAAAT 233425 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 99.8 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AGTAGTGAAAAAAAGCGAAGGGTTTAACCTTAACATGAGATGTATTTAAATTGGGTAGAAATGCTCAACCTATAGAATTATTACAGGTTTAACCTTAACATGAGATGTATTTAAATATTGCAGAAACATGACTGTATCTAATTGACTTAGAGTTTAACCTTAACATGAGATGTATTTAAATTTTGGTGTTCAACTCATAAGATATAAATTTAAAATAGCGATTAAAGATGATGAGTCATCTCAGTAATGACTTATTCCTAATGTATATAGAAATATTAGAAAAAAACTTATTGGGATACGGATATTATCTTGCTAAAAATTAATTTTACCAACCTTATTGAAATTTGAAATCCACTTAAAGCCTTTAAAATAGAGCTTAAGTGGGATTTTTTTTGAACAAATTAAAATAGCACTTGGTGCCTGGTAAAAAATCAAGCAATCTCTTTATTTTCAATGGATCTGAGGATATAATAAAAATAAAGAATGTTGATTTTACAGTG # Right flank : TTTTGGTGTTCAACTCGTAAGAAATAAATTTAAAATAGCGATTAAAGATGATGAGTTATCTCAGTAATGACTTATTCCTAATGTGCATAGAAATATTAGATATAGAAATATTAGAAAAAAGCTCATAGGGATACGAATATTGTCTTTCTAAAAAGTAATTTTATCAGCCTTATTGAAATTTGAAATCCACTTAAAGGCTTTAAAATAGAGCTTTAAGTGGGATTTTTTTTGAACAAATTAAAATAGCATTTGGTGCATGGTAAAAAATCAAGCAGTCTCTTTATTTTCAATGGGCTTAAGGATATAATAAAAATAAGAAATGTTGATTTTACAATGGGTTGAACCTTAACATAGGATGTATTTAAATTTTCTTCTTATGCTAAAAGCCTCAAGTATTACTTTATGTTGAACCTTAACATAGGATGTATTTAAATCCATTTAATGCTGAGTTGTCTACTTTTATAGCACCAGTTTAACCTTAACATGAGATGTATTTAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 233791-234018 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 233791 29 100.0 38 ............................. TTTTCTTCTTATGCTAAAAGCCTCAAGTATTACTTTAT 233858 29 100.0 37 ............................. TCCATTTAATGCTGAGTTGTCTACTTTTATAGCACCA 233924 29 89.7 37 ...T...........GA............ GTGTTTATATGGTCTGGCTCTATTCTTGTCCATCTTT 233990 29 86.2 0 .C.....T.......G.A........... | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 94.0 38 GTTGAACCTTAACATAGGATGTATTTAAA # Left flank : AGTTGAACCTTAACATAGGATGTATTTAAATAAGAAGGGGATATACTTATACAAACATTCTTAACCAGTTAAACCTTAACATAGGATGTATTTAAATAAGAAGCAATGAATGTAGAAGCAGCCCTTCAACAAATGTTGAACCTTAACATAGGATGTATTTAAATTTTGGTGTTCAACTCGTAAGAAATAAATTTAAAATAGCGATTAAAGATGATGAGTTATCTCAGTAATGACTTATTCCTAATGTGCATAGAAATATTAGATATAGAAATATTAGAAAAAAGCTCATAGGGATACGAATATTGTCTTTCTAAAAAGTAATTTTATCAGCCTTATTGAAATTTGAAATCCACTTAAAGGCTTTAAAATAGAGCTTTAAGTGGGATTTTTTTTGAACAAATTAAAATAGCATTTGGTGCATGGTAAAAAATCAAGCAGTCTCTTTATTTTCAATGGGCTTAAGGATATAATAAAAATAAGAAATGTTGATTTTACAATGG # Right flank : ACTTTGGTATTTAACTCATAAGAAATAAATTTAGAATAGTACTTAAAGGTGGTGAGTCGTCTCAGCTATGGCTTGCATTCTAATATATATAAGTACTAGAAAAAACTCATTAATATATGAATACGGTCTTGATAAAAATTAATTTTACCAACCTCATTAAAATTCCTTTTAAGGTCCTTAAAATACGGCTTTAAGAGGAATTTTTTGAATAAAGTAAAGAAATGCCTGGTGCTTGGTAAAAAATTAAGCAATCTCTTTATTTTCAATGGGTTTAAAGATATAATAAAAAGAAAGAATGTTGATTTTACAGTGGCTTAACCTTAACATGGGATGTATTTAAATTTTGGTGTTCAACTCATAAGATATAAATTTAAAATAGCCATTAAAGATGATGAGTCATCTCAGTAATGACTTATTCCTAATGTATATAGAAATATTAGAAAAAACTTATTGGGATACGGATATTATCTTGCTAAAAATTAATTTTACCAGCCTTATTG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 234679-235826 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 234679 30 100.0 34 .............................. TATAGTTCTTTTTAAAAAGAATGATGTAATTTAT 234743 30 100.0 34 .............................. CATGAGAAAAGGAGAGTATCTTATGGCACTGCTT 234807 30 100.0 36 .............................. CATTGTAATTTTTAGGTATTGCTCCATTATGCTCTT 234873 30 100.0 36 .............................. GCCATTAAACCACTTCCAACAGAATTATTGCGCTTT 234939 30 100.0 36 .............................. CCGTAGATAGTTTCAAATGTGCAATCAATATTTACC 235005 30 100.0 35 .............................. ACCCTTTCGGCAAGCTCCTTTTGAGAAAGTTTAAT 235070 30 100.0 35 .............................. GAGGAATTAAATAAAATATTTACTGCTATAGATGA 235135 30 100.0 36 .............................. TACTTTTTAATGAGTTTTGAGTATGCTTTAATTGCC 235201 30 100.0 36 .............................. TTTGTTGCTAAATCCCTATTTGTAAATGAAAAGTTG 235267 30 96.7 36 .......................C...... GTTGTTGTATATTTCGCCTCGAAGCATATTGCCCGA 235333 30 86.7 37 .T.T...........GA............. CTTGCACCAAGGTTATGTACTAGAAAGGAATAAAATA 235400 30 90.0 36 .T.T...........G.............. CTCAATCCATCTAGTTTCTTAACTGCTAAATATATT 235466 30 86.7 35 .T.T...........GA............. TTCCACTCTTTATCTGACAATTTACAGCTTCTTAT 235531 30 86.7 36 .T..........T..GA............. CGAGGACCAGCAGAACTTGATAAGTTCTTAGAAAAT 235597 30 90.0 36 .T.............GA............. CTTACTTGTGTCCATTCGAGTTGTATTTTTCTTTTA 235663 30 96.7 38 .T............................ ACTATAACCACCTTTATTCTCATATACCAACATCCCCC 235731 30 96.7 36 ................A............. CTAGCTAGTGTCTTTATAGTGTTAAGAACATTTATC 235797 30 96.7 0 .......T...................... | ========== ====== ====== ====== ============================== ====================================== ================== 18 30 95.9 36 GATGAACCTTAACATAGGATGTATTTAAAT # Left flank : ATTCCTTTTAAGGTCCTTAAAATACGGCTTTAAGAGGAATTTTTTGAATAAAGTAAAGAAATGCCTGGTGCTTGGTAAAAAATTAAGCAATCTCTTTATTTTCAATGGGTTTAAAGATATAATAAAAAGAAAGAATGTTGATTTTACAGTGGCTTAACCTTAACATGGGATGTATTTAAATTTTGGTGTTCAACTCATAAGATATAAATTTAAAATAGCCATTAAAGATGATGAGTCATCTCAGTAATGACTTATTCCTAATGTATATAGAAATATTAGAAAAAACTTATTGGGATACGGATATTATCTTGCTAAAAATTAATTTTACCAGCCTTATTGAAATTTGAAATCCACTTAAAGCCTTTAAAATAGAGCTTTAAGTGGAATTTTTTTTGAACAAATTAAAATAGCATTTGGTGTCTGGTAAAAAATCAAGCAGTCTCTTTATTTTCAATGGGTTTAAGGATATAATAAAAATAAGGAATGTTGATTTTACAATG # Right flank : TTACATTCCTCTAAAGTGAGAGTGTAATATAATTGACTGTTGCAAAGAATTTGTTTTTTCACTTAGTGGTACTTTAATTTTAGATCATTCGGTTTTTATGTGGGCACTTTTATGGCTCAGTTTTTTAGACTAATACTGATAGGCCGAAGAAATCAATTGAATTTTCTCTACACTCGTTTCTTGGTCTAATAACTCTATTCTTAATGAATCTTTTCCTGATGTTTTATTAAATTTTCTTTTACCTCTTTTCTTTCAACTACTTCTAAAAGAGCCTCTATTCCATAATCATCATCTAGCGGTTTAACGGTTGCTCTCTAAAAATACAATGCAAATTTTTTATTATCGCGGATTTAGTCCACATGCTAAAGACGTATCTTTAGCTAATCTTATTACTAATTTATAATGAAACTTTTAGACGGAACAGGTCTTTCTATAGTTAAGTATTATTTCTTTAGGGCAATTTTAATCATAGGGTAATGATTCGTTTGTTATAACAAAAT # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 5 247585-248537 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 247585 30 100.0 35 .............................. TCTTGGAATAACCAATCAAAGTCTATAATCCATCC 247650 30 100.0 36 .............................. TCATATAAGTTTTAAGCTGCAGTATTTTATTATTTT 247716 30 100.0 36 .............................. GTACGTAACATACACTTGATATAAATACAATTTTTA 247782 30 100.0 35 .............................. TATTATTAATTAAGCTATTTTGTTTTTCTATAAGT 247847 30 100.0 37 .............................. TATTATTTAATATTCCCTTATAGAAATTCAAAGTTTC 247914 30 100.0 38 .............................. TTAGCAACATTTTGGGCTATCTCTTTATCTTCTTCAGA 247982 30 100.0 34 .............................. TACAGGTTTTCATAATTCATAATAATGGCTGCTA 248046 30 100.0 36 .............................. CCCAATCAGGTGCTGGAGCTTGAGGACATGGACACA 248112 30 100.0 40 .............................. GCTTGAATTGTACAATATCTATTTATAACAGGCTCATATA 248182 30 100.0 34 .............................. TGTTTTCTCTGCTAGTCTTTGCATATATTTGCGT 248246 30 100.0 36 .............................. AGAAGAAAAGAAACTCCAAGAAGAAATTAAAGTTAA 248312 30 100.0 34 .............................. TATATTAAGGTTTATACATTCATGATAGCATTAA 248376 30 100.0 36 .............................. TCTGTTCCCATGCTAATAGGTTCAGAGGTTCTCATG 248442 30 100.0 36 .............................. TATTTACTAGCACTCCCTGGTGTAAGTTGCTATGCT 248508 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 15 30 100.0 36 GTTGAACCTTAACATGGGATGTATTTAAAT # Left flank : AAGGCGGAGTTCAAACAATTTTAAATAAGTTAAAACCATTTTTAAAAAAATATGATAAGTTAGATATAAGTAACTTAAGATATTAACCTGTACAAGACAGGCACTGCCGCTATATGAAAACTCAGGAAGATAAGCAGTGAAGGGGCTTATATACTCAAAGACTCTGAAAAGGAAACATCGAACGTAATGCCCATGGAATCAGGTTCTGAAGTAGAGCTCGTATATAAAGCATCAGATAAATTAAAAGAAAAAGGGTTGAAAATGTTATTAATAAAGTAGAAAAAAACTCATTAGGATACGAATATTGTCTTGCTAGAAATTAATTTTACCAGCCTCATTGAAACTTAAATTCTTCTTAAAGTCTTTAAAATAGGGCTTTAAGGGAATTTTTTTTGAATAAATTAAAATAGCACTTGATGCCTGGTAAAAAATCAAACAATCCCTTTATTTTCAATGGGTTTAAAGGTATAATAAAAAGAAAGAATGCTGATTTTACAGTG # Right flank : TTTTGATGTTCAACTCGTAAGAAATAAATTTAAAATAGCGATTAAAGATGATGAGTCATCTCAGTTATGCATATAAATATTAGAAAAAACTCATTGAGATACGGATATTGTCTTGCTAAAAATTAATTTTACCAGCCTTGTTGAAATTTGAAATCCACTTAAAACCTTTAAAATAGAGCTTTAAGTGGGATTTTTTTTGAACAAATTAAAATAGCACTTGGTTCCTGGTAAAAAATCAAGCAATCTCTTTATTTTCAACGGGTTTAGGGATATAATAAAAATAAGGAATGTTGATTTTACAATGGCTGAACCTTAACATAGGATGTATTTAAATAAGTATTCATCTGACCACCCTTGAAGTCTAAAGCACGCTGAACCTTAACATAGGATGTATTTAAATAAGATTATCCCTCCCCAACCGGTGTCAAATCGCTTCGCTGAACCTTAACATAGGATGTATTTAAATTCAGCTATACTATCAATAAATGACTTTTGTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 6 248843-251171 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================== ================== 248843 28 100.0 38 ............................ AAGTATTCATCTGACCACCCTTGAAGTCTAAAGCACGC 248909 28 100.0 38 ............................ AAGATTATCCCTCCCCAACCGGTGTCAAATCGCTTCGC 248975 28 100.0 37 ............................ TCAGCTATACTATCAATAAATGACTTTTGTTTTCTGC 249040 28 100.0 38 ............................ TAATTACATTTTACGACAATATTTTTGCGAATAAAAGC 249106 28 100.0 38 ............................ AATCATTCTCTTTTATTGTTATGTCTTCAGAATATGGC 249172 28 100.0 38 ............................ AGTTTTCCGCCTTCCCCTATAGCCATTCTTTTACGAGC 249238 28 100.0 36 ............................ GCTATTGCTAATTGCATTACAGTAGGTGTAAAACGC 249302 28 100.0 37 ............................ CGACATATGTAGAGGTAAAAACGCAATAATCGAAAGC 249367 28 100.0 38 ............................ TCATTTAGCTCAGTAGATCTGTTTTCTAGAACTTGTGC 249433 28 100.0 37 ............................ AAGAAAGGTGCAAATAAACCTATAACTAGGCAACAGC 249498 28 100.0 38 ............................ TATTCATACTCTTCCTCTGAAGAATCTGAAGAAGTTGT 249564 28 100.0 38 ............................ ATGCTACTGAGTGCAAGACCGTCGCTTTACCGTCTGGT 249630 28 100.0 39 ............................ TTGTAATAACCTCCATATAATTTAATTGTTAATTACAGT 249697 28 100.0 37 ............................ AAAGTTACATCTCGGCGGGTTACCGATTTATCCCGCT 249762 28 100.0 40 ............................ CTAAAGGGTGGAAGTGAAGGCAACTACCCAATGCTATTCT 249830 28 96.4 36 ..............A............. TGGGTCATTCCTACAGCTCTATACAAGCTATTACGT 249894 28 89.3 38 .............GA....C........ CCAATAAAAACCGCAGATTTAGGAATAGAGACAGACGT 249960 28 92.9 36 .............GA............. GAGAACATAAAAAAACTAAATGAAGCTAGAGATGGT 250024 28 96.4 39 ..............A............. GAAGGGAAGGAGGACGCCAATGGAAGGGCTAAGCAGGGT 250091 28 96.4 37 ..............A............. TCTGTTAGAGCTTCTCTTAGTCTTTTGGGTTCTTTGT 250156 28 96.4 39 ..............A............. TTACATAAGGCAGGCACTTGTTTTTTCTGCACCATTCGT 250223 28 96.4 39 ..............A............. TGTTCAGGAAGGTTTCTAGTTCTTCCCCCATTAGCCTGT 250290 28 96.4 39 ..............A............. GTACAGATTTAGTGTCTATGGCTAATTCTTTAAACTTGT 250357 28 96.4 37 .............G.............. AGCCTGGAAGCTTCGTTAAAGAGAGTTTCTGAAATCT 250422 28 92.9 38 .T...........G.............. GCCAATTGGTCTTGATTGAGTCCTTTATCTTCCCTTCT 250488 28 89.3 38 .T...........GA............. TATCCTGTGGAATATTGTTTAATAGGGAGTTGATGACT 250554 28 92.9 37 .............GA............. CTGGAATAATCTTTTTCCTTTTTTATTCTTACGATCT 250619 28 92.9 38 .............GA............. GCAAATTTCAGTGTAAATCCAAGCACTTCAAATAGTCT 250685 28 92.9 38 .............GA............. TTGTGTGTAATTGTGTATGTTCCCTGGACAATTATTCT 250751 28 92.9 36 .............GA............. ATGGGTATTGTTACACGATAACTGAACGGCAAGACT 250815 28 92.9 38 .............GA............. GGGAGTAAGGGTATTGACCCAAGGCCTCATCATGTGCT 250881 28 92.9 36 .............GA............. TCAATAAGAGCTTCATCTTCCTGAAGCTTAACTACT 250945 28 92.9 39 .............GA............. ATAAGTAGGTCCAAAGGTAAAGTTAAATACTACTTAACT 251012 28 92.9 39 .............GA............. TTCAAAAGGGAGATTCTAATAATATATGGGTAATTTCCT 251079 28 92.9 37 .............GA............. CTTATAGTTGCTTGTCCAACTTTTGCACTTTTAGCGC 251144 28 92.9 0 .............GA............. | ========== ====== ====== ====== ============================ ======================================== ================== 36 28 96.3 38 TGAACCTTAACATAGGATGTATTTAAAT # Left flank : ATATTAAGGTTTATACATTCATGATAGCATTAAGTTGAACCTTAACATGGGATGTATTTAAATTCTGTTCCCATGCTAATAGGTTCAGAGGTTCTCATGGTTGAACCTTAACATGGGATGTATTTAAATTATTTACTAGCACTCCCTGGTGTAAGTTGCTATGCTGTTGAACCTTAACATGGGATGTATTTAAATTTTGATGTTCAACTCGTAAGAAATAAATTTAAAATAGCGATTAAAGATGATGAGTCATCTCAGTTATGCATATAAATATTAGAAAAAACTCATTGAGATACGGATATTGTCTTGCTAAAAATTAATTTTACCAGCCTTGTTGAAATTTGAAATCCACTTAAAACCTTTAAAATAGAGCTTTAAGTGGGATTTTTTTTGAACAAATTAAAATAGCACTTGGTTCCTGGTAAAAAATCAAGCAATCTCTTTATTTTCAACGGGTTTAGGGATATAATAAAAATAAGGAATGTTGATTTTACAATGGC # Right flank : TTTTGGTGTTCAACTCGTAAGAAATAAATTTAAAATAGCGATTAAAGATGATGAGTCATCTCAGTTATGCATAGAAATATTAGAAAAAACTCATTGATATACGGATATTGTCTTGCTAAAAATTAATTTTACCAGCCTTGTTGAAATTTGAAATCCACTTAAAGCCTTTAAAATAGAGGTTTAAGTGGGATTTTTTTGAACAAATTAAAATAGTATTTGGCCCCTGGTAAAAAATCAAGCAATCTCTTTATTTTCAACGGGTCTAAGGATATAATAAAAATAAGGAATGTTGATTTTATAGTGGGCTGAACCTTAACATAGGATGTATTTAAATATTTCAATACCTTTCTGAAAGTTATAATTTCCAATGGCTGAACCTTAACATAGGATGTATTTAAATATAGTAGAGAATATATTAAGATAAATAAAACATTAGCTGAACCTTAACATAGGATGTATTTAAATTAAAGTAAGTAGTATGACCGAGAATAAAATAATAA # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : TGAACCTTAACATGAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 7 251475-251898 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 251475 30 100.0 36 .............................. ATTTCAATACCTTTCTGAAAGTTATAATTTCCAATG 251541 30 100.0 35 .............................. ATAGTAGAGAATATATTAAGATAAATAAAACATTA 251606 30 100.0 36 .............................. TAAAGTAAGTAGTATGACCGAGAATAAAATAATAAC 251672 30 100.0 36 .............................. CCAGGAAGCAATAACTTTTTTATAGTTTCAACAGGA 251738 30 100.0 35 .............................. AATAAGGGTATTGTGGAGAAACAATGGAAATGGAA 251803 30 93.3 36 .T..............A............. AACCATACTATTGTTCCATCAAATATCATTAGCCTG 251869 30 80.0 0 .T.............G......CCA.T... | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 96.2 36 GCTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AAGTAGGTCCAAAGGTAAAGTTAAATACTACTTAACTTGAACCTTAACATGAGATGTATTTAAATTTCAAAAGGGAGATTCTAATAATATATGGGTAATTTCCTTGAACCTTAACATGAGATGTATTTAAATCTTATAGTTGCTTGTCCAACTTTTGCACTTTTAGCGCTGAACCTTAACATGAGATGTATTTAAATTTTGGTGTTCAACTCGTAAGAAATAAATTTAAAATAGCGATTAAAGATGATGAGTCATCTCAGTTATGCATAGAAATATTAGAAAAAACTCATTGATATACGGATATTGTCTTGCTAAAAATTAATTTTACCAGCCTTGTTGAAATTTGAAATCCACTTAAAGCCTTTAAAATAGAGGTTTAAGTGGGATTTTTTTGAACAAATTAAAATAGTATTTGGCCCCTGGTAAAAAATCAAGCAATCTCTTTATTTTCAACGGGTCTAAGGATATAATAAAAATAAGGAATGTTGATTTTATAGTGG # Right flank : TGTTGATTAAGCTGATTAAATTATGACCACCTTCCTATATTAAATATTCTTAATTCACTACACAGTAGCTAGCTAGTAATTAATGTGCATTAATTTTAGATATGATTCCTTGTCTTAAGAGAGTTCTCCAAAGCTTAGTATAGGTAGTAAGTAAATAGCTATAATAATATTAAATTTAGGACCTAATTGAGTTAATAACTCTATTGAGTTTTAGCATATTATGTTTATCAATTCTGTAAAGAGCTTCTCTACTGTTGACCTTCTTTTTTAATTCTTTATTACATAAAAATAGAAGCATTTTCAAATAAGCACTCCAAACAATATAAGTATTTCGTATAAATTTATTTTTAATTTATCGCATCGAAATTTGTATATAATTTCTTTATTATACATATATATGTTATAATATAGATAAAATTGTATAAAGAGGTGTATAAATGAAACTTTGGGAAATGACTATAACAGTAATGTTGAAAAAAGATATATATTTTCAAGACTGT # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 8 261169-261788 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 261169 30 100.0 36 .............................. TGCAATCTCTTAAACTGTCTGAAGTATTTTGCTTTC 261235 30 100.0 35 .............................. TGGCTTTCAATCTTTAATACTCTTAGATAATAAAT 261300 30 100.0 35 .............................. AAATCTCCGGCCCACAAAGCTATTTCTTCCTTATC 261365 30 100.0 35 .............................. TAAGAAAAGATACTGGAAATAAAGTAAGTTAAGTC 261430 30 100.0 36 .............................. GAAGGTGCTAAATATATAAGTTTAAGTAAGTAAGGC 261496 30 100.0 35 .............................. ATTACTAAATCGGCCTCATCAGATTTACTTTTATT 261561 30 100.0 35 .............................. CCGTTACTATTTATAAAACCCCACTTCTTATTTAA 261626 30 100.0 36 .............................. AAATAACTACCCTTAATTCTTATGCTGGCGTACTTT 261692 30 100.0 36 .............................. TATAATGAGTGAACTGCTTCTTTTGTATTTTTTGAT 261758 30 100.0 0 .............................. | G [261785] ========== ====== ====== ====== ============================== ==================================== ================== 10 30 100.0 36 GCTGAACCTTAACATGGGATGTATTTAAAT # Left flank : GATAAAGAAGAGATAATAAAATTAGCAGAAGTAATTAAAGAAAATTTAGAAATTGCAGGGCAGTGGAAATACATTTTAGGAAAGAAAGGTAAAGAAAATAAAACATTAAAAAGGATTGAAGAGATTTGCCTAATATTAAACATTGATTTACCTAAATAACGGTAAGATTCCTGAACTTTAACATGAAATAATCATAAGCAATAAATTTGAAATAATTATTAAAAATGATGAGATGTCCCAACTAATGGCTTACATTGCAATGAGCACAGGAATATTAGAGAAAAACTCATTGGGATACGGATACTGCCTTGCCAAAGATTAAATTTACCAACCTCATTAAAATTTAAATTCCTCTTAAAGCCTTTTAACATAAGGCCTTAAGAGGAATTTTTTTGAGCAAAGTAAAATAATACTTACCGCCTGGTAAAAAATCAAACAATTCCTTTATTTTCAATAGGTTTAAGGATATAATAAAAATAAGGAATGTTGATTTTGCAATG # Right flank : TAATAATAGAAAATATCTTTGTAATACTACGCAAAAACACCGTAAAATTCAGGTTTGAATAATACAGTGTTTTAGTAAATTATTCATTTTTCAGTTATGATATTAAATAAGAATGTCCTGAACTAAAATATTACATAAAATTCATTTAAAGATATATGAAGAATCTATTAGTCTCACGGTATTCGATTTATGTATTTTGTTAAATTGCCATCATCAGATAATCCATGACACCAGATGTAAAGATTTTAGTAAAGCCAAAATGCTCAAATGCTTCGGTGTTCTTGCTATTTTCATGCTGCCACATTTCAAGAGAAGACATTCCCATCATTTTAGCTTGTCTCTTCATTTCATCTAGCATTTTTTCCATTATTATATCATCATCAGCTCCTGTAAGCATAAAATTATTATCAAATAAAAAACCAACTGGGTGTGAATATATTCTCATAAGTGGAAGTGCCATGATCACTTTGCCGTCAACTTGGGCTACTAGATGAATCCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 9 272870-273817 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 272870 30 100.0 36 .............................. TTTGTTTTGTAAAGATATATAAAGCTTCCTACCAAT 272936 30 100.0 36 .............................. CCTGGTCATTAAATAACTGTGAAAAAGATACTAATA 273002 30 100.0 36 .............................. TCAACCTTTCTGAAATCTCCCAATGCCGGATTGGCT 273068 30 100.0 36 .............................. ACTTCTTCGAGTTCATTTTGAATTTGTATTTTGCCA 273134 30 100.0 34 .............................. AGAAGCAAGTCTCTATTCAAAGCACATTGTATTG 273198 30 100.0 36 .............................. GAGTATTTTCTAATCTTTGCTCTTTTTATATATACT 273264 30 100.0 37 .............................. GAAGGAATAATTGCAACAAGTGCATGTTTGGGTGGAA 273331 30 100.0 36 .............................. GCAAGGGAATATGCTTAATGAGAAAGGGATAACAAC 273397 30 100.0 34 .............................. ACAACACAACGCTCTATTCTACAAGGTTTATAAC 273461 30 100.0 35 .............................. TCGGTTGAATAATGTAGAGCTTATATGCACAGATA 273526 30 100.0 35 .............................. GACTTATGTTGGACAGAGAAGGGCAGAAAGTTTAT 273591 30 93.3 37 A..G.......................... GATAATTATTCTCTTCTTCTTGCCACAGTAAAAGGCA 273658 30 93.3 34 A..G.......................... AAATATCTAGTTTCGCCTTCAACTTCCTTCTTTC 273722 30 93.3 36 A..G.......................... TTAAAAATGCTTGTACAATAATTTATTCAAAAACTA 273788 30 86.7 0 ...............A.T.......C...C | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 97.8 36 CTTTAACCTTAACATGGGATGTATTTAAAT # Left flank : TTATCCCATTTAGTTTAAAGGATGGTATGTAATATGGGGAAGGACATGAATTATAATTATGCTTTTCTATTCTATGATGTAAAGGAACAAAGGGTACAAAGAGTTTTTAAAGTATGCAAAAAATATTTATCCCACTTCCAAAAGTCAGTGTTTAGGGGAGAAATATCACCCTCAAAGCTTATACTGCTAAGAAAAGATCTAAACAAGGTAATTGATAAGGATGAAGATTTCATATGCATAGTAAAACTTATAAATGGAGAAGTCTTCGGAGAAGAAATAATAGGCAATCAAAGCAATAACACCGGAGAAGATCTAATAATTTAATTTTACCAAGTGGCTTATAGAAGAAAAGTGTGGAAAGTCTTGAAAACACAAGGCTCATAAAGGATATTTAAAAAAGATTTTTTTCTCGAGGTCACTTGGTAAAAAAAATCATATTGTATTGATTTTACTTAGGTTATGCTATATCATGTATAATTAAGAATGGCTATTTTTCAAGC # Right flank : CTTTGGTATTCAATTCATAAGGAATGAATTGAATATAGTGGTTAAAGATGATGGGTTATCTCAGTAACGGCTTATATTTTAATAGATATGGAAATATCGCGAAAACTTATTTGGATATGTATACTGTTTTGCTGAAGATTAAATTTACCAACCTCATTAAAATTTCAATTCTTCTTAAAGCCTTTAAAATATGGCTTTAAGGGAGATTTTTTTGAATAAAGTAAAACAATGACTGATGCCTGGTAAAAAATCAAGCAATCTCTTTATTTTCAATGGATTTAGGGATATAATAAAAACAAAGAATGGCTATTTTTCAGTTCTTGAACCTTAACATGAGATGTATTTAAATGGTGATAGCACTGGCGAAGGTCGGTGCTATTTTATTCTTGAACCTTAACATGAGATGTATTTAAATGTAGATGCAGATAATCCAAACTGGATAGTAATTGCTTGAACCTTAACATGAGATGTATTTAAATATGTTAGATCAAGCAGCAAAT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : ATTGAACCTTAACATGGGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 10 274136-275148 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 274136 30 100.0 36 .............................. GGTGATAGCACTGGCGAAGGTCGGTGCTATTTTATT 274202 30 100.0 34 .............................. GTAGATGCAGATAATCCAAACTGGATAGTAATTG 274266 30 100.0 36 .............................. ATGTTAGATCAAGCAGCAAATATGGAGCAATATAAA 274332 30 100.0 35 .............................. TCGGAAGTAATCTGTTCAAATGGCTTGTTTATCTT 274397 30 96.7 36 ............T................. TCAAACAAGTCTTTATCTACTGCCTGAGACCCATTG 274463 30 100.0 36 .............................. GATATAGATGAGGTTAATAAGATCATAACAGTAAAG 274529 30 100.0 36 .............................. TTAAAGTATTCTCCTGTAAATTGTTTTTCACTATCC 274595 30 100.0 35 .............................. AACAATAATTATTTTAATTGCAATCATAGTAATTG 274660 30 100.0 36 .............................. TTAAATATAATCATTGATGATTCTAAATCTTTATAA 274726 30 100.0 36 .............................. TTACACTCTTATCACTAGGTTTCTCTATAATAATAA 274792 30 96.7 36 ...............A.............. TTTTTTATTTCTACTTCACTTACTAAAGCAGATTTC 274858 30 100.0 36 .............................. AGTAATTAGGTTTTGTGATACAAGAATAGCAATATA 274924 30 100.0 35 .............................. ATAATTGATGAATATTATGATGATGATTTTAGTGG 274989 30 100.0 36 .............................. AGAAGAACTTTATAACCAAGTAATAGCAAAGGTAGG 275055 30 100.0 34 .............................. TATCCTGATCCCATGACCAAGAGAGCTGCTTCTC 275119 30 86.7 0 ...T........T..AG............. | ========== ====== ====== ====== ============================== ==================================== ================== 16 30 98.8 36 CTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : CTTCTTGCCACAGTAAAAGGCAATTGAACCTTAACATGGGATGTATTTAAATAAATATCTAGTTTCGCCTTCAACTTCCTTCTTTCATTGAACCTTAACATGGGATGTATTTAAATTTAAAAATGCTTGTACAATAATTTATTCAAAAACTACTTTAACCTTAACATAGTATGTATTCAAACTTTGGTATTCAATTCATAAGGAATGAATTGAATATAGTGGTTAAAGATGATGGGTTATCTCAGTAACGGCTTATATTTTAATAGATATGGAAATATCGCGAAAACTTATTTGGATATGTATACTGTTTTGCTGAAGATTAAATTTACCAACCTCATTAAAATTTCAATTCTTCTTAAAGCCTTTAAAATATGGCTTTAAGGGAGATTTTTTTGAATAAAGTAAAACAATGACTGATGCCTGGTAAAAAATCAAGCAATCTCTTTATTTTCAATGGATTTAGGGATATAATAAAAACAAAGAATGGCTATTTTTCAGTT # Right flank : TCATAATGAATCGATAAATAGCTATTTTGCATTCTAAATCATAAGTAAATGCGAAAAATAGTCTTAACCATTGATATTGCTTGGTTAAGGCTGTTTTTATAAGAGAAAATATTGTATCATAAGAAAAAGTAATATAAAGGGGTTAAAAGGTATAAAAAGGCTCTATAATGTTAATAATGAAAATAAAAAGTATCAAAATTATAACATTTAGATTATAATTATAGTATAAAAGCTTTTAGGTATAAAAAGAGGTGATAATAATGAATAGATTGAAGTCATATGAAGTATTTAAACCAGGATTATTTCCAGAATATACTTATGTATCTAGAATGTCATCAGAAGTTATGTTTAGTTATGAGTTTAGATTAGAGCAAGCTTTAAAGACGCCGGGTTATCTTACTTCAATTATTGGACCATCTAAAACTGGAAAAACTGTTTTATGTGAAAAGGTTATAGGGATAGATAATATTGTATCTATAACAGGAAGTGACTTTAAAAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 11 285109-286252 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 285109 30 100.0 36 .............................. AGAGTCATGTTTTCAGTTTGTTCAGCTTGTACAAAT 285175 30 100.0 37 .............................. TGGTTCCATTAGCGTTTCTTTCTGCTTTACTTAAATC 285242 30 100.0 35 .............................. TGAGGTGTTCATATGACAACTTTAGGAGAAAGATT 285307 30 100.0 34 .............................. CCATCTTTACCGACCATGATTGAATGGTTGGTAT 285371 30 100.0 35 .............................. TGCCTATTACACCTACTTTTCAATGTAATTAAATA 285436 30 100.0 34 .............................. AAGGGTTATGCTTAAAAGGCTAACTCCAGAATTA 285500 30 100.0 35 .............................. GATATAGAGGAAAAAATGTATATCTACCTTAAGAC 285565 30 100.0 35 .............................. TTTGCTCAGAGGTCGCAAAGGTATGTTAATGAAAA 285630 30 100.0 36 .............................. TTATTATTCTCCCCTATAACCCGCCCTTAGAATTCA 285696 30 100.0 36 .............................. CTTCTTTTATCCCTTTGTTCCTGCTTTTTAAGAGTA 285762 30 100.0 36 .............................. AAGTATGACATTAGAAGAGTTTAAAGTACAACATCT 285828 30 100.0 35 .............................. ATTAAAAATAATACTCCTAAAAAGTAGGAGGTGGT 285893 30 100.0 37 .............................. GAGAATATTGATAATTGTTTTGAGATGAATTAAAGAA 285960 30 100.0 34 .............................. TCATAGATGTAATTAAGCCAATTTCTAGCCATTA 286024 30 100.0 38 .............................. GTCAGTCCATTTAATTGTCTAAATTCATTTACCTTTGT 286092 30 100.0 35 .............................. GACTCTTTGGAGGAAGATATGGCATTTACTTTTTC 286157 30 100.0 35 .............................. CCGCCTTTAAATTAAATATATAAAAAGCATCCACC 286222 30 86.7 0 A...................A......GT. | C [286244] ========== ====== ====== ====== ============================== ====================================== ================== 18 30 99.3 36 CTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : TACAATAGTTGCAGATAAGGTATTTAGAGAATTTACGCTTACCAATAGAGAATGTCATGTAGCAATAAAAATGCTAGAGAATATATCCAACAAAGAAATAGCGGAACAACTTTATATATCTGAAGCTACCGTAAAGAAACATATTCAAAATATATATCAAAAGTTAGAGGTTTCTGATAGAGAGGGGTTTAGAAAGATTTACTTAGAAAAGGCACAAAAGGTAGATTTCTAAAAGCTGAAAAAAGCAAGTTTGTAATCTTATGAGAAGAAATTACGACTTGCTTTTATTTTAAGCAAAATTAATCATTCAATTATATAAATAAGATTTACCAGCTATATTTTGTCTGCGTATGGCAAAGCTCTTGAAAAATCAAGCTTAGGGCTAATAAATGAAAAAATGCTTTATGAGCACATTAAGGCTGGTAAAATTTCTTGTAATATATTGATTTTACTACGTTTATACTATATTATCTATAATAAAGAATGGCTATTTTTCAAGT # Right flank : TTTAATGGTTAATTCATAAGGAATGAATCTAAAATAGTGATTAAAGATGATGGGTAATATCAGTAACGTTTATATTTCAACAGATATGAATACTGTTTTGCTAAAAATTAATTTTACCAGCCTCATAAAAATTTAAATTCCTTTTAAAGCCTTTTAAATAGGGCTTTAAGAGGAATTTTTTTGAATAAAGTAAGATAATACTTGATACCTGGTAAAAAACCAAGCAATCTCTTTATTTTCAATGGATTTAAGGATATAATAAAAATAAGGAATGTTAATTTTACAATGGCTGAACCTTAACATAGGATGTATTTAAATTATAACCGTCCCCCATTGTTCCGCCATAGCTTTAGGCTGAACCTTAACATAGGATGTATTTAAATGATTTTCTGTACTTCCTACCCATCTTTTGAAACGGCTGAACCTTAACATAGGATGTATTTAAATTGTTATACCAGTAACTACTAACACAGGTAAAATGCGCTGAACCTTAACATAGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 12 286540-287749 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 286540 30 100.0 35 .............................. TATAACCGTCCCCCATTGTTCCGCCATAGCTTTAG 286605 30 100.0 34 .............................. GATTTTCTGTACTTCCTACCCATCTTTTGAAACG 286669 30 100.0 35 .............................. TGTTATACCAGTAACTACTAACACAGGTAAAATGC 286734 30 100.0 35 .............................. GAACGAGTATTGCCATTAAATGTTTCTGCAAAGGT 286799 30 100.0 36 .............................. TCCTAGTGGCAAGGGTATGAACGGCAATGTCTATGA 286865 30 100.0 36 .............................. AAAGCCATCTAGTTATAGCAATAGGTGCGACTCTTC 286931 30 100.0 35 .............................. GCCTTAAAAGCATAGTCACTATTTATAGGTGTCCA 286996 30 100.0 36 .............................. GATTTATAATTTCTCTGCTCTGCTTTAGTATTTCTG 287062 30 100.0 36 .............................. TTGTATAAGAACTTTAAAGCTATACCTGAAGGACTA 287128 30 100.0 36 .............................. TGCTTAAACATATCGGTGCCAATTCTAGCTATTTCT 287194 30 100.0 35 .............................. AAAGAAATCATAGAAGATGGGCTGCAGTGTATATG 287259 30 100.0 36 .............................. ATCCATGTTGTGCCGCCGCTGCACCAAATGTTTCTC 287325 30 100.0 36 .............................. TATACCGAAAAATTAGGTGCTATAACTGCACTAAAG 287391 30 100.0 37 .............................. TTATCCACTGGTATCGGAAGTACATTCCCATTTTTAT 287458 30 100.0 35 .............................. AAATAATCTGCCTTGGGCTTCAATATTGTTATCTG 287523 30 96.7 36 .T............................ ATAGCTTGATTTAATGTTTTAGCTCCATTCTGGAAG 287589 30 96.7 36 .T............................ GAACTTCAAGGACGGGACGCCAACCATAGTACGCGT 287655 30 93.3 35 .T..............A............. TCCCAATACAGTCTTTTAGTCATTATACCATCTTA 287720 30 73.3 0 AT.T...........GA..........GGA | ========== ====== ====== ====== ============================== ===================================== ================== 19 30 97.9 36 GCTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AGATGTATTTAAATGTCAGTCCATTTAATTGTCTAAATTCATTTACCTTTGTCTTTAACCTTAACATGAGATGTATTTAAATGACTCTTTGGAGGAAGATATGGCATTTACTTTTTCCTTTAACCTTAACATGAGATGTATTTAAATCCGCCTTTAAATTAAATATATAAAAAGCATCCACCATTTAACCTTAACATGAGATATACTTTAGTTTTAATGGTTAATTCATAAGGAATGAATCTAAAATAGTGATTAAAGATGATGGGTAATATCAGTAACGTTTATATTTCAACAGATATGAATACTGTTTTGCTAAAAATTAATTTTACCAGCCTCATAAAAATTTAAATTCCTTTTAAAGCCTTTTAAATAGGGCTTTAAGAGGAATTTTTTTGAATAAAGTAAGATAATACTTGATACCTGGTAAAAAACCAAGCAATCTCTTTATTTTCAATGGATTTAAGGATATAATAAAAATAAGGAATGTTAATTTTACAATG # Right flank : ATAATAATAAGTAATAAATTTGTTATCTATACTTCGATGCATAAATATAGTCTAAATTGGTAACTCCAACGTTGTTTATATATAAACAATGAGAAGCTTTTGATAGAAAATTTTTATTCTAAAGTATGGAATCAAGTGATAATATTGTATAGTAAGGTTAATTCAAAATTGCAAGTTATTGTGAATTAAGGGGGTATTTTATTATGAAATCTAAGGTTTTTTCTATAGGTGTTACTATTATTGTTATAATAACAACAATAGTAGTATTTAGGTTTTATCTCAAAGGAAATAGTGCAAGCCTTAATTGGATAAAAGATTTAAACTATGAAGAAAATCAAGTGCACGATATGTCGATTGGCTTTTTAAATCCTTGCCCTTCAATTCCTGTAATGATTGGGGATAAAAAAATGAAATTAGAATTTGATACAGGTAATGCAGAAGGTATATTTATTACAACGGCTATTAAAGGAAAAGTAGATTATGACATAACTGGAAAATCT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 13 292294-293695 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN879454.1 Desnuesiella massiliensis strain mt10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 292294 30 100.0 36 .............................. TTAGATTTCACGTCTATTACTAATTCTTTTTCGTTG 292360 30 100.0 36 .............................. TACCATGTTGGAGATATTGTTCTATCTTCATGATGC 292426 30 100.0 36 .............................. TTAAATTTTGTATTTGAAGTATATTAATTTTTTTAT 292492 30 100.0 36 .............................. TGCTTTAAATACCTCTTTTTATCTCTCCAAAAATCA 292558 30 100.0 36 .............................. TCTTCTCTATCACTTCCACCACTGGATGGTTCTGTG 292624 30 100.0 35 .............................. TATATTTAAAATTTTGCTTCTCATAGCTATAACTA 292689 30 100.0 36 .............................. ATCATAGCGAATAAGGAGGTGCCAAAATTGAATAAA 292755 30 100.0 35 .............................. ATGGCATATATGTACGACCTTGCAAATGGCAAACA 292820 30 100.0 35 .............................. TAAACTCCCCATTTTATTGGTCTTTGTAAGTTTGA 292885 30 100.0 36 .............................. AAGCTTACAGCCTTACCTTTTCTCATAATCTCTAAG 292951 30 100.0 35 .............................. ATTAAATAAACTTTCAAATCTTTATTTTATGTGTG 293016 30 100.0 35 .............................. TATGGAGGGATTAAATTATAAAGTAGCATTTATGA 293081 30 100.0 34 .............................. TGGCTTCCTCTTGCTCTATTATGCCTTATAGTGG 293145 30 100.0 36 .............................. ATTAAGTATAATATTTGGTCTTGATATTGCAATAAA 293211 30 100.0 36 .............................. ATTCTAGTGTTGGTTGTCTCCTCATTATCAGTTAAG 293277 30 100.0 35 .............................. AATTAAGAAATTGATAGCCTTATTAACTACAGTAG 293342 30 100.0 34 .............................. AAAAAGTTGAATTAACCAATGATGAAATGAAGTT 293406 30 100.0 35 .............................. AAAATGGTCTGTTTGAAGTAGCTATAAAGCTAGAA 293471 30 100.0 34 .............................. GACTTAAGTAGTACAGGAGCTATAGGATTAGAAA 293535 30 100.0 36 .............................. TTAGGAACTTTTGATGTGTCTGTATCCCATACTATA 293601 30 96.7 35 ................G............. TGTATTCTTAGAGGATAAGAAGCATATATGCATTT 293666 30 86.7 0 .............G..GT..A......... | ========== ====== ====== ====== ============================== ==================================== ================== 22 30 99.2 35 GTTGAACCTTAACATAAGATGTATTTAAAT # Left flank : TTTACTACAGATGATAGAGAGTATAATGATGGTAAAGGTAACATACAAAAGGTACAGTGGTCAGCAATTTGCAATAATTATAAAGATATGGACGGAATAAAGTATCCAACAGTTTTTAATGCGGTATGGCACTTAAAAACAGGAGATCTCGTATACTTTAATAGTAATGACATAAAAGTATACTATAATGTAATAAACTAAAATTATTATATTATGAACAGATATATTATTCTTTAACATAGCCTGAATCTAAAGGATATAGTCATGGATCATGTCAGTAACAGTTTATTTTCCAATGTATGAGTACTGTCTTGCTAAAAATTAATTTTACCAACCTCATAAAAAATTAAATTCCTTTAAAGTCTTTGAGATAAAGGCTTAAAGGGGATTTTTTGAATAAAGTAAAATAATGCTTGATGCCTGGTAAAAAATTAATCAATCTCTTTATTTTCAATGGGTTTATGGATATAATAGAATTAAAGAATGTTGATTTTACAGTG # Right flank : TTTATCATCAAAGAGTTGACCTTCAGTTGCCTCCCAGGAATCTCGTAGGTGAATATAAAAGATTTTAAGGAGAATTCTTAAGAGGATGGTAATGGAGCTTTATCAGCAAAACTTAAAGTCATGTATTAAGAACTACAGATTGAACAAAATCAGTTTGGTAGTTTTTAAATTTTTAGGAGTTTAAATAAGGAGTGAGTTAGGGTATAATAATTATAAGGAAAAGCAGAGATAGGTGATATTTTAAAATGAAAATAAAAAGAGAAATACATAATATACATGATAAAAGCTATAAAGATTTATTTTCTAACAAAGAGATTTTAGCAACTATGGTTCAAAGCTTTGTAAAAAGCTCTTGGAAAGAAGAAATTACAAAGGATAACATAGAATTAGTAAATAAGTCATATATTCTATCAGATTATGAAGAACTAGAATCTGATGTAGTTTATAAAGCAAACATAGATAATAAAGAAGTAATATTTTATATACTATTAGAGTTTCAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //