Array 1 107852-107016 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRGL01000017.1 Streptococcus pyogenes strain SST2088-1 Contig_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 107851 32 100.0 34 ................................ TTTTTGGCTTCGTTGTGTAACAAATCCAGTGCGC 107785 32 100.0 36 ................................ ATCGAATTAACAATTATTGCTTGATAGTAAAGTATG 107717 32 100.0 36 ................................ ATAACCAAGTTTTGTATAAATATCACAATCAGTCTT 107649 32 100.0 35 ................................ AGATTCGGCTAGATATTCCAAAAAATCGATAAAGC 107582 32 100.0 34 ................................ TATATAGTCAGCCACATACTGCGGTACTTCTGGT 107516 32 100.0 34 ................................ TAAATCACTAGTAATTGTATATTGTAATTTCACG 107450 32 100.0 36 ................................ TGCGTTTGTTGTTGGATCCTGCGAAAAAGATATCCC 107382 32 100.0 37 ................................ ACCAACTTGCTTTCCAATTTATCAATTTGGAGATAAG 107313 32 96.9 35 ..............A................. ATGTTATTTCTCCTCGATCTCGTCCAAAAGTCTTA 107246 32 100.0 34 ................................ TTTGGTTTAAGCTTAAGATTCACTACTCAATAGA 107180 32 100.0 35 ................................ GAATAACTCTCCATCTTCATCAAGTGACGGTTCGT 107113 32 100.0 34 ................................ ATTAGCACTGGTTATATTAAGTGCCGAGGAAAAA 107047 32 96.9 0 ...............................G | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 99.5 35 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCGATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : ATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTTTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGATAAAAAACTCTATTGGTATGGCATTGTCAAAACCTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //