Array 1 50515-50148 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRUN01000007.1 Weizmannia ginsengihum strain M2.11 NODE_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 50514 32 100.0 35 ................................ AGTGTATGGGCGATTGAACTAAAAATTGCTTGTAC 50447 32 100.0 34 ................................ ACACCAGCTGCAACAGGTCCAACCGCTGCCAATC 50381 32 100.0 36 ................................ ATCATAAGGAATTGGAGGACATGATGGGTGTACATC 50313 32 100.0 34 ................................ TAAATTGCTATCAGCCAAAAAATCAGTTTTTTCA 50247 32 100.0 36 ................................ ACGCGATTGCATAGCATTAACGATGCAGTAATTGTC 50179 32 96.9 0 ..................A............. | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 99.5 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTGACTAGTGTCGTAATTTCTAATCCTACATTCCCAAGTTTTATTAATCGTTCAGAACATCCGCTAAGTCTTCGGCTTTCATGGGATACAACTAATCTTCCTAGATTTACACAGTGGAAAATGAACGGGGCAGGGATGAATGTATTAGGAATAGAGCCGGGAAATTGCTATGTAGAGGGGAGAAAAAAAGAAAGAGAACGCGGTTCGTTGGTGATGCTGGAGCCAGGTGAATCACGAACCTATCATCTTAAACTTGAAATCTTTTGAAAAGAATTAGACTCCTTTTATTTTAAAGAGCAGGCATAATCCCTTATAATGAAAATAACGACAAGTGCGAATGTATAGTGTACATAAATTTCACAGGGGATTCGCACCAAAATTTATTATGTTTTTTCCTAGTTATTGTAAAATTTTTGAATGGTTCCTTATGTTTATAAGGGAAATAGCGTATTTTTAGATTAAAAAACACGATTTTGCTGTACTATTATCTGAAAATCGCT # Right flank : GAAGAGATTATCCTATGTCAACAGATAAATTCTATTAGACGCTTACATTCCTTATTATTTTGATTGTAAGGGAACATTTAATCTTCACTAAGATATTCCCCAATTTAACACCATACTTAACCGCCATGCTCACGTTCATTATCCCCTCTTAATTAGTCTACTTTACATCTGATATTCAGTCTCTAAAGGAAGTGAGATACCTCTATTTATGAGCTCTAAAAAATATAAACAGTTAGTTAAAATAAGTTAATTCTCCGTAAAGCTTTGATGAAGTGGACTTTGCGGTCATTTTTTTATGCTATCTTTTTAGGTGAATTAGATGCTAAAAAGGAGGATGGAGAATGGCGCAGATTCAAATGAAACATGTTTCGAAGTCTTATCAGAAGCAGGCGGCTGTTTTAAATGAGATTAGTTTTTCGGTTGAAAAAGGGGAGTTCTTTATTCTTGTTGGTCCGTCTGGATGTGGGAAGAGTACGATTTTGCGGATGATCGCAGGGCTG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 13122-14806 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRUN01000031.1 Weizmannia ginsengihum strain M2.11 NODE_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 13122 32 100.0 34 ................................ ACCTGTTTTATAATCTCTTCTCCAACCGTCAAAT 13188 32 100.0 33 ................................ TTCATATAACTCAAAATATGACTGGACTAATTG 13253 32 100.0 34 ................................ AATAAAGTAATAATCCCTAACACTAAAGTGACTG 13319 32 100.0 33 ................................ CACTCAACGTATCGCCACTTTTAATTTTATAAG 13384 32 100.0 35 ................................ ACACCTGAATTGGCGATAAACGCCAGAGTGATTGC 13451 32 100.0 34 ................................ GACAATTTTTAACCTCGCATACTCTTTAGGCGTC 13517 32 100.0 34 ................................ TGATTGTGTCAGATACTGTTGTTGCTCGACAAAT 13583 32 100.0 33 ................................ TATTTTAATTTCTCTAAAGTCTGCTTTAGTACC 13648 32 100.0 35 ................................ GTATTTATAACTGGAGCGACGATACTTATGATTCT 13715 32 100.0 33 ................................ GTTCTGTTCCAATTTCCATTACCCCCTGTTTAA 13780 32 100.0 34 ................................ GGAGCGAATCCTAAATATCCAAGGTCTACTATAT 13846 32 100.0 34 ................................ CTTCGTGATAAAATCCGACTGTATAAACATCACC 13912 32 100.0 34 ................................ TGCATGACCAATGTAACTCATTAGCTGATTGGGA 13978 32 100.0 33 ................................ ACGAATTTACTTAAAGACATTTTGTATTTATCG 14043 32 100.0 34 ................................ ATCATCTACACCTCATGAATTTTGTATTTTTGCC 14109 32 100.0 34 ................................ CCATTAATATAGAAATCGTCAAGTATTCGCTACG 14175 32 100.0 35 ................................ CTACCTGATGGAGCGGACTTTGATAGTGACGAAGC 14242 32 100.0 33 ................................ TAAAGCAATTGTTGCTGTTTGTTGAGCATTGTT 14307 32 100.0 37 ................................ TTTATCTCCCCATACTGGAACAACAGTACACCATCCC 14376 32 100.0 35 ................................ CGTTGGCCATAAATTTACCAGTCGTAGTTATCGAC 14443 32 100.0 33 ................................ CTATGTGTTATTACTCTAGGAATCTATAGTTTT 14508 32 100.0 34 ................................ ACTTAGGAGAATGAATTGTCCATCATCCCCTGTT 14574 32 100.0 35 ................................ ACAATTTAATTTTATCTCATCACCAGGATATGCAA 14641 32 100.0 36 ................................ TCCGTGTCATCCAACGCTGCACGAATGCTGTTGGCA 14709 32 100.0 34 ................................ TACTTTTGCTGGTATGTCTGCTTTGTCTACGTCA 14775 32 96.9 0 .....................C.......... | ========== ====== ====== ====== ================================ ===================================== ================== 26 32 99.9 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TTGGATGAGTATCCACCTTTTTTATGGAAGTAGGTGTAGTAGTGCTAGTATTAATTACGTATGATGTTAGCACTGTTAGTAACAGTGGTCAAAAGCGATTGAGGAAAGTTTCAAAGCTATGTCAAAATTACGGACAACGAGTCCAAAATTCAGTATTTGAATGTATTGTAGATGCTGCGCAGTTTGCAACATTAAAAATTGAGCTTACAAATATTATTGATGAAAATCAAGATAGTCTTAGATTTTATCAACTAGGTAATCATTATAAGAATAAGGTAGAACATATTGGAGTTAAACAATCAATTGATGTGGAGGGGCCTTTAATTTTTTAGTGCGAAAGTAAAGTGCACATAAATTTCCTAGTATATTCGCACCTGAATTTTCATGTTTTATTTCCAATTTTTGTTATATTTTTATTAAGTTCTTTACTTTAGTAAAGAAAATGGTGAGTTTTTAATCAATTTTTTTGTAATGTTGAATTGTTTTGATTAAAATTCGCA # Right flank : TGAGGTTAAATATAATAGTTTCAAAGAGCTGTTAGGTTGCATTAAGTTACATAGAGATTATGAGTAACAGTTTAAGAAGTATGACTTTCTATGTTAGCAATTATTAAGTTTCAGCCTTGTACTTGAATATTAAGTTAAATTACATCATTTAAACTTAATGACTGTTAGAAAATTTTAAATGCGATTCAAAAGTTCATCGGTTTTAAAGCACTTAATACAGACGAAAAAGTGGGAAGAAATTAATTTCATCCGATACAGCTATTGGTAGTTCATTAAAATGGAGGCACTAGAATGTATAAGTAAGTTTGGACCATTTTTATATGCAGGCTGCAGCTTTTTCCCCATCTTCCGTTCTTCGATGAACGAAAGGATACTCTCCTCCTCCATCAGATCAAGACCGACACTGTTTGTACGGCTATTGCACTATCAAAGAATTTAGTGAGGAATAACCTACTCTAAGTATTTCATTCAATTATTTGCCTATAAAGTAAAGTGACGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //