Array 1 1107767-1108252 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP076522.1 Lactobacillus crispatus strain PMC201 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1107767	    36	 100.0	    30	....................................	AGTAGTCTCCAATTCAAAAGGTGCTTACGT	
   1107833	    36	 100.0	    30	....................................	AAGCACTTGAATCTTGTCCCTGCTAGGAAC	
   1107899	    36	 100.0	    30	....................................	TCGAATTTAGAAAAATCAACATTAACGCGG	
   1107965	    36	 100.0	    30	....................................	CCGTGAAAACGGCGTTTACATGCGTAAGAC	
   1108031	    36	  97.2	    17	..........G.........................	TATTAGCTTTTGCGGCG             	Deletion [1108084]
   1108084	    35	  80.6	    30	..ACC.A.C.G..-......................	TAAAGAAATAAATAATAGAGGTGTGAGGTA	CGT [1108091]
   1108152	    36	 100.0	    30	....................................	CCACTATCGCGCCTGGAATACCTGTTTTCT	
   1108218	    35	  83.3	     0	.....................-...G.AG.C...A.	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  95.1	    28	GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC	                              	       

# Left flank :   CAAGCGCAAAGCTAAGCCTAAGGCAGAGTTTCCAACTGAACAGTCGCTTGATGCTTTTATTGGCATTCAGGCAATGAGCTACAATGACCGTTATTTCAATCGAATTCATAAATGCTTTGGTCAGGTTCAGGACACCTTAGAATCCTACTTTGATTAAATAAATAATTAAAAAATCAATTTACGAGAAAGATCTATTTACACAAAAGATTTGACAGTTTCATGTTAACACCATATGCTATAATTGAAACAGTTCTTAAGATTCATCAAGAATATAATCTTGATAGTATTCCCGTGTTTTGTAATGTAGCTCATTACCTTGATGAAACACAGTTAAAAGAACTTAGTAAGATTGTTAGACAACTTAAATTGAAAATTATTTTAATTGAATTCACAGATAAGAAATATGGGGTAGCAGTCAAGGATGCTCAAGTTGCATATATTGATCGAGATCTTGTTGATTGGTATTAGACAATTGATTAAAAAGATATTATGAAATATCG
# Right flank :  CAGTAATATGCATAAATTTACAAATATTTTTCTGTAAATAAAAATCGCTCTAGAGAAACTCTAGAACGATTTTTGGACATACTTGATCTTAGTATCTATTATTACTTAGCGTAATCATCAATACCCAAGTGCTCCAAAATAAGTGCGGCAGTTTCTTCAATGGAGCGGTGAGCAACATTAATTACATAGCAACCTAATTTCTTATAAAGTGCTTGTGCTGATTCAAGCTCCTTGTTGATTGAATCCATATTAGAATAAGTAGTATCAGGATTCAAACCATAAGCGATCATTCTTTGACGTCTGATTTCGTTCAATACAGATGGATCGTTAGTCAAGCCAATAATCTTCTTAGGATCAATTTCGTAGATTTCTTTTGGAATGTGAGTTTCAGGAACAAGTGGTAAATTAGCTACCTTTAAGTTCTTATTGGCTAAGAACAAAGAAAGTGGAGTCTTAGAAGTTCTTGATACCCCAAGTAAAACAACGTCAGCTTCCAAGAA

# Questionable array : NO	 Score: 5.83
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,-0.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-17] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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