Array 1 7679-6651 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTVO01000020.1 Ruminococcus sp. AF31-14BH AF31-14BH.Scaf20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 7678 32 100.0 38 ................................ GTGACCGGCCACATTGGGACTGAGACACGGCCCAAACT 7608 32 100.0 33 ................................ ATTATACGGACCATTCTATCAGATTGCCAGTGC 7543 32 100.0 33 ................................ GTGTACATCGTTACCAGGCAGCGCACGCTTTCC 7478 32 100.0 34 ................................ TCTAAACCTACCCTTTCTGCGGCGGCAGCAGAAA 7412 32 100.0 35 ................................ ATTAAGTACCCCGGAAGGCGAACATTTCAAGTACA 7345 32 100.0 35 ................................ AATATCTTAATCGAGTATTAAAATGGGGCAGAATC 7278 32 100.0 33 ................................ ATTCATTCCATGTCAAATGTTTCTTATCCATCT 7213 32 100.0 34 ................................ GTTGATCCAAGGTATGAAGAATTGTATGGATATC 7147 32 100.0 33 ................................ ATCAAAGTTTTCTCCAACAGAGTTTTGGGAAAG 7082 32 100.0 35 ................................ AAGGAGAATGGTGATGGAATATGTAGGACGAGAAG 7015 32 100.0 34 ................................ TTGCTTTATTTGTTCCGGCTGACTCTACGGTTCC 6949 32 100.0 36 ................................ ATCCGACGGACAGCGACCAGGAAACCGGTTCTTATC 6881 32 100.0 34 ................................ AAGGAAGTTGCAGATATCAAAACATCTGATCAAT 6815 32 100.0 33 ................................ GATAAGGCAGTACGTGCAGTGGAAATGTGTCAG 6750 32 100.0 37 ................................ CTTGAAGAGTACGGTGTTAATCATCGTTGTAGCAATA 6681 31 71.9 0 TGGT..T....-...G...G....A....... | ========== ====== ====== ====== ================================ ====================================== ================== 16 32 98.2 35 GTCATCCTCTTCGTGAGGATGTGAGTTGAAAT # Left flank : AGATGAATACCCTCCGTTTTTCTGGAAGTAGGTGGAAAGATGTTAGTTTTGATTACATATGATGTAAATACTCAAACAGTAGCGGGAAGAAAACGATTGAGAAAAGTTGCAAAAGAATGTACTAATTATGGACAGAGAGTACAGAATTCGGTATTTGAATGTCAAATGGATGCAACCAAATGTAGACAAGTAAAAAATATTTTAGAGAACATTATAGATAAAGAGGTAGATAGCCTTAGATTTTATTATCTGGGTGAAAAATATAAAAATAAAGTAGAGCATATTGGTGCTAAGCCTGGTTTTGATGTTAAGGATACGTTGATATTCTAGTGCGAATGATAAGTGCACATAAATTTCCTAGGACATTCGCACCAAAAAAAGGAGAAAACTAGGCTTAAAAATATATGTGAAAATGAAAAAAGATATCAACAATAGATATAAAATGTTTATTGTTGATATAATATGCGATTTTAAACAGATTATTTTTGTTTAAAATTGCT # Right flank : ATCCTTGATAGTCTTTCTCAGCTTCGCGCGAAGGAGCTACTATTATACATCATTTAATTTGAATATTAAACTCAATTATCGAAATTTTAAAGGAAATTTTTACATGTGTTCTTAGAAAAAATGAACAACACCTAGTAGTCTCCCCGATTTTTATATGGTATTTGAATGTAGAATAAAGTTCCGCAGTAATAATAATAGATACAATTAACAACATAGATGATATCTAGATTTTAACTGTCAAATTCCTGATTTGGCTATAAAAGTATAGATGAAAAGTGATTTGAAATTTCATTTTTGAAAAATAAATACTATAATTAAAGAGCTGCTTGTCACTCCTATATAAACGCGGTATAATGAATTTATCAATAAGCAGTCTTTTTAAAGAACGAAAATAAAGTTATTTCACATAGTACTTTTTGATAAAATCAGAACTGCGGAAAAGGAGGACTCAAATATGAAGATAGACATGCACTGTCACGTGAAAGAGGGGTCCATAGACA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCTCTTCGTGAGGATGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //