Array 1 150-362 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADLQV010000095.1 Nocardia cyriacigeorgica strain BJ06-0154 NODE_95_length_9552_cov_35.248382, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 150 30 90.0 31 ..........T...C.............G. TGGAGATCATGAGTAGGCGCCCACGATGGCG 211 30 96.7 31 .............................C CCGTTGGCCTCCGCCCCCACCTCAAGCGTGC 272 30 100.0 31 .............................. TGCGCGTCGGCACCAGCGTCCAACGGCTGGC 333 30 66.7 0 ...G...T.....GC...T..T.C.G..TG | ========== ====== ====== ====== ============================== =============================== ================== 4 30 88.3 31 ACGATCCCCACGCATGTGGGGGTGCTCCAA # Left flank : GAGCCTGCCCGCGCGGCAACCAGGACAAATCACCTGGGGAGATATCTGGCCATCCACGGGGAATCCGGTGGCCACCAGCGGGGCCTTAAATGGCCGCCCATGGGGAGGATGTCATGGCCGCTGACAGCCGAGCTGGCGGCGGCCGAGAAA # Right flank : GGTCATCGTGCTGACGACACCGAAACCCGTCGTCGGCACGCATGTGGTGTTCTCTTGTGTGGCGCCGTCGTGAGAATCGACGGTCGATTTCGGGATGCATGTCACGGACCAGGTCGGCGTAGGGCGGGATTGGCGCGACATTTGCGGTGTCGGATCGTAGGGCATCCCAATGCCATCGGGGAATACCCAGCGGGCACTGTCACCGTGTTCAATGGTTGAATTCGCCCGAAAGCCCTTCACCTGTAGGAGGAAAGTAGTGGCCGTGCGCTATCCGGAACACAAGCAGAAGGAATTGCTCGACCGAGTGAAAGCCTTGCTCAGCGAAGGTCACTCCATGAACTCGGCGTGTTCCGCGGTATCCGCGCGTGAGCGCGGATTGCCGACTACCAACACACTCTCGAAATGGGCGAAGGCGGCGCAGCTGTCCTCGACCGCCACCGACTCGACTCCCGCACCCGAGAAGCCCAGGTCTCCCATCGACACGGCTGCGGGGGACCCAC # Questionable array : NO Score: 3.46 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACGATCCCCACGCATGTGGGGGTGCTCCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCACGTGGGGGTGCTCCGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //