Array 1 30520-33007 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORZH01000244.1 Xanthomonas fragariae strain PD 2659 isolate PD 2659, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 30520 28 100.0 32 ............................ ACACTAGGCCCGTAGTGAGACCGGCGAGGTCG 30580 28 100.0 32 ............................ AACGTCTCTCCTCGTATACTATCGAATGTGTT 30640 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 30700 28 100.0 32 ............................ AGCTTCGAGGAACAAATCTGATCGCTGCAACG 30760 28 100.0 32 ............................ AATCCGACTATCTTTAAGCATAGTCTGTCCGG 30820 28 100.0 32 ............................ TGATGGTTGCGGAAAATAAAGGTCTGATCCTT 30880 28 100.0 32 ............................ TACGGGCATCACGGCGAAAGGCACTCAGCGAA 30940 28 100.0 32 ............................ AAGGAGCAGTGATAAACAATCAGGGTACCGCC 31000 28 100.0 32 ............................ TTGGTCGGCCCAGACAGCATTATTCATCATGA 31060 28 100.0 32 ............................ CAAATTAAGAAGTGGGATACCGGAGTAGTAGA 31120 28 100.0 32 ............................ TACTGTTACTGTGGGTTGGCCCGCACTCCAGT 31180 28 100.0 32 ............................ ATCCGTCCGGAGCACCACCGGAGTAGGTCCCC 31240 28 100.0 32 ............................ CGCACGTGCTGGCGGAGAAAGACTGCTGCAAG 31300 28 100.0 32 ............................ GAGCTGTGTGCACCAAAGTTGCCCTCCTCGGG 31360 28 100.0 32 ............................ GTACGGCAGCACCCGCTTTAGCTGTGCTGAGT 31420 28 100.0 32 ............................ ACGACCGCCTCATGGCTTCCTGCGTGCAGCCC 31480 28 100.0 32 ............................ GACGATCTTCTGGGCAAATACCCGCTGAAACT 31540 28 100.0 32 ............................ TGCGTGCAGCCCTAGCGCGACTAGGCTCAGCA 31600 28 100.0 32 ............................ TGCTATGGCAGAACGGCTCAGAGTTTCGTACT 31660 28 100.0 32 ............................ CAGCGCTACCAAGATGCAAGCTACCGACATGA 31720 28 100.0 32 ............................ AAAACCATTTGTGCCCGTAGAGCTTTCCATCC 31780 28 96.4 32 T........................... TCGACGACGCCGAAGAGGTTCGCCAGTGGTCG 31840 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 31900 28 96.4 32 .....A...................... ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 31960 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 32020 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 32080 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 32140 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 32200 28 100.0 32 ............................ ATTGCATACAAAGACGGCATCATCGCCTCGGA 32260 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 32320 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 32380 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 32440 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 32500 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 32560 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 32620 28 100.0 32 ............................ TGGCTGAAATTTACAAAGGGAGCAGTAACTCG 32680 28 100.0 32 ............................ GTGTCGGGATCTTCCTCAAATCTTGCAGGAGA 32740 28 100.0 32 ............................ TACTGCCACAAGAACCCCGGGATCGAGGATCT 32800 28 100.0 32 ............................ TGATGCACTCGGCATACGCGCCACCGGTGGAC 32860 28 96.4 32 ..........................C. GGGATGTCCGGATGCTGGCAGTGACGCGTTGT 32920 28 100.0 32 ............................ ACATCAAAGGCTGCTACTGAAGCTCTGGATGA 32980 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 42 28 99.7 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //